Virology Flashcards
Poxvirus transmission
Resistant in environment (despite envelope)–>
Transmit via abraded skin, respiratory route (droplets), mechanical (fomites, insects, etc.)
Genus Capripoxvirus spp.
sheep pox
lumpy skin disease
goat pox
(all serologically identical)
Genus Caprivirus Epidemiology
endemic in SE Europe, Middle East, Africa, Asia
Generalized disease
Can spread between sheep/goats/cattle but often remain in respective host sp.
Mortality up to 50% in indigenous breeds, up to 100% in European breeds
Genus Caprivirus Pathogenesis and clinical signs
Infection by abrasion, aerosols, mechanical–> replicates locally in skin/lungs–> regional lymph nodes–> viremia–>shed from skin lesions and nasal/ocular discharge
Incubation ~ 1 week–> fever, edema of eyelids, conjunctivitis, nasal discharge, skin lesions, lung consolidation/hemorrhage
Genus Avipoxvirus spp., modes of transmission
Fowlpox virus, other avian poxviruses
Mechanical transmission by mosquitoes, aerosol transmission
Orf virus (scabby mouth, contagious ecthyma) Transmission, pathogenesis, maintenance in population
= contagious pustular dermatitis (worldwide)
Transmitted by direct/indirect contact (abrasions)- infectious in scab for months
Epitheliotropic- proliferates locally in epidermal keratinocytes–> wart-like lesions near lips, muzzle, feet, genitalia, teats
papules–>vesicles–>pustules–>scabs
Primarily in young sheep, maintained by chronic carriers
Myxoma virus epidemiology and pathogenesis
Myxomatosis = poxvirus disease of rabbits
Benign fibromas in American wild rabbits, severely degenerative in European species
Mechanical transmission by mosquitoes and fleas (not contagious)–>listless and febrile–> often death w/in 48 hours (survivors have sub-Q gelatinous swellings)
Mortality rate ~99% in wild rabbits w/ virulent strain
African swine fever (asfarviridae) epidemiology, pathogenesis
Infects Suidae and soft ticks
Persistent tick infection–> 1) sylvatic cycle- viremia in juvenile warthogs (little-no dz in African breeds)
–> 2) domestic cycle- up to 100% mortality due to diffuse hemorrhage from platelet damage and complement activation, fever (European breeds)
Persists in meat for months–>pigs can become infected from carcass of dead infected pigs
No neutralizing Ab made, no vaccine, risk of international spread in pig products
Herpesvirus epidemiology/pathogenesis
Labile (enveloped)–> spread by close or mucosal contact (e.g. droplets)
Lifelong latent infection in neural or lymphatic tissue with continuous or periodic shedding (reactivated in times of stress)
Copies DNA in infected neurons, no viral gene expression except latency associated transcripts (LATs- inhibit apoptosis)
Can be shed while sub-clinical or recrudescent (reemerging clinical signs)
Bovine Herpesvirus 1 (infectious bovine rhinotracheitis)
Pathogenesis, clinical signs
Respiratory infection by aerosol route--> viremia (dissemination)--> rhinotracheitis, vulvovaginitis, balanoposthitis (virus shed in semen), conjunctivitis, abortion, enteritis, nasal discharge, hyperemic nasal mucosa, dyspnea, coughing, focal areas of epithelial necrosis and inflammation Recovery 5-10 days Intensive environments (e.g. feedlots) morbidity ~100%
Bovine herpesvirus 2
Bovine mammillitis virus/ pseudo-lumpy skin disease virus
2 forms:
Mammillitis (localized lesions on teats)
Generalized nodules and necrosis
Bovine herpesvirus 5
Bovine encephalitis virus
direct neural spread via trigeminal nerve from nasopharynx–> fatal meningoencephalitis in calves
