W1P2 Flashcards

1
Q

Antibiotics

A

Derivative produced by the metabolism of microorganisms that possesses antibacterial activity at low concentrations and is not toxic to the host. Also includes molecules obtained by semi-synthesis

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2
Q

Antiseptics

A

Compounds used for the external treatment of wounds (19th century)

  • Dakin’s solution (1915)
  • Isopropyl alcohol
  • Chlorhexidine
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3
Q

What are the two factors involving in choosing an antibiotic

A

Route of administration
Oral (po), IV, IM, topical

Dosage
May depend on weight, age (sexual maturation), body surface area

Route and dosage DEPENDS on WHAT you are trying to treat and WHERE in the body.
- Pharmacodynamics and pharmacokinetics

POPULATION
Age (Neonate, child, elderly)
 - Restrictions on use in various ages
Pregnancy
 - Restrictions (harm to fetus)
Renal or liver dysfunction
 - Routes of elimination

Site of Infection

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4
Q

Empirical Treatment

A

Need to know which bacteria are usually involved in a particular clinical syndrome
- and you use an AB that you GUESS will work best

Need to know the prevalence of resistance to a particular antibiotic locally – hospital-level or community-level… changes over time

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5
Q

What are the common potential pathogens in our Nose and Sinus

A

S.pneumoniae, GAS, S.aureus, H.influenzae

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6
Q

What are the common potential pathogens in our Throat/Pharynx

A

GAS

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7
Q

What are the common potential pathogens in our Lungs/Bronchi

A

S.pneumoniae, H.influenzae, S.aureus,

Klebsiella spp/other Enterobacteriaceae

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8
Q

What are the common potential pathogens in our Middle Ear

A

S.pneumoniae

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9
Q

What are the common potential pathogens in our Intestines

A

Salmonella, Shigella, E.coli O157:H7

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10
Q

What are the common potential pathogens in our Urinary Tract

A

Enterobacteriaceae

Enterococcus

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11
Q

What are the common potential pathogens in our CNS

A

N.meningitidis, H.influenzae, S.pneumoniae, Listeria

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12
Q

What are the common potential pathogens in our Eye

A

Haemophilus, Moraxella, N.gonorrhoeae, S.aureus, S.pneumoniae

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13
Q

What are the common potential pathogens in our Blood

A

anything. anYtHiNg

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14
Q

What are the common potential pathogens in our Wouds

A

S.aureus, GAS

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15
Q

What are the common potential pathogens in our Bone and Joints

A

S.aureus, GAS, Kingella kingae

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16
Q

Pharmacokinetics

A

what the body does to the drug

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17
Q

Pharmacodynamics

A

what the drug does to the body (therapeutic/toxic effects)

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18
Q

What are the Important Drug Parameters

A
Absorption
Distribution
Half-life
Protein binding
Elimination
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19
Q

***Which Antibiotics have such good bioavailability that po= IV availability?

  • What is the rate limiting step here?***
A
Clindamycin po = IV
Fluoroquinolones po = IV
Septra po = IV
Tetracyclines po = IV
Metronidazole po = IV
Linezolid po = IV

rate-limiting step:

  • GI tolerance
  • GI absorption (e.g. patient is nauseated etc)
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20
Q

Pharmacokinetics: what are the two ways antibiotics work?

A

a. Time- dependent AB
- conc INdependent: really doesn’t matter HOW much you give***
b. Concentration- dependent AB

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21
Q

Examples of Time- dependent antibiotics

A

Beta Lactams:

  1. Penicillins
  2. Cephalosporins
  3. Carbapenems

Just remember THESE^

Other: 
Vancomycin
Macrolides
Clindamycin
Tetracyclines
Linezolid
Quinipristin/dalfopristin
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22
Q

Concentration Dependent AB

A

Aminoglycosides
Fluoroquinolones
Metronidazole

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23
Q

Pharmacokinetics: Time-Dependent Activity

A

Activity of the antibiotic is dependent on the AMOUNT of time that is spent above the minimum inhibitory concentration (MIC) of the organism for that specific antibiotic at that specific place/tissue/organ.

Classic type of antibiotic class that uses this:
Beta-lactams
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24
Q

***Pharmacokinetics

Concentration Dependent activity***

A

Activity of the antibiotic is dependent on the CONCENTRATION above the minimum inhibitory concentration (MIC) of the organism for that specific antibiotic at that specific place/tissue/organ.

Classic type of antibiotic class that uses this:
aminoglycosides
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25
Q

What determines if the antimircrobial activity is Bacteriostatic vs Bactericidal?

