Unit Two Flashcards
true or false: The tertiary structures of myglobin, α-hemoglobin and β-hemoglobin are nearly identical, therefore it is expected they will have nearly identical primary structure.
false
In the ____ form of Hb, the iron atom is out of the plane of the porphyrin ring.
T
The Bohr effect describes a lowered O2-affinity of Hb when the pH _____.
decreases
Which of the following would be an example of a conservative amino acid substitution?
Arg replaced with Lys
Asp replaced with His
Gly replaced with Ser
Glu replaced with Gln
Arg replaced with Lys
Which of the following statements about the T to R transition of Hb is FALSE?
A) The change in tertiary conformation results in a change in quaternary structure
B) His F8 residue moves between two Thr residues when O2 binds
C) Binding of O2 induces formation of a 6th coordination with the heme iron.
D) Binding of O2 pulls the iron atom into the plane of the porphyrin ring.
His F8 residue moves between two Thr residues when O2 binds
During the T to R transition of Hb, Fe2+ drags the F-helix due to an electrostatic interaction with which amino acid residue?
His F8
Which of the following statements regarding the effect of 2,3-BPG on Hb is FALSE?
A) BPG does not bind to Hb in the R state
B) BPG stabilizes Hb in the T state.
C) Fetal Hb binds O2 with lower affinity than that of adult (maternal) Hb.
D) In the absence of BPG the affinity of Hb for O2 in tissues is too high.
Fetal Hb binds O2 with lower affinity than that of adult (maternal) Hb.
Highly active muscle generates lactic acid by respiration so rapidly that blood passing through the muscle drops in pH from 7.4 to 7.2. Would Hb bind O2 with higher or lower affinity at 7.2 than it does at pH 7.4?
lower
An allosteric interaction between a ligand and a protein is one in which
binding of a molecule to a binding site affects binding properties of another site on the protein
When oxygen binds to a heme-containing protein, the two open coordination bonds of Fe2+ are occupied by
one O2 molecule and one amino acid atom
In the binding of oxygen to myoglobin, the relationship between the concentration of oxygen and the fraction of binding sites occupied can best be described as
hyperboplic
Which statement about protein-ligand binding is CORRECT
A) The larger the Ka (association constant), the weaker the affinity
B) The larger the Ka, the faster is the binding
C) The Ka is equal to the concentration of ligand when all of the binding sites are occupied
D) The larger the Ka, the smaller the Kd (dissociation constant)
E) The Ka is independent of such conditions as salt concentration and pH
The larger the Ka, the smaller the Kd (dissociation constant)
Myoglobin and the subunits of hemoglobin have
A) very similar primary structures, but different tertiary structures
B) no obvious structural relationship
C) very similar primary and tertiary structures
D) very different primary and tertiary structures
E) very similar tertiary structures, but different primary structures
very similar tertiary structures, but different primary structures
In hemoglobin, the transition from T state to R state (low to high affinity) is triggered by
oxygen binding
Which statement is NOT correct concerning 2,3-bisphosphoglycerate (BPG)?
A) It binds at a distance from the heme groups of hemoglobin
B) It is an allosteric modulator
C) It increases the affinity of hemoglobin for oxygen
D) It is normally found associated with the hemoglobin extracted from red blood cells
E) It is an allosteric negative modulator
It increases the affinity of hemoglobin for oxygen
Carbon monoxide (CO) is toxic to humans because it
binds to the Fe in hemoglobin and prevents the binding of O2
The coordinated nitrogen atoms in the heme prosthetic group have _____ character, which prevents conversion of the heme iron from the _____ state to the _____ state
electron-donating; Fe2+; Fe3+
The change in hemoglobin-binding affinity for oxygen due to changing pH and CO2 concentration in the blood is known as the
Bohr effect
Use the following equation to calculate the fractional saturation of myoglobin as it moves from the cell surface where pO2 is 10 torr to the mitochondria where pO2 is 1 torr.
YO2 = pO2/ (K + pO2)
Based on the fractional saturation change, what can you conclude about myoglobin?
A) Myoglobin’s affinity for oxygen (Ka) changes as ligand concentration changes
B) Myoglobin remains saturate with oxygen under this conditions
C) Myoglobin releases oxygen as the partial pressure decreases aiding in diffusion
D) Myoglobin’s binding saturation increases under this conditions
Myoglobin releases oxygen as the partial pressure decreases aiding in diffusion
How well would myoglobin facilitate the diffusion of oxygen inside the cell (pO2 at membrane 10torr, pO2 at the mitochondria 1 torr) if it’s p50 was 50torr?
A) Not well, it won’t bind much oxygen at the cell surface and therefore will slow down diffusion to the mitochondria
B) Very well, it will saturate with oxygen in the cell surface and facilitate diffusion to the mitochondria and deliver about 50% of the oxygen it caries in the
C) Not well, it will saturate with oxygen in the cell surface and not facilitate diffusion to the mitochondria
D) None of these choices
Not well, it won’t bind much oxygen at the cell surface and therefore will slow down diffusion to the mitochondria
Which alpha helixes contain the two functional amino acids for myoglobin?
F and E
Which histidine helps coordinate the iron in the protoporfirine prosthetic group
proximal
The major secondary structure found in myoglobin is
alpha helix
Which amino acid side chain increases binding affinity to O2 with respect to other molecules like CO, NO, and H2S ?
distal