Week #10 Flashcards
What are some of the common symptoms of influenza?
- fever, chills, cough, headache, muscle aches, fatigue, loss of apetite.
- Normal chest X-ray
- Acute infection lasting about 7 days or longer
What is the incubation period and infectious period of influenza infection?
- 1-5 days
- 5-6 days
How much does influenza cost Australia per year?
how many deaths worlwide are caused by influenza?
- $600 million
- 250,000-500,000 deaths
What is the linkage that the viral heamaglutinin makes with the _____ on non ciliated respiratory epithelium.
- SA alpha2-6 linkage to galactose
Viruse replicates in the upper and the lower respiratory tracts but mainly in the ______
- large airways
What is the cause of the influenza like symptoms due to cytokines
- Fever is caused by IL-1
- head and muscular aches casued by IFN
Early on influenza virus will infect the non ciliated epithelium but then goes onto infect the ciliated epithelium of trachea and bronchi, this can lead to secondary infeciton by which pathogens and can cause what?
- H. influenzae, Staph aureus, Strep. pneumoniae.
- Can cause death from bacterial pneumonia
What is the structure of the influenzae virus and to what virus family does it belong?
- Influenza is an enveloped virus with a genome comprising segments of single stranded RNA of negative sense
- member of the Orthomyxoviridae family
What are the three types of infleunza and what are there features
- Influenza A and B can infect humans and cause infleunza
- Type C can infect humans but is a minor human pathogen
- Type A also has subtypes
- Type A subtypes and B virus also have viral strains.
How many segements of genome does the influenza virus have and how is each RNP structured?
- 8 segments
- each segemnt is strucutred like a pan-handle
- each segment has 3 polymerase subunits for the RNA dependent RNA polymerase
What is the role of the following influenza proteins:
np
M2
NS1
- np is a nuclear protein capsid protecting each of the RNPs
- M2 is an ion channel
- NS1 is a protein that counters the effects of IFN
What is the role of HA and NA?
- HA binds to the Galactose and initiated entry into the host cells
- NA functions to snip of the SA off the galactose so that the virus particle may not re-infect the same cell when it leaves the cell.
Heamaglutin acts as a trimer and NA acts as a tetramer? true or false?
True
Type A virus has ___ different HA subtypes
and ___ different NA subtypes
- 16
- 9
What is the replication cycle of influenza virus?
- Viral hemagglutinin (HA) binds to receptor (sialic acid linked to galactose) on surface of respiratory epithelial cell
- Virus taken into cell by receptor-mediated endocytosis
- As the endosome becomes more acid the HA
changes conformation leading to fusion of viral
envelope with the endosomal membrane - The 8 viral RNPs escape the endosome
and go to the nucleus - Viral RNA replication and mRNA synthesis
- Viral RNPs form
- HA, NA expressed on cell surface after glycosylation in ER and golgi
- Viruses acquire their surface glycoproteins and envelope as they bud out of the cell
- Viral neuraminidase (NA) cuts sialic acid receptors from the cell surface so that newly budded virus won’t bind back to the dying cell
- Newly formed virus requires the action of tryptase Clara to become infectious
What is the role of the enzyme tryptase Clara?
and why is it so important for influenza infection?
- When a virus buds out of a cell it is not virulent until it has undergone cleavage by tryptase Clara
- The HA must be cleaved by tryptase clara and this enzyme is only found in the respiratory tract.
- this cleavage occurs so to expose hydrophobic residues required for endosome escape
Explain the two main types of immunity generated to influenza virus?
- CD8 cytotoxic T cells
- kils infected cells
- is broadly cross reactive due to the fact that it recognises internal viral proteins which are conserved across sub-types and strains-not between A and B though
- Antibody
- developing antibody to HA (and NA) speeds clearance of virus
- acts by inhibiting attachment (or release) of virus. Ab and C’ lysisof cells, promoting phagocytosis etc
- Pre-existing Ab will protect against infeciton by neutralising input virus
Explain the conceot of antigenic drift and drift
- drift is mutaitons accumulating in viral proteins due to the error prone nature of the RNA dependent RNA polymerase
- antigenic drift is when these mutaiton occur in the antigenic site of the HA or NA
- viruses with mutations that diminish binding of the Ab will be selected for
How many antigenic sites are there on a HA trimer?
and what would happen if all were mutated
- 5 sites
- an epidemic
What are some of the sites of vaccine based therapy to influenza virus?
- The HA to prevent entry
- or Ab to NA to prevent escape of the virus
What is contained within the influenza vaccine?
What kind of immunity does it induce?
What are some of its problems?
- Influenza A H1N1 and H3N2 subtypes and influenza type B and another Type B strain that is distinct
- inactivated preperation and so only induces Ab type defences
- Vaccine has to be updated every year due to antigenic variation due to antigenic drift
- Less than 70% effective and even worse in the elderly
What are some of the tagets of antiviral (influenza) drugs?
- Ion channel blockers inhibit the function of the M2 ion channel, preventing endosome escape of RNPs
- NA inhibitors block efficient release
What is the HA conformational change importnat for?
How do antiviral drugs that block the M2 ion channel work?