Equine herpesvirus 1
epidemiology, pathogenesis
Most important viral cause of horse abortion worldwide
Infection via respiratory tract–> respiratory and neural dz–> viremia and systemic infection–> endothelium of endometrial vasculature–> vasculitis–> infarction–> abortion
Aborting mare infectious for 1-2 days from reproductive tract, 2 weeks from respiratory tract
Minimize risk by keeping pregnant mares separate from other horses and in small groups by foaling date
Reduce latent infection risk by minimizing stress
Equine Herpesvirus 4
Equine rhinopneumonitis- similar to EHV1 but only acute respiratory dz
nasal discharge and lymphadenopathy in foals (esp. weanlings and yearlings)
Only ELISA can differentiate EHV1/EHV4
Equine Herpesvirus 3
Equine coital exanthema
Veneral alphavirus
Lifelong latently infected carriers
Spread by mucosal contact
Feline Herpesvirus 1
clinical signs and prevention
Feline rhinotracheitis
Acute respiratory dz (similar signs to calicivirus)- nasal/ocular discharge, sneezing, dyspnea, oral ulcers
Lifelong latent carriers
Inactivated and live attenuated vaccines available
Live vaccine can cross placenta in pregnant queens
Gallid Herpesvirus 1
Clinical signs
Infectious laryngotracheitis (young chickens) Acute respiratory dz- nasal/ocular discharge, sneezing, dyspnea, gasping/coughing Often hemorrhagic exudate w/ diphtheritic pseudo-membrane occluding trachea
Canine adenovirus 1 pathogenesis
Infectious canine hepatitis (4-9 day incubation)
Contaminated urine/feces–> nasopharynx/mouth/conjunctiva–> tonsil crypts/peyer’s patches–> viremia–> vascular endothelial cells–> hemorrhage/necrosis of major organs (esp. liver- inflamm., hepatocellular damage, failure)
–> 1) virus shed in urine/feces/saliva
–> 2) shock–> death
–> 3) Neutralizing Ab response–> recovery
Canine adenovirus 1
clinical presentations, diagnosis, prevention
3 syndromes:
1) peracute dz- 3-4 hours, found dead
2) acute dz- fever, vomiting, dysentery, collapse, petechial gums, icterus, may be fatal
3) mild or inapparent dz
Dx: Ag detection in urine (virus isolation, PCR)
- Ab detection- ELISA, HAI
Prevention: vaccine part of C3 protocol, CAdV2 vaccine cross-protective and safer than CAdV1 (no risk of corneal edema)
Canine adenovirus 2
Infectious canine tracheobronchitis
Localized respiratory dz (part of kennel cough complex)- bronchitis/bronchiolitis
Not systemic, doesn’t affect wildlife
Vaccine provides complete homologous protection against CAdV1
Equine adenovirus 1 & 2
EAdV1: found in young horses w/ or w/o respiratory dz
EAdV2: in lymph nodes and feces of foals w/ respiratory disease and diarrhea
Mostly asymptomatic or mild
Could be fatal for Arabian foals with SCID
Family Papillomaviridae pathogenesis
Infections through skin abrasions–>infection of basal cells in squamous epithelium–> clonal proliferation (delayed maturation)–> papilloma formation (finger-like projections)–>viral shedding
Often in young animals, usually regress after several weeks
Bovine papillomavirus
pathogenesis, neoplastic transformation, diagnosis
Transmission via fomites, sexual (venereal warts)–> squamous papilloma in mucocutaneous areas–> fibropapillomas (pedunculated) on udder, teats, head, neck, genitalia–> spontaneous regression after 1-6 months
Neoplastic transformation: BoPV + bracken fern poisoning (enzootic hematuria)–> neoplasia (BoPV2= bladder cancer, BoPV4= alimentary cancer)
- UV + BoPV–> ocular squamous cell carcinoma in lateral esclero-corneal limbus, nictitating membrane, or lower eyelid
