Unit 4 Flashcards
Mitochondrial membrane permeability
Outer membrane: super permeable
Inner membrane: not very permeable
Infoldings in mitochondrial inner membrane
cristae
TOM
Translocase of outer membrane
passive transport
TIm
Translocase of inner membrane
ATP-dependent
Targeting sequence binds to TIM and opens the pore, only that protein will fit, and it’ll be fed through as a polypeptide strand.
Mitochondrial Fusion cellular GTPases
OPA1 and Mfn
Mitochondrial Fission cellular GTPases
Fis1 and Drp
F0 ATP synthase subunit
protein complex that spans the inner mitochondria membrane and contains a proton channel
F1 ATP synthase complex
bound to F0, enzyme that actually makes ATP from ADP and phosphate
Number of proton transfers needed to make 1 ATP
3
How is ATP transported out of the mitochondria?
ATP/ADP transporter
Role of mitochondria in cell death (apoptosis)
cell damage induces Bak/Bax-permeabilization of the outer mitochondrial membrane, which leads to cytochrome c release, which assembles an apoptosome
Role of mitochondria in necrosis
ischemic injury leads to MPTP-dependent permeabilization of the inner and outer mitochondrial membrane resulting in cytochrome release and elimination of the proton gradient, which prevents ATP synthesis and actually causes ATP synthase to reverse directions and use things up more quickly!
Mitochondria and quality control
1) mitochondrial proteases degrade misfolded proteins (mAAA, iAAA, Lon)
2) mitochondria can be fixed by fusing with healthy mitochonria
3) mitochondria can be eliminated by mitophagy
Why is mitochondrial QC important?
Mitochondrial damage and resulting increase in RUS is related to increased senescence and increased sensitivity to neuronal degeneration
Mitochondrial associated disease
mutation in OPA1 causes dominant optic atrophy
mutation in Mfn2 gene causes Charcot-Marie-Tooth neuropathy
mAAA protease mutation –> hereditary spastic paraplegia
Asenic mxn
inhibits oxidative phosporylation and ATP production
3 functions of mitochondria
1) ATP generation
2) Apoptosis
3) regulation of intracellular Ca2+
Outer membrane mitochondrial import
GIp= general import pore
Tom 70 and Tom 20 are import proteins
mtHSP70
recognizes the sequence for inner mitochondrial membrane import, binds it and TIM, hydrolyzes ATP, and pulls the protein through the membrane
ATP synthase structure
F1: 3 α and 3 β subunits, spins around and goes through 3 conformations
1) binds ADP
2) squishes phosphate and ADP together
3) ATP gets released
Cytochrome C and apoptosis
if cytochrome C is OXIDATED, it’ll form an apoptosome. It’s reversible if it’s small enough by reduction
Blood supply of epithelial cells
Epithelial cells are avascular. Nutrients and oxygen diffuse through basal lamina and connective tissue to reach epithelial cells
Epithelial funtions (7)
1) Barrier
2) Selection absorption and transport
3) Selective secretion
4) Movement of particles and movement through passageways
5) Biochemical modification of molecules
6) Communication to/from other tissues and organs
7) reception of sensory stimuli
endothelium
a tissue that faces blood and lymph
mesothelium
sheets of cells that line enclosed internal spaces of the body cavities
Organs that are composed mostly of epithelial cells in which epithelia are primary functional units
Liver, kidney, pancreas
Developmental origins of epihthelia
Developed from all 3 primary germ layers
There’s a lot of fluctuation in where the epithelia goes through early development.
-Many cells undergo epithelial to mesenchymal transition
Exceptions to generalized epithelia/CT/muscle/nerve relationships
- Some specialized neurons make contact with specific epithelial cells (ie taste buds)
- dendritic cells can infiltrate epithelia and migrate in and out of CT and can enter blood or lymph
lamina propria
the CT directly under the epithelium; typically contain lots of immune cells and small blood cells
submucosa
Layer of CT deep to the lamina propria. Typically contains larger muscles/vessels/nerves
Simple epithelia
all cells arranged in a single layer or sheet.