A
Bacteriostatic vs. bactericidal:
Depends on activity of antimicrobial 
Inhibition of cell wall synthesis or protein synthesis = cidal
Changes in bacterial physiology = static
Depends on drug concentration
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26
Q

What are the antimicrobial Classes

A
B- lactam AB [penicillins and their derivatives]
Cephalosporins
Carbapenems and 
Monobactams
Glycopeptides
Macrolides and Ketolides
Aminoglycosides
Fluoroquinolones
Sulfonamides
Tetracyclines and Tigecycline
Lincosamides
Metronidazole
Rifamycins
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27
Q

Beta-Lactam Group

A

Penicillins
Cephalosporins
Carbepenems
Monobactam

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28
Q
  • Penicillins and their Derivatives are..
  • a part of which group?
  • Mechanism of action
  • Resistance
  • what is their pharmacokinetics
A

Beta-Lactam group: All have a β-lactam ring in their molecular structure

Mechanism of action:
Inhibition of cell wall synthesis by binding to penicillin-binding proteins

Resistance:
Inactivation of antibiotic (penicillinase, or β-lactamase) (e.g. most MSSA)
Mutated penicillin-binding protein (e.g.. MRSA)
Decrease in penetration of antibiotics

SHEILD against resistance: β-lactamase inhibitors are added to penicillins to “mop-up” β-lactamase enzymes (irreversibly bind to them)
TIME-DEPENDENT KILLING

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29
Q

Penicillins

  • What does it target
  • resistance
A

While penicillin did/does well against gram-positive organisms including gram-positive anaerobes

Resistance:
S. aureus started to become resistant to it
- specifically those that developed Penicillinase (β-lactamase specific for penicillin)

Gram negative enterobacteriaceae started to become resistant
- β-lactamases

Emergence of new (and resistant) pathogens such as Pseudomonas spp became apparent

Obviously things needed to change… elevated AB were created to address resistant strains

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30
Q

What are new penicillins created for specific bacterial species?

A

S. aureus targeting designs

  • Cloxacillin
  • (Methicillin)
  • Due to increased S. aureus activity = loss of anaerobic activity
  • Aminopenicillines gives Expanded gram negative coverage (i.e. against E. coli)
  • Ampicillin IV
  • Amoxicillin (Amoxil) po

Expanded gram negative coverage (esp. Pseudomonas aeruginosa)

  • Ticarcillin
  • Piperacillin
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31
Q

Penicillins and B-lactamase inhibitors

A

This combination makes them resistant to β-lactamases
- side effect: Diarrhea, due to β-lactamase inhibitor

BROAD SPECTRUM
All combinations are active against:
- S. aureus
- Most gram-positive organisms including
- Enterococcus and Listeria spp
- Most gram-negative respiratory pathogens (Haemophilus and Moraxella spp)
- Most gram-negative enteric bacteria
- Most anaerobes (gram-positive and gram-negative)

Timentin and Pip/tazo
- Active against ALL above BUT ALSO Pseudomonas spp

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32
Q

General activity of Cephalosporins on gram positive vs gram negative

A

Cephalosporins effectiveness for gram +
Great in 1st gen, gets worse then 5th gen is good cause it acts against MRSA

They are inverse in their effectiveness against gram positive vs gram negative :

  • Earlier gens: better at gram positive, nothing for gram negative
  • Later gens: better at gram negative, worse for gram positives
  • Generally are resistant to simple B lactamases
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33
Q

What are the Gram Negative EXCEPTIONS on the action of Cephalosporins

A

It has NO EFFECT on Campulobacter ssp
and

no effect on Pseudomonas EXCEPT Ceftazidime which works for pseudomonas in the 3rd and 4th generation ONLY

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34
Q

What are the Gram Positive EXCEPTIONS on the action of Cephalosporins

A

Cephalosporins don’t work against these gram +ve: ENTEROCOCCUS and LISTERIA … therefore need to use another Antibiotic

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35
Q

Carbapenems

A

BROAD SPECTRUM
Like BROAD SPECTRUM β-lactams/β-lactamase inhibitor combinations
- Gram-positives (MSSA), gram-negative, anaerobes
- Usually resistant to β-lactamases

Recent emergence of carbapenemases in gram-negative enteric rods
- Emerging problem

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36
Q

Adverse reactions
All β-lactams

  • Mild side effects
  • Serious side effects
A

Mild side effects

  • GI upset
  • Diarrhea (β-lactamase inhibitors; cefixime/Suprax)
  • Drug induced neutropenia

Serious side effects
- Seizures
ALL β-lactams lower seizure threshold**
Wide therapeutic window so pretty safe
Some lower the threshold more than others (e.g. imipenem)
- SO DON’T GIVE TO PEOPLE WITH MENINGITIS

  • Anaphylaxis
    If anaphylaxis with one penicillin, high risk of reacting to another penicillin – less risk with cephalosporins
    3% cross-reactivity between penicillins and carbapenems
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37
Q

Pharmacological key points
β-lactams

- Which cross the BBB

A

Which β-lactams cross the BBB appreciably?

Penicillin IV (high dose)
Ampicillin IV (high dose)
Third generation cephalosporins IV (high dose)
Cefepime
Carbapenems
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38
Q

Which β-lactams have activity against MSSA?

A

Cloxacillin po/IV (and methicillin)
β-lactam/β-lactamase combinations (po/IV)
1st and 2nd generation cephalosporins po/IV
- 3rd generation IV NOT that good – just OK
Cefepime
Carbapenems

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39
Q

Which β-lactams have activity against Pseudomonas spp?

A
Ticarcillin and Piperacillin (IV)
Timentin and Pip/tazo (IV)
Ceftazidime (IV)
Cefepime (IV)
Carbapenems (IV)
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40
Q

Which β-lactams have activity against anaerobes?

A

Penicillin (po/IV)
All β-lactam/β-lactamase combinations (po/IV)
Carbapenems (IV)

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41
Q

What are the 4 groups that beta lactams work against?

