Unit 2 Flashcards
What are the ways to see the structure of the brain?
- MRI
-CAT/CT
What does MRI stand for?
magnetic resonance imaging
What are the advantages to an MRI?
- no x-rays or radioactive material
- provides detailed view of the brain in different dimensions
- shows the structure of the brain
What are the disadvantages to the MRI?
-expensive
-gross anatomy only
What does a CAT scan stand for?
- computerized axial tompography
What are the ways to measure the functional brain?
- PET Scan
-FMRI
What does PET stand for?
- positional emission tomography
What are the advantages to an FMRI?
- non-invasive
-detects changes in blood flow
(brain consumes the most O2 and glucose) - provides both anatomical and functional view of the brain
What are the disadvantages to the FMRI?
-blood flow is an indirect measure of neural activity
-large scale only
-heavy reliance on algorithms to standardize and produce data
What is a conectome?
a comprehensive map of neural connections
What are the levels of analysis for the connectome?
-microscale
-mesoscale
-macroscale
What does a microscale show?
- neurons immediate vicinity
What does the mesoscale show?
single neuron projections and circuit
What does the macroscale show?
connections between 1 brain region to another brain region
What scale is the serial electron microscopy on?
- microscale- shows neurons immediate vicinity
What is serial electron microscopy?
- only technique that can probe at the nanometer scale to elucidate a synaptic cleft
- done by sectioning tissue into thin slices and image
- aligns consecutive images to create 3-D volumes of individuals
- used to be done manually
What scale is trans-synaptic tracing on?
- mesoscale
What is trans-synaptic tracing?
- a strategy to determine local and long-distance connections between individual neurons
What are the two types of trans-synaptic tracing?
- anterograde
-retrograde
What is anterograde trans-synaptic tracing?
- starter cell to post synaptic neurons
What is retrograde trans-synaptic tracing?
- starter cell to pre-synaptic neurons
What is rabies viral trans-synaptic tracing?
- adapted from natural phenomenon
- retrograde tracer
- adapted to survive and spread in CNS
- transmission restricted to connected neurons (circuit info)
What scale is clarity on?
macroscale
What is clarity?
-allows visualization of deep structures without sectioning the brain
- Light-absorbing lipids are replaced with H20 soluble gel that turns the brain transparent
- neurons are labeled with flourescent molecules
(employs transgenic mice)
What’s the problem with connectome imaging?
all these techniques involve dead brains
What is the human connectome project?
- construct a map of the structural and functional; neural connections across individuals in vivo
- can see where genes are
- can help map how everything connects
- mapping is 1 cubic cm at a time
What does ipsilateral mean?
same side
What does contralateral mean?
different sides
How is the peripheral nervous system divided?
autonomic and somatic
What is the autonomic peripheral nervous system?
- controls self-regulated action of internal organs and glands
What is the somatic peripheral nervous system?
controls voluntary movements of skeletal muscles
What makes up the nervous system?
-meninges
-brainstem
-cerebral cortex
-ventricular system
-corpus callosum
-cerebellum
- spinal cord
What makes up the meninges?
-dura mater
-subdural space
-arachnoid membrane
-subarachnoid space
- pia matter
What is dura matter?
-thick tough inflexible covering
What is the subdural space?
-doesn’t exist under normal conditions but present in pressure disorders
What is the arachnoid membrane?
- resembles a spider web, holds layers close together
What is the subarachnoid space?
filled with CSF close to blood vessles
What is pia matter?
-adheres to surface of the brain
What is the ventricular system?
-contains CSF
- moves ions and nutrients
- no nerves or ganglion
What is in the cerebral cortex?
-sulcus
- fissure
-gyrus
What is the sulcus and an example of one?
-grooves
-increases area
-central sulcus
-valleys
What is a fissure and an example of one?
- a really deep sulcus
-increases area
-lateral fissure
-valleys
What is a gyrus and an example of one?
-ridges
-hills
-increases area
-precentral and postcentral gyrus
What are the types of cerebral cortex?
- molecular layer (surface)
-external granular layer
-external pyramidal layer
-internal granular layer
-internal pyramidal layer
-multiform layer
-all different sizes and densities depending on which part you’re looking at
What are Brodmann’s areas?
-distinguished 50 zones of cerebral cortex based on differences in cell
What do broadmann’s areas depends on?
-cytoarchitecture which depends on the type, size, density, and lamination (layer size) of the cell
- done using nissal stain
What is the nucleus?
- cluster of neuronal cell bodies with roughly similar functions and connections
What is the cortex?