Stratified epithelia
more than one layer of cells in which cells of the outer layers do not directly contact the basal lamina.
pseudostratified
a special case where some cells do not reach the free surface
(giving a stratified appearance), but all directly rest on the basal lamina
Cell shapes relative to apical/basal axis
squamous=flat
cuboidal=cube-like
columnar=taller than wide
Naming stratified epithelia
Name them according to outer layer
Transitional epithelia (in bladder)
stratified,
but when stretched change their shape from cuboidal to squamous, and appear to decrease the
layering: this is indicative of a tightly adherent epithelium that is very resilient and stretchable.
Tight junctions
Key core proteins are claudins and occludins
In some epithelia the “tightness” of the barrier is regulated
Adherence junctions
Promote attachment, but also polarization, morphological organization and stem-cell behavior
cadherins link to actin filaments
and interact with other cells’ cadherins and intracellular proteins
Desmosomes
Promote mechanical strength
Contain a different type of cadherins that link to intermediate filaments and adapter proteins
location of tight junction complexes
Typically toward the apical side of cells
Are the basal and lateral membranes the same in protein composition, etc.
Not necessarily. Sometimes they’re different
Transcytosis
Transfer of vesicles from one side of the epithelium to the other
Microvilli
Protrusions that contain actin bundles connected to internal cytoskeleton
-Primary function= increase surface area
Stereocilia
a special type of microvilli found in the epididymis and sensory cells in ear.
Primary cilium
1 non-motile, microtubule based extension found on many cell types
-promote/organize signal transduction systems that control cell division, fate, and fxn
motile cilia
micotubule extensions that move like a boat oar to move mucus and other materials along.
Sensory cilia
not motile, have sensory fxn. ie. hair cells in ear
Location of villi and cilia
typically apical membrane. Sometimes there will be pockets for surface area in the basolateral membrane as well
Basal lamina
Formed by a special type of network-forming collagen (Type IV) interwoven with glycoproteins, laminins, and entactin
Basal laminae functions
- Attachment
- selective filtration to/from epithelia
- necessary for establishment of cell polarity
- “highways” for cells migrating through CT
- barrier to movement of microbes and cancer cells to other tissues
- control gene expression to effect proliferation or development
- Control development of epithelial cells by providin g a”tissue scaffolding” function (essential for repair following disease/injury)
Attachments of epithelial cells to basal laminae
hemidesmosomes (integrin attaches to IF’s) and focal adhesions (integrins attach to actin) on basal surface
**all of these are made primarily from integrins*
=Focal adhesions regulate polarity and function through signaling, and are probably important in healing/cell turnover
Three qualities of all epithelial stem cells
(i) are competent for cell division, (ii) self renew:
regeneration of a “mother” stem cell with each division, and (iii) produce differentiated cell types
specific to each epithelia.
Transit amplifying cells
- Daughter cells from stem cells that also proliferate, often at a faster rate
- They themselves produce differentiated cells
Cell lineage
A specific stem cell type, its intermediate progeny, and their differentiated progeny
Epithelial stem cell signaling source
secreted by cells within the same epithelium or in nearby CT
Core groups of signaling pathways that control tissue development
Wnt, Sonic Hedgehog, TGFβ, Notch, FGF, receptor tyrosine kinase family
Tarceva (erlotinib)
a lung and pancreatic cancer treatment
inactivates EGF receptor
2 mechanisms of glandular secretion
1) Exocytosis
2) Total cellular disintegration (these glands are called holocrine glands)
Exocrine glands
secrete on the apical side of epithelium, generally multicellular (but some are unicellular ie Goblet cells)
Exocrine secretory units
bowl/flask shaped: alveoli/acini->alveolar/acinar gland
tubes: tubular gland
Ducts
Tubular structure that emanates from the secretory unit, pathway for secretion to reach its destination
1 duct–> simple gland
>1 duct–> compound gland
3 types of exocrine glands
1) mucous–> viscous glycoprotein produced
2) serous–> watery/ salty fluid is produced
3) mixed–> both types of secretions released
Endocrine glands
-No ducts, secrete directly into blood stream
Organization of endocrine gland
generally a clump of cell embedded with surrounding CT containing extensive capillary networks (each clump surrounded by a basal lamina)
Direction of endocrine secretions
Typically basolateral (hormone must cross basal lamina)
Regulation of exocrine/endocrine glands
Regulated by autonomic input, blood hormones, or both
Endocrine secretions are tightly regulated, exocrine less so
carcinoma
cancer of epithelial origin
adenocarcinomas
cancers developed from glandular epithelium
Typical progression of tumors
Tumors most commonly develop within an epithelial sheet but then can metastasize
Treatment targets for carcinomas
1) development signaling systems (wnt, EGF, notch)
2) internal cell cycle control factors
3) factors that control DNA repair and apoptosis
Epithelia and wound healing
- If basal epithelial stem cells and lamina are intact–> intrinsic mxns work!