- H+ ions enter the endosome to acidify it and it causes the HA to undergo a conformational change and this allows fusion of the virus envelope with the endosomal membrane
- but then we need to acidify the viral particle as well so that the RNPs can escape
- The M2 ion channel on the sirface of the virus allows H+ ions to enter and this allows escape of the RNPs
- So anti-viral drugs inhibit viral escape from the endosome
What are the names of the two M2 ion channel blockers?
Amantadine
Rimantadine
What do relenza and tamiflu do? and how are they adminiterred?
- Relenza and Tamiflu block the action of the NA
- Relenza is adminiterred through inhalation
- Tamiflu is adminiterred orally there seems to be resistance to this drug
What is antigenic shift?
- Sudden appearance of a new HA influenza virus
- New HA must come from an animal
- No one has immunity so it results in a pandemic
- very rare
- bird viruses use alpha2-3 linkage to SA so must mutate this before they can infect humans as the receptors in the human respiratory tract are mainly alpha2-6 galactose
What is a way a new human subtype viruse can be created?
- Can be achieved through viral reassortment when a human influenza and a avian influenza infects a pig which has both alpha2-3 and alpha2-6 linked SA galactose in its respiratory tract.
- this can lead to new HA viruses using the human virus receptor that recognises SA alpha Gal
Swine flu H1N1
- H1N1 virus
- respiratory symptoms as in seasonal influenza; not systemic
- spread very rapidly despite best efforts
- overall not as lethal as H5N1
- greater ability to replicate in lungs than seasonal influenza
- deaths in younger people
- possibly somme immunity left over from those born before 1920 due to earlier seasonal H1N1
- Pregent women, obvese individuals and indigenous patients most susceptibe
Why is H5N1 so bad?
Why is it capable of systemic spread?
- No one will have immunity to it
- Has a potential for systemic spread because it has a different cleavage site that can be cleaved by an enzyme found in all cells.
- case fatality rate of 80%
What influenza viruses are currently circulating?
- Type A H1N1 (swine flu)
- Type A H3N2 (hong kong flu)
- Type B virus
How does asbestos cause lung disease and what form of lung disease is it?
- Asbestos causes interstitial lung disease due to exposure.
- progressive, diffuse inflammation and fibrosis of lung parenchyma causing disruption and destruction of the A-C membrane
- Gas exchange and mechanical defects with PaO2 reduced, increased A-a gradient, decreased lung volumes (restrictive ventilatory defect), decreased compliance and increased work of breathing
- Patients present with progressive exertional breathlessness and cough
- Clubbing, crepitations, perhaps cyanosis on examination
What would the cardiac finding likely be of someone with lung disease due to asbestos and pulmonary oedema?
What would be the likely pathophysiological causes of the pulmonary hypertension?
- Sinus tachycardia due to decreased stroke volumes
- right ventricular heave
- Loud P2 and 4th heart sound
- pulmonary semilunar valve sound and 4th heart sound is blood rushing into stiff or hypertrophic ventricle
- so most likely RV hypertrophy
- pulmonary semilunar valve sound and 4th heart sound is blood rushing into stiff or hypertrophic ventricle
- pulmonary systolic ejection murmur
- triscuspid pansystolic murmer
- means blood is being lost from ventricle into atrium due to valve incompetence. This is mostly likely due to the increased pulmonary pressure, the RV will dilate and this will cause valve incompetence
- Increased JVP with v waves
- elevated as increased RV pressure and increase RA pressure
Pathophysiological Causes of the pulmonary hypertension
- destructionof pulmonary capillaries
- the process of inflammation and fibrosis destroys the capillary bead and this leads to increased pressures
- spasm of pulmonary arterioles
What is the likely diagnosis of a patient with these symptoms:
non smoker, previously very fit
- 6 months of intermittent SOB
- “anxiety”
- No abnormalities on examination
- normal CXR and ECG
- Spirometry normal, DCO 80% predicted
- Brisk walk-no distress, pulse 135, SaO2 98% => 90%
- Oxygen saturation at 90% is bery low even for someone who is exercising
- Probably not airway disease as there is no wheezing
- probably not interstitial lung disease as there would be more crepitations
- Perhaps a pulmoanry embolism which has caused blood clot in thelungs
What can a ventilation perfusion scan be used for, and how does it work?
- Inject a radioactive substance into the blood and see if it will get lodged in any of the arterioles
- If the dispersal is even then there is no ventilatory mismatch
What is the effect of pulmoanry hypertension on right atrial and systemic venous pressures?
- They will be increased
- Pressure increases in right ventricle, right atrium and then venous pressure will rise and then this will lead increased pressure in the capillary bed and this can lead to peripheral oedema
What is the effect of increased systemic venous pressure on the systemic capillary bed?
- If severe:
- Peripheral oedema
- ascites
- pleural effusions
What are some of the causes of pulmonary hypertension?
- Mechanisms that increase vascular resistance (main category)
- vasoconstriction-low alveolar O2 (including hypoventilation)
- obstruction-embolism, primary pulmonary hypertension(uncommon condition)
- obliteration-arteritis (less likely), emphysema, pulmonary fibrosis
- Increased left atrial pressure
- mitral stenosis, LVF
- Increased pulmonary blood flow
- left to right shunts, high flow states, excess central volume