A

Staph aureus
E. coli
Pseudomonas
Anaerobes

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42
Q

Glycopeptides

- examples

A

Vancomycin

Teicoplanin

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43
Q

Vancomycin Action

A

TWO STEPS

  • Chain linking and
  • Cross bridging

“Inhibition of cell wall synthesis
Inhibit the the chain formation and the cross-linking of peptidoglycan”

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44
Q

Vancomycin’s antibacterial spectrum

A

Possesses ONLY Gram positive activity including anaerobic gram-positive
very good activity against clostridium difficile (oral treatment)

  • Vanco is the most effective against gram positive HOWEVER it works SLOWER. so in emerg/severe cases, you want to pair it with say a beta-lactam* for faster action.
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45
Q

Vancomycin biological absorption

A

BBB penetration, mainly with inflammation
Need higher levels to penetrate BBB, bone and cartilage, heart tissue
Need higher levels when dealing with MRSA

measure peak levels of AB to make sure it is enough to cross barriers.

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46
Q

Adverse Reactions of Vancomycin

A

Nephrotoxicity
Usually with accumulation (high trough levels)
when co-administered with other nephrotoxic drugs
Therapeutic drug monitoring to prevent this

When administered over short period (1 hr) [given too fast]
- Histamine release (Red-(wo)man syndrome) :
Flushing
Hives
Even hypotension

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47
Q

What are examples of Macrolides?

A
Macrolides
Erythromycin (IV/po)
 - Erythromycin estolate (po)
Clarithromycin (po)
 - Biaxin
Azithromycin (IV/po)
 - Zithromax
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48
Q

Macrolide spectrum of resistance

A

Essentially

Gram-positives:
S. pneumoniae (if S)
Group A Streptococcus (if S)

Gram-negatives:
Campylobacter spp
Bordetella pertussis

Atypical bacteria:
Mycoplasma spp, Chlamydia spp, Clamydophila spp

Non-tuberculous mycobacteria:
Clarithromycin, azithromycin

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49
Q

Do Macrolides cross BBB?

A

NO

so you can’t use them to treat meningitis

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50
Q

Biology of Viruses

A

Obligate intracellular parasites
Use host cell machinery to replicate
Contain nucleic acid core surrounded by a protein capsid (some with envelopes)
Attach to host cells by binding to receptors on host cell surface
Enter cell by endocytosis of membrane
Assemble new particles within host cell that are released during cell lysis or by budding

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51
Q

Latent Virus

A

i.e. Chicken pox when you are young can remain unproblematic

until you’re older and it re-activates, manifests as Shingles

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52
Q

What is Vertical Transmission

- Examples

A

In utero- from mother to baby

Fetus becomes infected in-utero in two different ways:
Maternal viremia and infection of placenta (e.g.: rubella, CMV, Parvovirus)
OR
Exposure to virus in birth canal (e.g.: HSV, HIV)

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53
Q

In arthropod borne diseases, what are examples of arthropods

A

ticks

mosquitos

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54
Q

What is the difference between aerosol vs droplet transmission

A

Aerosal: a suspension of fine solid particles or liquid droplets in air or another gas

Droplet Transmission: occurs when bacteria or viruses travel on relatively large respiratory droplets that people sneeze, cough, or exhale

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55
Q

Gastrointestinal Route of Viruses

- examples of GI viruses

A

Viruses shed in stool contaminate food or water subsequently ingested by a susceptible host (Fecal-oral spread)

Viruses must withstand GI tract (stomach acid, bile salts, proteolytic enzymes)
Enteroviruses
Hepatitis A
Norovirus
Rota virus
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56
Q

Examples of Transcutaneous Virus routes

A

Direct inoculation from insect bites, animal bites or from mechanical devices (needles)
Arboviruses (e.g.: dengue, West Nile)
CMV, Hepatitis B, HIV
Rabies

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57
Q

Arbovirus

A

Refers to VECTOR borne viruses, i.e. Mosquito viruses

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58
Q

Transmucosal Viral Route examples

A

i. e. sexual, genital or oral transmission

- CMV, Hepatitis B, HSV, HIV

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59
Q

What are methods of Diagnosis

A

Tissue Culture
Cell lines, embryonated eggs, suckling mice

Antigen detection
ELISA, Immunofluorescence

Nucleic acid detection
In-situ hybridization, PCR

Serology
IgM +, 4-fold rise in acute and convalescent sera

60
Q

RSV- Respiratory Syncytial Virus

A

SS RNA
G protein (attachment)*
F (fusion) protein*
Yearly epidemics

*what are ABs attack

Syncytial: the cells are clumped up

61
Q

RSV epi and presentation in newborns

A
75% of infants seropositive by 1 yr
**Bronchiolitis**
Coughing,  wheezing, dyspnea
More severe in newborns, prematures, infants with congenital heart diseases and chronic lung disease
Transmitted by respiratory droplets
62
Q

Rhinovirus

  • type
  • transmitted by
  • Incubation period
A
SS RNA
Many serotypes
“common cold”
Average person has one rhinovirus/yr
Transmitted by respiratory DROPLETS, contact
Incubation period 1-4 days
Most viral shedding in first 1-3 days
63
Q