- sheet-like arrangement (layers) of neuronal cell bodies
What is a tract?
- bundle of axons with same origin and destination
What is a commissure?
- a collection of axons that cross the midline
-largest is corpus callosum
What is the corpus callosum?
- beneath cortex
-connects left and right cerebral hemispheres - largest white matter structure in brain
- has colossal commissure
What is the colossal commissure?
- collection of axons crossing the midline
What is the cerebellum?
-part of CNS
- bilaterally symmetric (symmetrical off midline)
-coordinates precision, accuracy, timing of movements
What is the brainstem?
-part of the cns
-controls fundamentals of life
-contains midbrain, pons, medulla
What is the midbrain?
- involved in vision, hearing, eye movement, body movement
What is the pons?
- involved in motor control and sensory analysis
What is the medulla?
-maintains vital functions like heart rate and heart rate)
What are the parts of the spinal cord?
- cervical
-thoracic - lumbar
-sacral
(can turkeys leave scars)
What is a simple circuit?
- signal from the cerebrum initiates this
-underlies knee-jerk reaction
-organized by dorsal and ventral horns
What are dorsal horns in charge of?
sensory circuits
What are ventral horns a part of?
- motor circuits
What are sensory/afferent signals?
- neurons send signals from teh senses, skin, muscles, internal organs to CNS
What are motor/ efferent signals?
neurons transmit commands from the CNS to muscles, glands, organs
How is the PNS organized?
- autonomic and somatic
What is the autonomic PNS?
- controls self-regulated action of internal organs and glands
What is the somatic PNS?
- controls voluntary movements of skeletal muscle
What are the parts of the PNS?
- nerves and ganglion
What are nerves?
- bundles of axons in the PNS
What are cranial nerves?
-part of PNS
-nerves go to both sides
- damage can effect one side and not the other
What are ganglions?
cluster of neuronal cell bodies in PNS
What is plasticity?
-adaptability of an organism to change in its environment/ ability to alter the neural connections of the brain as a result of experience in the process of learning
When was the term plasticity used?
- first used in the biological sense by R owen in 1850s
- “Animals in a state of nature is required to show their degree of plasticity
-wasn’t used to reference to the nervous system until the early 1950s
What is neural plasticity?
the ability of the NS to change in structure and or function
What is synaptic plasticity?
- neural plasticity that occurs at the synapse
What are specific examples of synaptic plasticity?
- synaptic depression at the neuromuscular junction
- presynaptic facilitation in aplysia gill withdrawal reflex
- long term potentiation (LTP) in the hippocampus
Describe changes at synapses?
-long or short time
-can be presynaptic or postsynaptic
- structural (spines) or electrical (stronger synapse)
What does synaptic plasticity allow for?
- changes in behavior, not just at the synaptic level, but at the behavioral level too
-experience changes in brain function - can enhance memories and change NT receptors
How does feedback at synapses work?
- through NT autoreceptors located on the presynaptic terminal
- autoreceptors are not always on same cell, just same type of cell
-respond to NT released by presynaptic terminal - located on presynaptic membrane
What kind of synapse does synaptic feedback happen on?
- typically ligand-gated metabotropic receptors
- ligands can be ionotropic or metabotropic
What kind of feedback happens at synapses?
- negative feedback to decrease NT released by the presynaptic terminal
- positive feedback but that’s rare
What are examples of NT feedback at synapses?
- dopamine
-serotonin
-norepinephrine (noradrenaline)
-glutamate neurons
How does noradrenaline synaptic feedback work?
- presynaptic neuron releases NT (noradrenaline) into the synaptic cleft
- transmitter acts on receptors of the postsynaptic neuron, but also on autoreceptors typically inhibits further release of NT
- Activation of these autoreceptors typically inhibits further release of NT
How does synaptic plasticity occur through NT receptors on glial cells?
-glial cells are uniquely placed to mediate synaptic plasticity
How does synaptic plasticity occur through retrograde signals like endocannabinoids?
-originates from the postsynaptic terminal and goes back
- several types of messengers
-presynaptic neuron is usually GABAergic or glutamatergic
-may include anandamide and 2AG
- usually act on CB1 receptor to reduce (turn down) the opening of presynaptic v-gated Ca2+ channels
- mechanism for synaptic plasticity is NT receptors on glial cells
What type of receptors are endocannabinoids?
metabotropic
Are endocannabinoids autoreceptotrs?
no, this is a signal released by the post-synaptic neuron
Describe synaptic depression at neuromuscular junction?