Dx: direct observation, histopathology, PCR
Equine sarcoid
Presentations, behavior, treatment
Papillomavirus (BoPV implicated)- most common equid skin tumor
Head, limbs, ventral abdomen of 4+ y.o. horses esp. at site of previous scarring
Locally aggressive but does not metastasize
Transmitted by fomites, possibly flies
Possible presentations: occult, verrucose, nodular, fibroblastic, malevolent, +/- pedunculated
Treatment (excision) ineffective- recurrence common
Feline Panleukemia virus
epidemiology, pathogenesis, clinical signs, prevention
Highly contagious generalized systemic/enteric dz worldwide (1 serotype) Enters cats (often young as maternal Ab wanes) via oropharynx--> replicates in pharyngeal lymphoid tissue--> viremia--> mitotically active cells (intestinal crypt, bone marrow, fetal cerebellum/retina)--> incubation ~5 days--> bone marrow suppression, GIT signs, cerebellar hypoplasia (in fetus via transplacental transmission)--> shed in saliva, urine, vomit, feces (several weeks) Inactivated and live vaccines available
Canine parvovirus 2
Epidemiology and prevention
High morbidity and mortality in all Canidae 3 variants (2a, 2b, 2c) Vaccine protects against all variants but not 100% immunity- part of C3 given @ 6-8 weeks, 14-16 weeks, 1 year, every 3 years
Canine parvovirus 2 pathogenesis
Feco-oral transmission–> pharyngeal lymphoid tissue–> viremia–> replicates in intestinal crypt cells–> hemorrhagic gastroenteritis, vomiting–> virus shed in feces for 3-7 days after infection (persists in environment for months)
Mucosal collapse w/ contraction/fusion of SI villi–> malabsorption, hemorrhage–> dysentery w/ fetid smell (usually enough to make presumptive Dx)
Porcine parvovirus
epidemiology, pathogenesis, diagnosis, prevention
Worldwide reproductive failure, 1 serotype, stable in environment
Infection via oronasal route–> local replication in tonsillar lymphoid tissue–> viremia and transplacental transmission (takes ~15 days to reach fetus)
- <30 days gestation–> resorption
- 30-70 days gest.–> stillbirth & mummification
- >70 days–> stillborn, abnormal, or normal fetus
Dx: infected feti have high virus titer (PCR, HAI)
Prevention: exposing guilt or vaccinating before pregnancy induces immunity
Psittacine beak and feather disease
pathogenesis and clinical signs
Cockatoos, parrots, budgerigars
Replicates in basal epithelial layer–> basophilic intracytoplasmic inclusions, lymphoid depletion–> difficulty feeding and death
Feather changes: stunted pin feathers, bloody/sheathed/fractured adult feathers
Beak/claw deformities: broken, overgrown and shiny, delaminations, palatine necrosis
Porcine circovirus 2
Post-weaning multi systemic wasting syndrome
Progressive dz in 6-week old piglets- weight loss, enlarged lymph nodes, dyspnea
Chicken anemia virus
Shed in feces & feather dander–> transmitted by direct contact or fomites–> aplastic anemia, generalized lymphoid atrophy in 2-3 week old birds
Bluetongue epidemiology
Family Reoviridae, Genus Orbivirus
Non-enveloped RNA virus with >25 serotypes of varying virulence
Infects she, cattle, and goats in tropics/sub-tropics
Arbovirus- replicates in arthropod (Culicoides spp.) salivary glands & has extrinsic (in arthropod) and intrinsic (in mammalian host) incubation periods
Bluetongue pathogenesis
Infection from arthropod–> incubation ~1 week–> replicates in lymphoid tissue and endothelial cells–> viremia for 14-28 days–> spread when bitten by Culicoides spp.