Rhinovirus

- Secondary complications

A

Secondary complications: sinusitis, otitis media, asthma
Following infection , neutralizing antibody develops to that serotype
No vaccine exists

64
Q

Adenovirus

  • type
  • structure
  • Transmission
  • What can it cause
A

47 human immunotypes

DS DNA, non-enveloped (helps** survive the stomach acid), not affected by pH, bile or proteolytic pancreatic enzymes, very stable
GI route^

Fecal-oral and aerosol transmission
URI, LRTI, GE, keratoconjunctivitis, hemorrhagic cystitis (blood in the urine)

65
Q

Adenovirus

  • epi
  • clinical timeline
  • use in therapy
A

75% of infections before 14 yrs. of age
Most respiratory or gastrointestinal

Latency with recurrent/prolonged shedding
Modified adenoviruses suitable candidates for recombinant vaccines,
(Covid) or as vectors for gene delivery

66
Q

Coronavirus

  • type
  • epi
  • serogroup
A

Enveloped SS RNA
30% of common colds (before covid, previous strains)

Serogroup 1: HCV 229E
Serogroup 2: HCV OC43

Sporadic, URI, pneumonia

67
Q

SARS

  • type
  • year
  • isolation level
A

Enveloped SS RNA
SARS CoV
recombinant mammalian and avian coronavirus?

Emerged in Guangdong province of China late 2002-early 2003
Worldwide spread
- 8098 infected, 774 deaths

Isolation of virus:
- Level 4 Facility needed

68
Q

MERS-CoV

  • place of origin, year
  • transmission
A

Middle East beginning in 2012
Direct or indirect contact with infected camel
Limited, non-sustained human to human transmission
Nov 2019: 2494 cases, 858 deaths (34.4% case fatality)
83% from Saudi Arabia

69
Q

COVID-19, SARS-Cov2

  • date of origin
  • variants of concern
  • transmission
  • TREATMENTS
A

WHO declares Pandemic
March 11, 202

SARS-CoV-2 is a beta coronavirus (same group as SARS virus and MERS virus )
Variants of concern: Delta, Omicron
Transmission: respiratory droplet/aerosol

Vaccination
Treatment: Remdesivir, steroids , monoclonal antibodies, thromboprophylaxis

70
Q

Influenza Virus

  • type
  • 2 sig glycoproteins
  • Antigen shift
  • Antigenic Drift
A

SS RNA
Influenza A, B, C

2 glycoproteins:
HA (hemagglutinin) (H1, H2, H3)
NA (neuraminidase) (N1 N2)

Antigenic Shift (big changes in BOTH protein type )
(H1N1-->  H2N2)
- heralds a pandemic because it has changed enough for people to not have immunity to it

Antigenic Drift (the 2 or 1 of the glycoproteins stay the same but other components of virus changes

71
Q

Influenza

  • Symptoms
  • Transmission route
  • Secondary complications
A

Fever, myalgias, HA, cough
Transmitted by droplets
There are a lot of secondary complications, especially bacterial pneumonia

72
Q

Reassortment

A

The mechanism used by influenza to evade our immune system

  1. Can affect, birds pigs humans
  2. it can mix and mutate and hybridize [re-assort] in a bird or pig then come back to humans
73
Q

Influenze Treatment

- just know the main two

A

Interference with M2 (Amantadine):
Interferes with viral protein required for uncoating after endocytosis
Only for influenza A
Many side effects

Neuraminidase inhibitors (oseltamivir, (TamifluR) zanamivir):
Useful treatment and prophylaxis
74
Q

Influenza Prevention

  • types
  • Mechanism
A

Vaccination

  • Inactivated vaccines
  • Live, attenuated, cold-adapted vaccines (cause your nose is coldest part of your body)

Need yearly vaccination
Each vaccine has 4 circulating viruses

Mechanism:
Injected into the nose where it multiplies, when it invades further down the throat = it will die cause too hot

We get local immunity in the nose since influenza gets in through there

Influenza and vaccine only stays in nose!

75
Q

What are all the respiratory viruses cover (5)

A

RSV: respiratory syncital virus (infants)

rhinovirus (common cold)

Influenza
Covid, MERS, SARS
Adenovirus
Rhinovirus
RSV
76
Q

Herpes Viruses (HSV)

  • Type
  • examples of some
  • clinical timeline
A

DNA viruses

Herpes Simplex Virus 1, 2 (cold sores periodically is a reactivation of the herpes virus)
Varicella zoster virus
Epstein Barr virus
Cytomegalovirus

Establish latent infections, with reactivation
ubiquitous

77
Q

HSV

  • Transmission
  • Target site
  • Mechanism
A

Infection by direct inoculation of mucous membranes (mouth, eye, genital tract etc.)

Virus accesses nerve cell endings in epidermis
transported to the nerve cell bodies in peripheral ganglia to become latent

Reactivated virus travels down axonal processes

78
Q

HSV Manifestations

- sites of infection

A
Ocular infection
Oral infection
Genital herpes
Neonatal herpes [if mother has it and baby passes through vagina = can be deadly to baby]
Encephalitis
Disseminated herpes
79
Q

Antiviral treatments for Herpes Infections

A

Nucleoside analogs (acyclovir)

  • Analog of guanosine
  • Can be phosphorylated by herpes virus enzymes, and then incorporated into viral DNA as a chain-terminating nucleotide.

