Unit 1 Bioenergetics Flashcards

1
Q

entropy

A

(S)

randomness associated with a given system

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2
Q

enthalpy

A

(H)

measure of heat content (thermodynamic potential) of a system

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3
Q

free energy

A

the amount of thermodynamic energy in a system that can be converted into work at a given temp and pressure

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4
Q

high energy compounds

A

compounds with bonds that release greater than 7 kcal/mol of energy when broken
(∆G= -7; chemical energy of greater than 7 kcal/mol)

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5
Q

Oxidation-reduction reaction:

A

a chemical reaction involving the transfer of electrons away from one or more compounds (the oxidized compounds) to one or more other compounds (the reduced compounds)

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6
Q

1st law of thermodynamics

A

energy is neither created nor destroyed. Energy can be converted into different forms but is always conserved

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7
Q

2nd law of thermodynamics

A

entropy of the universe is constantly increasing

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8
Q

kinetic energy

A
  • radiant energy
  • thermal
  • mechanical
  • electric
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9
Q

radiant energy

A
  • kinetic energy

- carried in photons from sun, the ultimate source of all forms of energy in living systems

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10
Q

thermal energy

A
  • kinetic energy

- protein molecules function optimally at a particular temperature or need certain thermal energy to function

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11
Q

mechanical energy

A
  • kinetic energy

- movement of cells and cell components

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12
Q

electrical energy movement

A
  • kinetic energy

- movement of charged particles down gradients of electric potential

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13
Q

potential energy

A
  1. stored in chemical bonds
  2. stored in concentration gradients
  3. stored in electric fields from charge separation
  4. stored in redox pairs
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14
Q

-∆G

A
  • reaction is thermodynamically favorable

- will occur spontaneously at any temp

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15
Q

∆G is

A

Gibbs free energy constant

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16
Q

+∆G

A
  • rxn not favorable

- will not occur spontaneously at any temp

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17
Q

Gibbs free energy equations

A

∆G = ∆G0 + (RT * ln [PRODUCTS]/[REACTANTS])

b) ∆G0 = -RT * ln (Keq)
c) ∆G = ∆H – (T * ∆S )

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18
Q

∆H is

A

change of enthalpy (of bond energy) of a reaction

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19
Q

exothermic rxn

A

-heat released

∆H is negative (favorable)

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20
Q

endothermic rxn

A

-heat is absorbed

∆H is positive (unfavorable)

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21
Q

∆G < 0

A

spontaneous

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22
Q

∆G > 0

A

nonspontaneous

23
Q

∆G = 0

A

equilibrium

24
Q

∆S is

A

Sprod -Sreact

change of entropy or randomness of a rxn

25
Q

-∆S

A

unfavorable

26
Q

+∆S

A

favorable

27
Q

∆G ° ‘ determines the

A

position of equilibrium in a chemical rxn

28
Q

a thermodynamically favorable run may not occur because

A

the rxn rate is limited by high activation energy

29
Q

how to calculate ∆E

A

subtract Eo of the electron donor from the Eo of the electron acceptor

30
Q

Eo of a molecule is high when_______

and high negative when ____

A

the molecule is more electronegative

the molecule is more electropositive

31
Q

when ∆E is positive,

A

∆G is negative and the rxn is more spontaneous

32
Q

Coupling means

A

the sum of the run determines the spontaneity, thus allowing a rxn of +∆G to continue if paired with a -∆G rxn of greater absolute value
can couple a very favorable rxn with an unfavorable one to make the overall rxn favorable

33
Q

High energy bonds

A
  1. thioester bonds
    C–S: acetyl CoA
  2. Hi energy phosphate bonds
34
Q

hi energy phosphate bonds

A
  1. Phosphoanhydride (P–O–P bonds, ATP)
  2. (P–N) bonds: phosphocreatine
  3. (C–O–P) bonds: phosphoenolpyruvate
35
Q

the source of energy in all cells

A

thioester bond in acetyl CoA

36
Q

nucleophilic attack can occur at ______ on ATP

A

3 locations of ATP

but beta and delta release much more energy than the alpha

37
Q

the energy yield from ATP, ∆G, depends on

A

concentrations of reactants and products in the cell

38
Q

oxidation

A

loss of electrons

39
Q

reductions

A

gain of electrons

40
Q

reduction potential E is a measurement of

A

readiness with which an atom or molecule accepts an electron relative to H+

41
Q

the more positive the E, the

A

more a molecule like electrons

42
Q

the more negative the E value, the

A

more it likes to donate electrons

43
Q

reduction potential is measure in

A

volts

44
Q

the energy yield from oxidation of fuels depends on ______

A

the oxidation states of carbon in different compounds

45
Q

in cells, _____ is the major source of electrons, _______ is the final electron acceptor

A

glucose

O2

46
Q

the “circuit” for electron flow is a

A

series of proteins, including cytcochromes with co-factors such and Fe2+/Fe3+ containing heme groups that are alternatively oxidized/reduced and release energy in small steps

47
Q

emf is used to

A

make high energy compounds ATP, NADPH, NADPH that are used to do biological work

48
Q

potential energy is stored as

A

NADH

49
Q

ATP is made by

A

harnessing the energy in gradients of H+ concentration and electrical potential across the inner membrane of mitochondria

50
Q

high energy phosphate bonds

A
  1. ATP
  2. P-N Bonds (phosphocreatine)
  3. C-O-P bonds: (phosphoenolpyruvate)
51
Q

in cells, major source of electrons

A

glucose

52
Q

in cells, final electron acceptor

A

O2

53
Q

compounds such as _____ give off lots of energy when they combust, they have large ____

A

carbohydrates
lipids
ΔG

54
Q

one of the major ways to harness energy for production of ATP

A

oxidation of glucose

ΔG’o= -686 kcal/mol