- some patterns of stimulation of presynaptic motor neuron result in a decrease in the size of EPSPs recorded in the muscle fiber (details vary by species and muscle)
How does synaptic depression at the Neuromuscular junction occur?
- a pattern of NT release detected by Mach receptors in Schwann cells leading to feedback into the terminal to cause less NT release for Each AP
Why is a reduction in synaptic activity important?
- a reduction in synaptic activity is important to minimize synaptic fatigue and rundown of NT
What can synaptic depression at the neuromuscular junction be blocked by?
- preventing Ca increases within the perisynaptic glia
- treating with Adenosine A1 receptor antagonist
- treating with mACH antagonist
- NOT by treating with nACHR antagonist
Where does the glial withdrawal reflex occur?
- in aplysia
What is the glial withdrawal reflex?
- learns to keep gills closed in the presence of stimulus
- learned response
-more time creates a stronger response - underlined by a simple monosynaptic circuit
- results in a stronger reaction by the muscles but the actual change is occurring at the sensory to the MN synapse, not the neuromuscular junction
What is a neural circuit?
- functional entity of interconnected neurons to accomplish some sort of task
What does the glial withdrawal reflex depend on?
- a neuromodulator
- depends on input from sensation modulatory interneuron L29 which forms a synapse onto the terminal of the sensory neuron
- results in a stronger reaction by the muscles but the actual change is occurring at the sensory to the MN synapse, not the neuromuscular junction
What is presynaptic facilitation?
- cellular/ synaptic mechanism that underlies sensitization of the gill withdrawal reflex (behavioral change
What does presynaptic facilitation with the gill withdrawal reflex cause?
- causes a decrease in K+ conductance in the sensory neuron terminal (fewer K channels open) it then stimulates synaptic growth
- longer refractory period
- less K+ efflux
- slower falling fase, less/ no undershoot, broader/ taller AP
- more depolarization of the terminal membrane
- could even build another synapse
What is the hippocampus necessary for?
- learning, particularly spatial and short-term memory
What is LTP?
- lasting potentiation of the EPSP
How can LTP be induced?
-strong depolarization of input one
- exact parameters vary depending on brain region
- there is input specificity
-NMDA can be essential
What inputs are unique to the hippocampus?
- CA3 inputs to CA1 neurons
What does a strong depolarization for LTP require?
- Postsynaptic CA1 neuron at the same time as pre-synaptic activity
- synapses not active, when the postsynaptic neuron is strongly depolarized, will not experience LTP (example of input specificity) (hebbian plasticity)
How do NMDA receptors be responsible for LTP
- ligand-gated by glutamate and voltage-gated y depolarization
- only allow CA2+ in when it is bound by glutamate, the membrane is strongly depolarized, and glycine is present
what are the additional mechanisms underlying LTP?
- increased effectiveness of AMPA receptors
- increased number of AMPA receptors in the postsynaptic membrane
- in some cases an increase in NT release and an increase in synaptic number
- must be communication between postsynaptic terminal to presynaptic terminal
How does retrograde signaling induce plasticity via endocannabinoids?
-retrograde messenger is endocannabinoids
-cannabinoid receptors are metabotropic
- presynaptic and postsynaptic neurons are usually gababergic or glutamatergic
- can vary by sex
- usually act on CB1 receptor to reduce the opening of presynaptic v-gated Ca channels
Are endocannabinoids an example of autoreceptors?
no, this is a signal released by the postsynaptic neuron
What form of receptors are cannabinoids?
metabotropic
How do endocannabinoids vary by sex?
- AEA is only in female hippocampus
What are examples of endocannabinoids?
- anandamide, AEA, 2-AG
How long can LTP last?
- over a year
- very long time
How can LTP be mediated by structural changes?
- more spines can grow
- sex and cocaine affect nucleus accumbens core medium spine density
- spine density is sexually dimorphic (females have enhanced response if they try but are less likely to try)
What is the effect of cocaine on spine density?
- increased density in all genders
What are the methods of synaptic plasticity?
- LTP and depression
- morphological changes in dendrite. axon structure, including spines
- genetic (changes in gene expression)
- molecular/ neurochemical (chemical phosphorylation)
- synaptic connections (new synapses, get rid of synapses, synaptic rearrangement)
- intrinsic properties (changes in excitability)
- neurogensis and neural recruitment
- structural plasticity
What is plasticity history?
- adult neural plasticity wasn’t widely accepted until 1970s
-1793: malacrane est. training a dog increased amt of cerebellar folding
-1890: william james proposed brain and its function aren’t fixed - 1894: ramon y cajal said adult brain is fixed but mental exercise leads to more dendrites
Why did it take so long for neural plasticity to be accepted?