Cannot eliminate latency
Long term treatment for suppression

80
Q

Varicella

- Complications

A

Varicella Zoster Virus
generalized vesicular rash, fever (aka chicken pox)

Complications:
bacteria superinfection (esp. Group A Strep)
thrombocytopenia
cerebellar ataxia
encephalitis
81
Q

In which populations is Varicella MORE SEVERE

A

More severe disease in adolescents, adults and newborns
severe disease in immunocompromised
Reyes Syndrome
Fetal infection with embryopathy

82
Q

Varicella Mechanism of action

- Where does it establish latency

A
  1. Aerosols enter respiratory tract (90% transmission rate*)
  2. Replication of virus in regional lymph nodes, primary viremia, replication in liver and spleen
  3. Secondary viremia, virus transmitted to the epithelial cells of the skin and mucosa
    [so starts from core and spreads outwards]
    Characteristic lesions

Establishes latency in dorsal root ganglia, reactivates as zoster (shingles)

83
Q

Shingles

A

VZV—Zoster

Spread of virus to dorsal root ganglia
Zoster developing in later years along dermatome of the nerve from which the VZV was reactivated

There is a shingles vaccine for people around 50-60

84
Q

CMV

  • type
  • timelines of protein production
A

This is a type of herpes virus
DS DNA, enveloped

Viral transcription follows CMV infection of cell
Appearance of IMMEDIATE EARLY PROTEINS (1 hr)
EARLY PROTEINS appear after 6-8 hr
LATE PROTEINS produced after initiation of replication

85
Q

CMV

  • infection rate/epi
  • transmission routes
A

Ubiquitous: present, appearing, or found everywhere.
50-95% adults infected

Enter host through epithelium with persistence in hematopoietic and epithelial cells
Acquired early in life: perinatal, breast milk
Sexual acquisition
Congenital infection

86
Q

CMV

  • clinical presentations
  • most at risk group
A

Most infections asymptomatic
Could be mono-like syndrome
Latent virus with periodic reactivation in saliva, urine, blood

Immunocompromised have more significant infection

87
Q

EBV: Ebstein barr virus

  • type
  • route of transmission
  • targets which cells?
A

aka kissing disease

Large enveloped DS DNA virus
Exposure of mucosal surfaces to virus
Infects B lymphocytes and epithelial cells
Latent infection with persistence of viral genome in memory B cells

88
Q

EBV

  • Infection rate
  • age
  • group most at risk
  • Oncological potential
A

Infection rates 50-90% by adulthood
“infectious mononucleosis” infection in adolescence

Most at risk = In immunocompromised -can have B-cell immortalization and transformation
and Post-trasplant lymphoproliferative disease

Oncologic potential?
Hodgkin’s Disease,
Links to Burkitt’s lymphoma,
nasopharyngeal carcinoma

89
Q

What are the Herpes Viruses

A

Varicella
Varicella Zoster Virus
CMV
EBV

90
Q

What are the viruses associated with Gastroenteritis

  • Transmission
  • Treatment
A
Rotavirus
Enteric adenoviruses
Norovirus
Astrovirus
Calicivirus

Clinically all have similar presentations
Transmission by fecal-oral route
Supportive treatment only

91
Q

Rotavirus

  • Type
  • How many groups
  • Peak age of infection
  • season of increased risk
A

DS RNA, no envelope (acid-stabile, aka GI route, out through feceal matter) 70nm

A: most common, Re-infections with same serotype may occur

Peak age of infection : 6 months to 2 years
Most immune by age 4

Seasonal distribution peaking in winter

92
Q

Rotavirus

  • clinical features
  • physiological consequences
  • Detected by
A

Large number of rotaviruses in stool of infected child
Fever, vomiting, watery diarrhea, dehydration

Shortening and atrophy of small intestine villi
- Carbohydrate malabsorption

Detection
Don’t grow in tissue culture
Detect antigen by ELISA testing of stool
EM

93
Q

Norovirus

  • type
  • named after?
  • nature of outbreaks
  • most frequent in which age group
  • type of transmission
A

27 nm. Round, non enveloped calicivirus

Group of morphologically similar small round viruses (Norwalk, Hawaii, Snow Mountain)
Explosive outbreaks, incubation 1-2 days

Highly stabile in the environment

Most frequent in adult and school age children in outbreak setting
Perhaps second to rotavirus in causing diarrhea in children
Fecal-oral and aerosol transmission (vomiting)
shedding can last weeks after recovery
Short term immunity, but re-infection can occur

? Protection if blood Group B

94
Q

Norovirus

  • Symptoms
  • Treatment
A

Usually mild and self-limiting illness
Vomiting, nausea, abdominal cramps, watery diarrhea. Usually no fever
Symptomatic treatment

95
Q

Enterovirus

  • List 3 main types
  • Type
  • how does this virus spread
  • associated types of infection
A
  1. Coxsackie A (23), Coxsackie B (6)
  2. Echovirus (32)
  3. Poliovirus 1, 2, 3,
type: Non enveloped = feceal-oral spread
Small picoRNAvirus
SS RNA, no lipid envelope, acid stable
Fecal-oral spread
Replicate in GI tract

Spread of virus through blood to target organs
Aseptic meningitis, herpangina, hand foot and mouth, myocarditis, hemorrhagic conjunctivitis

96
Q

Echo Enterovirus, what does the name stand for?