Bluetongue clinical signs
Various vascular lesions: hyperemia of oral cavity (frothy/salivation), nasal discharge (variable consistency), cyanosis of tongue, hyperemia of coronary bands, edema of head/neck
Vary from sub-clinical to fatal (~2-8 up to 30% mortality), more severe in sheep than in goats
Pregnant ewes may abort or have lambs with abnormalities (hydranencephaly)
Bluetongue diagnosis and control
Dx: presumptive based on clinical signs or post-moltem findings, isolation, PCR, serology (ELISA), neutralization assay
Control: live attenuated vaccinations available (must know local prevalent serotypes), sentinel cattle herds
African Horse Sickness epidemiology
Same as Bluetongue but host species = horse
9 serotypes
African Horse Sickness
clinical signs
3 forms of febrile dz:
- Peracute pulmonary form (near 100% mortality): nasal discharge–> respiratory distress (pulmonary edema, pleural effusion)
- Subacute cardiac form: conjunctivitis, abdominal pain & progressive dyspnea, sub-Q edema (infraorbital fossa, palpebral conjunctiva, intramandibular, hydropericardium)
- Mild/sub-clinical dz in African donkeys and zebra
African Horse Sickness pathogenesis
Infection from arthropod vector–>incubation ~4-9 days–> replicates in regional & other lymphoid tissue–> blood cell-associated viremia w/ onset of fever–> heart, brain, lungs, endothelial cells
African Horse Sickness
diagnosis and control
Presumptive Dx based on clinical signs, rapid death, typical lesions (supraorbital edema, frothy nasal discharge, respiratory distress), seasonality
Virus isolation or RT-PCR from washed RBCs
Control: attenuated polyvalent vaccine available, predict outbreak through knowledge of vector life cycle
Genus Rotavirus pathogenesis
Feco-oral transmission (food, water, etc.) in 1-8 week old calves–> incubates ~12-24 hours–> capsid VP4 cleaved by chymotrypsin in epithelium of apical tips of SI villi–> severe enteritis, secretory diarrhea (“white scours”), inappetence, depression, dehydration (–> death)–> high titer shed in feces, persists for months, resistant to disinfection, small infective dose required
Rotavirus control
Improved hygiene
IgG in colostrum/ lactogenic immunity (vaccinate dam)
Prevent dehydration and electrolyte imbalance
Foot and Mouth Disease
epidemiology
Family Picornaviridae, Genus Aphthovirus
Highly contagious dz of cloven-hooved farm animals (NOT horses)
High morbidity, low mortality- huge production losses
Multiple host spp. and modes of transmission
7 serotypes (O, A, C, SAT1, SAT3, Asia1) with little cross-tolerance
Small infective dose, rapid replication
Pigs = amplifier host, sheep often inapparent/persistent carriers
FMD pathogenesis
Oral transmission by aerosols or fomites–> incubation period 2-8 (up to 14) days–> shedding up to 4 days before onset of clinical signs
FMD control:
vaccination (inactivated) vs. slaughter
Vaccinated animals can be carriers- serologically identical to diseased
FMD-free w/o vaccination = easier to trade than if vaccinated; serological test and slaughter (positive and in-contact animals)
Endemic FMD- eradication campaign w/ ring or blanket vaccination
FMD clinical signs and diagnosis
Fever, inappetence, depression, decreased production, excessive salivation
Vesicles on tongue and oral mucosa, interdigital region, coronary bands, teats, nasal mucosa/muzzle
Vesicles coalesce/rupture–> large ulcers
Myocarditis–> sudden death in calves and piglets
Dx: sample from epithelium with vesicles, Ag detection by ELISA, culture, PCR
Eastern & Western Equine Encephalitis
Family Togaviridae, Genus Alphavirus- enveloped RNA viruses
Maintained in mosquito-passerine bird cycles (neither show dz)
Dz outbreaks when sufficient vectors spill over to horses and humans (dead-end hosts)
Seasonal peak in late summer after heavy rainfall
Venezuelan Equine Encephalitis epidemiology
Outbreaks when vectors spill over to horses and humans
Viremia in infected horses = sufficient titer to be amplifying host for new vectors
Enzootic/endemic cycle: between small mammals and Culex spp.
Epizootic/epidemic cycle: virus mutates to enter cycle between mosquitoes and large mammals
Equine Encephlitidies pathogenesis
Mosquito bite–> replication in local cells–> regional lymph nodes–> primary viremia–> replicates in muscle, CT, endothelium–> secondary viremia–> CNS invasion–> neural necrosis, mononuclear infiltration, perivascular cuffing, interstitial edema (incubation up to 9 days)–> mild fever and depression to fatal encephalomyelitis with CNS signs (photophobia, head pressing, etc.)