- neuron doctrine isnt formed until 1890s
- synapse wasnt coined until 1897 (can’t name what you don’t know)
- 19th centruy evidence showed brain had less individual variation in size than other organs and is less effected by body weight changes
- thought adult brian was anatomially fixed bc they couldn’t see microscopic vidence
What was the plasticity paradigm shitf?
-early 1960s altman and DAS reported neurogenesis in rat hippocampus (canaries too later)
- LTP observed by Lomo in 1966
- 1963: Hubel and wisel discover ocular deprivation changes number of cortical neurons responding to light
-1961: rosenzweign said total ACHE activity higher in trained rats given harder problems and alll groups easier than rats given no training
What is structural plasticity?
- brain’s ability to change its neuronal connections an anatomy
- usually on microlevel (spines, dendrite shape, synapse, sometimes new neurons)
How do some insects have macrochanges like metamorphisis?
- incorporates new neurons into CNS at highly divergent rates depending on species, brain region and developmental stage
- often studies effect of various internal or external stimuli on brains anatomical recognition
What is the cortex?
- outer layered layer of the brain
What does the nissil stain do?
- shows cell bodies and ribosomes of neurons
What does the golgi stain do?
shows dendrites and axons of a random subset of neurons
What is neurogenesis?
- process by which new neurons are formed in the brain via neural stem cells
- crucial when an embryo is developing, but continues in certain brain regions throughout life
How does neurogenesis happen in adults?
- proliferation: new cells generated from stem cells
- survival of a portion of these new cells and their migration toward target areas
- terminal differentiaion into a neuronal or glial phenotype
- recruitment into the existing neuronal circuit
- forms new synapses
What is neural recriuitment?
- incorporation of new neurons into existing neural circuits and brain regions
- happens in fetal and infant brains
What are the rat experiments?
- altman and das in 1965
- thymidine H3 labeled granule cells in rat hippocampus
- used theymadine to show the amount of cell proliferation and neurogenesis
What is thymidine commonly used in?
- cell proliferation assays
- incorporatied into dividing cells proportionally to the amount of cell proliferation
Who completed the songbird experiments?
- fernado nottebohn
What are the songbird’s experiements?
-paper is a brain for all seasons
- seasonal changes in song stereotype in canaries
- og song and then song falls apart and then a new modified song is created
- the final conclusion is that the rate of neurogenesis seems to dramatically differ between environment, brain regions, species, human being substantially lower than some other species
What is the evidence of the songbird experiment?
- same technique as rats, but adults and longer time period after thymidine injection
- direct link to behavior
- clear evidence to hormone modulation
- clear and careful differentiation of neurons, glia, and ventricular cell
- electron microscopy and electrophysiology
How can adult brains undergo neurogenesis?
- stem cells means its possible to trigger neurogenesis and neural recruitment
What are the cab driver experiments?
- tested cab drivers since they have to navigate without maps
- showed an increase in spatial learning
- higher gray matter volume
- not enough proof because correlation doesn’t equal causation
What makes neurons more lilkely to survive?
- in the adult hippocampus they are more likely to survive if they are used
What are the misc. examples of neural plasticity?
- nursing rats have smaller somatostatin from ventral side
- neurons process smaller portions of skin meaning that precision and resolution are increased
- cats with cut whiskers adapt
What is hemifeild neglect:?
- unilateral attention deficit of right side of the brain
- contralateral damage
What kind of damage does hemifeild neglect create?
- contralateral
- damage to right side displays on left
What causes hemifield neglect?
- damage to righ parietal cortex
- after a stroke you can regain some function
What is the hemingeild italy experiement?
- patients were asked to imagine they were standing in different places and what they could see
- shows this is a problem with perception, not sensation
- since they were asked to recall it showed they had an internal field that couldn’t imagine the stuff on the left
What is sensation?
- processing of info through senses
What is perception?
- conscious experience of sensory info
What are the general principles of sensory systems?
- have specialized receptor cells
- has sensory transduction and sensory coding
- has receptive field and response properties
- The thalamus is a relay/ processing station
- thalamus is main part of every sense except olfaction
- primary sensory cortex
- has orderly representation (like brain maps)
- association cortex and higher-order processing
- has parallel processing
- descending regulation
-adaptation
How is the blind spot of the eye created?
– optic nerve is where axons and blood vessels go to and from the retina and the rest of the CNS creating it