A

Enteric Cytopathic Human Orphan Virus

enteric: came from stool
cytopathic: affects tissues
Human: came from human
Orphan: not associated with disease (from a child that was HEALTHY) HOWEVER we know know they ARE associated with illnesses, it IS. pathogenic one

97
Q

Poli

  • What type of Virus is it?
  • two types of vaccines developed
A

Type:
Enterovirus
3 antigenic types

Invasion of brain and spinal cord, destroying anterior horn cells- become dependent on “iron lungs”
last major epidemic in Canada in 1959

  1. inactivated vaccine (Salk) introduced in 1955 (IPV)
  2. Trivalent oral live vaccine (Sabin) introduced in 1962 (OPV)
98
Q

Polio Vaccine- IPV

A

Inactivated* Polio Vaccine
enhanced formulation with higher potency and more immunogenic than original
primary series will protect >99% of recipients
few adverse effects

99
Q

Polio Vaccines- OPV

A

Oral Polio Vaccine
Live attenuated strains of Polio 1,2,3
immune response similar to natural infection with mucosal IgA immunity
vaccine virus shed in stool 1-2 weeks

Cheap, easy to administer, effective***

associated with VAPP: Vaccine Associated paralytic Polio (1 case/2.4 million doses)

so back to giving intramuscular

100
Q

Rabbies

  • Which virus
  • Type of virus
  • Where is it seen
  • Which animals contribute and to what percent?
A

Lyssavirus: rod/bullet-shaped; RNA genome

Seen worldwide
- except Antarctica, and a few island nations

Worldwide animal rabies
Dogs 54%
Terrestrial wildlife (42%)
Bats (4%)

101
Q

Rabies

- How is it transmitted

A

Transmucosal transmission;

Salivary contact:

  • Bite, mucous membranes, existing wound
  • Respiratory tract

Bat caves

Incubation:
Days to years***
75% become ill in the first 90 days
- distance of bit from CNS (faster symptoms if bitten on the face)

102
Q

Rabies

- clinical presentation

A

Initial prodrome (lasts 4 – 10 days):

  • Subtle neurological changes
  • Tingling at bite site
  • Headache, myalgia, non-specific flu-like illness

They get serious symptoms only once it progresses to:
CNS infection (encephalitis)
1. Confusion, agitation, hydrophobia, aerophobia
2. Progressive flaccid paralysis

103
Q

Treatment of Rabbies

A

Used to be considered a lost cause once pt got meningitis

Milwaukee Protocol

  • 2004, survival of Wisconsin teenager bitten by bat
  • Drug-induced coma, Antivirals

Used since with limited success

Extremely high mortality rate

must focus on PREVENTION

104
Q

Rabbies Prevention

A

Pre-exposure prophylaxis:
- Human diploid cell vaccine (given to Vets, needs to be re-administered often)

Post-exposure prophylaxis:
First: IMMEDIATE WOUND CARE
- May cut risk by 90%
- Povidone-iodine
Second: Rabies Immune Globulin (40 IU/kg) into all the wounds
Third step: Human diploid cell vaccine (up to 5 doses)

Local reactions are common but systemic reactions (Guillain-Barré) are VERY rare

105
Q

Hemorrhagic Fever Viruses

  • What does it look like
  • Main examples
A

long, rod shaped, easily distinct

Ebola Virus
Dengue

106
Q

Ebola Virus

  • how serious is it
  • reservoir
  • Transmission route
A

Severe, often fatal disease in humans, primates
Natural reservoir unknown

Transmission from direct blood/secretions contact, contaminated needles
Person to person spread through direct contact with body fluids
Direct contact through broken skin or mucous membranes with virus-infected body fluid

[Named for Ebola River in Democratic Republic of Congo
First recognized 1976]

107
Q

Ebola Clinical Features

  • incubation
  • symptoms
A
Filovirus (filamentous shaped?)
Incubation 2-21 days
Fever, Headache,
 joint pains
diarrhea, vomiting
Rash, red eyes
hemorrhage [end stage]
108
Q

Dengue

  • Genus
  • Route of transmission
A

Type of Hemorragic Fever Virus

Genus: flavivirus

transmitted by MOSQUITO
- this vector has increased in population due to global warming it also found in central America. it has expanded it’s distribution

Symptoms:

  • Fever,
  • Rash
  • Muscle and joint pains
109
Q

Dengue

  • how many strains
  • Distribution
  • Epidemic vs Hyperendemic
A

4 strains.
Distribution: S. Asia, Africa, Caribbean, Southern US, Central America, South America, Pacific islands, Southern Europe

Epidemic (single virus strain)and hyperendemic (continuous circulation of multiple strains)

110
Q

Dengue

  • Type of virus
  • What are the THREE clinical scenarios
A

Dengue Virus
RNA flavivirus

  1. Dengue Fever:
    Headache, myalgia, arthralgia, rash (may or may not have a rash)
  2. Dengue Hemorrhagic Fever:
    fever, bleeding, thrombocytopenia, plasma leakage
  3. Dengue Shock Syndrome:
    circulatory failure

no rapid test, hard to do serology. so HARD TO DIAGNOSE right away. no treatment anyway

111
Q

Visibly what features of Tick tell you that they can cause Lyme disease?