Equine Encephalitidies diagnosis and control
Dx: viremia transient- difficult to isolate in blood
- serology (IgM ELISA), neutralization on paired sera
Control: vaccination available in endemic areas
- Live VEE, inactivated WEE & EEE
- Vector ctrl- insecticides, repellents, sentinel chickens
Japanese encephalitis epidemiology
Flavivirus endemic to SE Asia, India, China
reservoir = water birds
amplifying host = pigs (reproductive failure)
Spillover to horses and humans (dead-end hosts)–> severe fatal encephalitis (fever, lethargy, hyperexcitability, recovery or death)
Maintained in mosquito-pig life cycle
Post-mortem serology for Dx
West Nile Virus
epidemiology, dz processes, prevention
Mediterranean, Asia, Africa, US (warm/wet climates)
Urban bird-mosquito cycle
Bird = amplifier–> blood titer sufficient to be picked up by more vectors
Fatal encephalitis in horses, hemorrhagic fever in humans
Vaccine: killed virus in 2 doses w/ annual booster
- no IgM, high levels neutralizing Ab after 2nd dose
Murray Valley Encephalitis Virus epidemiology
Victoria and SA
Arbovirus (vectors = Culex annulirostris, C. australicus)
Maintained in herons, cormorants, darters
Often sub-clinical (1 in 800 severe dz)
Transient viremia- hard to detect (serological & virological)
Bovine viral diarrhea virus
different disease presentations (non-pregnant)
Acute- BVD
Chronic- persistent mucosal dz (profuse watery diarrhea, ulcers, fatal w/in weeks)
All ages susceptible
Fever, immunosuppression, leukopenia, diarrhea, naso-ocular discharge, ulcerative stomatitis, decreased milk production
BVDV
pathogenesis (pregnant)
Transplacental transmission
- <80 days: abort, resorb
- 80-125 days: cytopathic strain–> lesions/weakened or dead calves, non-cytopathic strain–> tolerance to virus
- > 125 days: active immune response, develop Ab and survive
BVDV diagnosis, prevention, control
Dx: difficult- PCR, isolate virus/detect Ag, immunofluorescence, serology
Killed and live vaccines available but not fully protective
Must remove persistently infected animals to eradicate
Classical swine fever
epidemiology, pathogenesis, clinical signs, prevention
Contagious, exotic dz
Virulent, moderate (chronic dz), and low virulence (decreased fertility) strains
Ingestion/inhalation due to direct contact–> replicates in tonsils–> lymph & endothelial cells–> hemorrhages, DIC, thrombosis (2-10 day incubation)–> fever, hyperemia, purpura, convulsions, posterior paresis, paralysis, tremors, death wi/in weeks
Effective live vaccine available
Influenza A pathogenesis
Aerosols (or feco-oral for birds)–> spread through respiratory tract in 1-3 days–> fever w/ necrosis of epithelial cells–> secondary bacterial infections may–> bronchopneumonia
Influenza A epidemiology
Orthomyxovirus- enveloped, RNA Subtypes: HA(16+) + NA(9) - external Ag^ do not cross-react - strains (usually geographical) w/in subtype may cross-react Seasonal Shed ~8-10 days (often sub-clinically) High morbidity, low mortality Common interspecies transmission (horse, human, bird, pigs)
Influenza A
common clinical signs
Cough, sneezing, nasal discharge, fever, loss of production (eg low virulence avian influenza)
Retrovirus
envelope & genome characteristics
Envelope has peplomers (glycoprotein spikes) (labile--> require close contact) Diploid RNA genome w/: - gag--> structural proteins - pol--> reverse transcriptase - env--> envelope protein
Rapid mutation of retroviruses
RT makes frequent errors–> inherent high rate of mutation
Concurrent infection w/ 2 retroviruses–> high rate of recombination btwn viruses (partially due to diploidy)–> different peplomers = ability to bind new cell types–> potential for jumping species