- If damaged extensively, skin grafts may be required.
Cilia Base anchor
Basal bodies/centrioles
- microtubule rich cylindrical structures formed from nine triplet microtubules
- Polarized structure: proximal end forms first, distal-end nucleates the cilium
Axoneme
- structural skeleton of the cilium
- 9 fold symmetry
- Each individual microtubule subunit contains A-B tubules
- Plus ends at ciliary tip
- provide tracks for movement within cilia
Linkage domain/Transition zone of cilia
“gatekeeper” of the cilia
- attaches basal body to axoneme and ciliary membrane
- Limits diffusion of both membrane and soluble proteins into cilia
- *many disease mutations occur in this domain**
Ciliary membrane
compositionally distinct from plasma membrane because of transition zone
Intraflagellar transport
Anterograde: Kinesin 2 and IFT-B
Retrograde: dynein 2 and IFT-A
Lipid rafts are transported back and forth
Which centrosome becomes the basal body?
The older/mother centrosome
When in the cell cycle are cilia formed? replicated?
Formed- Early G1/G0
Replicated-S (along with DNA)
Steps of ciliogenesis
1) Mother centriole recruits vesicle from the golgi (“ciliary vesicle”)
2) Doublet appendages form and elongate
3) The structure hits the plasma membrane and fuses, axoneme is formed.
Motile cilia structure
Typically have a 9+2 axonemal microtubule arrangement (but a few exceptions are 9+0)
Distinguishing factor between motile and sensory cilia
Motile cilia have axonemal dynein arms
Primary/Sensory are 9+0 without axonemal dynein arms
3 types of stimuli detected by receptors in cilia
1) Physical stimuli (mechanical, temp, osmolarity)
2) Light
3) Chemical stimuli
Reasons why cilia is an optimal signaling molecule
- Concentration of signal
- localized/polarized signal
- fluid mechanics (able to detect signals further from surface)
- can detect mechanical flow
Hedgehog signaling pathway
- Well established to act through cilia
- Target is the Glioma tumor transcriptional activator
Hedgehog downstream targets
Limb formation
bone formation
neurogenesis
Ciliary node
- an invagination of ciliary cells that forms during gastrulation
- cells beat in a rotary fashion producing a net leftward flow of signaling molecules
- Determines laterality of body
Bardet Biedl Syndrome
Autosomal recessive
-19+ genes id’d
-BBS proteins affect vesicle transport in the clilum
Symptoms: photoreceptor degeneration, anosmia, developmental delay, neural tube defects, obesity, hypogonadism, kidney defects, diabetes, situs inversus
Polycystic kidney disease
Autosomal dominant (polycystin 1 or 2 mutation) or recessive (fibrocystin mutation)
- genes encode Ca++ that sense mechanical flow of urine in kidney lumen
- renal, pancreatic, and hepatic cysts and intracranial aneurysms
CF genetics
Autosomal recessive
All mutations occur in CFTR gene (there are many)
ΔF508 is the most common mutation
CFTR function
Chloride ion channel
controls the movement of salt and water in/out of cells
Loss of this movement alters host defense in the lung
CF Class 1
No CFTR synthesis occurs
CF Class 2
Block in processing- CFTR synthesis starts but processing isn’t completed/ membrane insertion does not occur
CF class 3
Block in gating
Channel is made and put in the membrane, but Chloride can’t actually get through at all
CF class 4
Altered conductance
CFTR is made and inserted, but it doesn’t conduct chloride as well
CF class 5
Reduced synthesis