A

only BLACK LEGGED Ticks cause lyme disease

112
Q

What is the bacteria in Ticks that cause infections?

A

Boreillia Burgdorferi

113
Q

Lyme Disease

  • Caused by
  • How is it spread
  • Where does it originate
A

Bacteria: Borrelia Burgdorferi

Spread to humans by deer ticks (BLACK LEGGED TICKS)

originates in rodents

Tick bites infected rodent, then bites human -> human contracts Lyme disease

stains gram NEGative

114
Q

Diagnosing Lyme Disease

A

do test at least 4-6 weeks after bite

Theres a screening test but you don’t tell patient that screening is positive until the confirmatory test comes back which will come in 5 days

it’s a two step process
if you get a neg, you stop. if you get a positive you send for second check. if it is positive THEN

you check for IgM
if IgM positive: RECENT infection
IgM negative: past infection

115
Q

Lyme Management

  • Oral vs
  • IV regimens
A

Oral regimens
Amoxicillin
Doxycycline – ONLY DRUG USED FOR PROPHYLAXIS AND TREATMENT
Cefuroxime axetil
Azithromycin for severely allergic patients (to beta-lactams)

IV regimens
Ceftriaxone
Cefotaxime

Treatment regimens are anywhere from 14 days to 28 (rarely 56) days depending on disease stage.

116
Q

Doxycycline and Lyme Disease

A

Doxycycline is not contraindicated any more in both prophylaxis and treatment of Lyme disease in children < 8 years of age
- No increased risk of teeth staining

Prophylaxis with doxycycline for children now is an option. Reserved for:
- Tick bite in an endemic area of
Quebec (or outside Quebec) just give right away to reduce ris kby 90%
- Tick attached for >24 hours
- GIVE WITHIN 72 hours after removal of tick bite
- NO SIGNS of Lyme disease
- No contraindications for giving doxycycline

117
Q

Testing ticks to identify Borrelia B presence

A

It is not recommended to regularly test any ticks for identification and if Ixodes scapularis to test them for Borrelia burdorferi PCR.

  • What will it change?
  • Testing is done for surveillance purposes only and will not affect your clinical approach

Basically you will give prophylaxis if NO SIGNS of Lyme disease in a recently bitten patient in an endemic area.

Prophylaxis is not recommended in all tick bite cases. In that case, watchful waiting by the parents/patients is recommended and seek medical advice if symptoms arise

118
Q

In which tick bites cases would you AVOID giving prophylaxis

A

a. Tick bite LESS than 24 hours ( not enough time for transmission)
b. if its already been 3 days since the bite. would already be in the incubation period. giving AB now would reduce symptoms but it will likely return later.

119
Q

What are the visible EARLY signs of Lyme Disease

A
Early Localized (3-30 days)
Erythema Chronicum Migrans
greater than 5 cm
NON itchy
NON painful

VS

Early Disseminated (3-30days)
MULTIPLE Erythema Chronicum migrans at sites AWAY from initial bite +/- asthenia and fever

AND sometimes

Bell’s palsy:  an unexplained episode of facial muscle weakness or paralysis

120
Q

What are the LATE signs of Lyme Disease

A

These are symptoms that arise LATER, like 1-2 MONTHS later

a. Cardiac disease Carditis, 1st-3rd blocks
b. Bell’s Palsy and Meningitis
c. Monoarticular arthritis (usually large joint (knee))

121
Q

Chronic Lyme Disease

A

This is FAKE NEWS

There is no medical evidence that persistent vague symptoms (fatigue, “brain fog”, nightmares, depression) are due to ACTIVE Borrelia bacteria once Lyme Disease is properly DIAGNOSED and TREATED.

Lyme Disease is not cancer and is treatable at ANY stage of diagnosis

…?Persistent inflammation (knee pain for example or headaches that eventually go away) versus psychosomatic disturbances versus NO Lyme Disease diagnosis

122
Q

IF you see someone with a tick hanging on them, what should you do?

A

you DO want to remove it ASAP, as if you can get it off within 24 hours reduces infection
HOWEVER, it needs to be done properly with tweezers, you have to make sure the HEAD of the tick is OUT

123
Q

***Antibacterial spectrum of MACROLIDES

A

Essentially:

Gram-positives
S. pneumoniae (if S)
Group A Streptococcus (if S)

Gram-negatives
Campylobacter spp
Bordetella pertussis

Atypical bacteria
Mycoplasma spp, Chlamydia spp, Clamydophila spp

Non-tuberculous mycobacteria
Clarithromycin, azithromycin

124
Q

Antibacterial Spectrum of Aminoglycosides

  • including…
  • excluding…
A

THINK:
- Gram-negative, gram-negative, gram-negative
Including Pseudomonas spp
-Except Salmonella spp, Neisseria spp

Some have activity against TB and non-TB mycobacteria

Paromomycin has anti-parasitic activity
- Giardia lamblia

125
Q

Adverse reactions of Aminoglycosides

A
Renal toxicity:
Associated with high accumulated levels
 - High trough levels
Increased if co-administered with other nephrotoxic drugs
Reversible

Vestibular and cochlear toxicity:
Associated usually with prolonged use
Tinnitus is the first problem sign
Irreversible hearing loss

for these two mentioned^ THERAPEUTIC DRUG LEVEL MONITORING REQUIRED

Muscular blockade:
Should be avoided in people with neuromuscular diseases
- Botulism, Duschenne muscular dystrophy, myasthenia gravis etc

126
Q

Fluoroquinolones

Which one do you have to remember***

A

Ciprofloxacin po/IV (Cipro)

Levofloxacin po/IV (Levaquin)
“The respiratory quinolone”

Moxifloxacin po (Avelox)

[Mechanism: Inhibition of bacterial DNA synthesis
DNA gyrase & topoisomerase II/IV]

127
Q

Effectiveness of Fluroquinolones from 2nd to 4th gen on

a. s. pneumoniae
b. MSSA
c. Enteric Gram neg rods
d. Pseudomonas spp
e. Atypicals

WHICH COLOUR STAIN for each?

A

a. s. pneumoniae: starts fair and increases
BLUE STAIN

b. MSSA: starts poor, but increases

BLUE STAIN

c. Enteric Gram neg rods: all gens are EQUALLY effective

RED STAIN

d. Pseudomonas spp: starts well, decreases in effectiveness

RED STAIN

e. Atypicals: all gens are EQUALLY effective. this one

DOES NOT STAIN because no membrane

128
Q

Fluoroquinolone bioavailbaility

A

oral = IV availability*

but you CAN’T take it with MILK

129
Q

Antibacterial Spectrum for Sulfonamides

- no activity against

A
It is broad spectrum 
Great against gut gram negatives
- you can treat UTIs
- good against chlamydia too (atypical)
Good gram positive activity EXCEPT No activity against Group A Streptococcus, and Enterococcus spp
130
Q

Bioavailability of Sulfonamides

A

PO = IV availability

131
Q

Antibacterial Spectrum of Cyclines

A

Tetracyclines
Gram negative enteric rods
Anaerobes
Atypical bacteria

Tigecycline [more broad spectrum]
Gram negative enteric rods
- Even those resistant to tetracyclines
- Multiresistant Enterobacteriaceae

Gram positive
- MRSA, VRE, Penicillin-resistant S. pneumoniae
Anaerobes
Atypical bacteria

132
Q

Availability of Cyclines

A

ORAL = IV availability

133
Q

*****Mechanisms of Action and Resistance for Clindamycin

A

THIS IS A TYPE OD LINCOSAMIDE

Inhibition of protein synthesis

Resistance:
- Similar to macrolides
Bacteriostatic time-dependent activity

134
Q

AB spectrum for Clindamycin

A

Think GRAM POSITIVE
and ANAEROBES

noooo gram neg coverage

135
Q

Clindamycin, Bioavailability

A

oral = IV/IM availability

136
Q

Adverse reactions of Clindamycin

A

Usually well tolerated

May cause moderate diarrhea

Associated with C.difficile colitis
like many other antimicrobials

137
Q

Flagyl

A

This is a type of METRONIDAZOLE

spectrum: remember ANAEROBES (gram positive AND gram negative)
- good against clostridium difficle

ALSO THINK: Antiparasitic activity (Giardia lamblia, Entamoeba histolytica)

138
Q

Which is the only AB you should avoid taking alcohol with?

A

Metronidazole/Flagyl

139
Q

Bioavailability for Metronidazole

A

PO = IV

140
Q

AB activity of Rifamycins

A

On their own, rifamycins induce RAPID resistance
- NEVER used alone to treat infections
Always with other antibiotics to buffer resistance

Can be used alone as prophylaxis
- Against developing meningitis from N.meningitides, and H. influenzae

141
Q

AB spectrum for Rifamycins

  • What are the MAJOR drug interactions
A

THINK:
Treatment:
- TB
- non-TB mycobacteria

Post-exposure prophylaxis:

  • N. meningitides (meningitis and/or meningococcemia)
  • H. influenzae (meningitis)

MAJOR drug interactions
- are metabolized in the liver and induce CYP-450 enzymes

142
Q

Adverse reactions to Rifamycins

A

Mainly GI
Nausea
Increase in liver enzymes

Skin rashes

Rifampin:
Orange-red colouration of body fluids (urine, tears)
May stain contact lenses

Rifabutin:
Bronze discolouration of skin
Violet-red colouration of urine

143
Q
  • **Nitrofurantoin

- USE

A

Only used for non-complicated cystitis treatment and UTI prophylaxis

**Therapeutic concentrations achieved ONLY in urine

THINK: treamtment of uncomplicated UTI/cystitis

144
Q

ABs specifically produced for multiresistant gram-positive bacteria

A

AGAINST MRSA AND/OR VRE

Oxazolidinones
- Linezolid

Streptogramins
- Quinipristin/Dalfopristin

Daptomycin

Ceftaroline (5th generation cephalosporin)
– only for MRSA (not VRE)

they all inhibit protein synthesis

145
Q
  • ***Linezolid
  • availability
  • ADVERSE reactions
A

PO = IV

Risk of thrombocytopenia
(esp. if prolonged treatment > 2 weeks)
reversible

Inhibitor of monoamine oxydase
Serotonin syndrome
 - Avoid SSRI
 - Avoid or limit tyramine-containing foods
A. Cheeses
B. Smoked and processed meats