Tumour supressor genes Flashcards

1
Q

What were the initial thoughts against and in favour of tumour suppressor genes existing?

A

YES- loss of growth suppressor genes more likely than a gain of function mutation in ras
NO- losing both copies of the suppressor gene seems unlikely

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2
Q

Features of familial retinoblastoma?

A

usually bilateral- affects both eyes
recessive disease
significant increase in non-retinal tumours
diagnosed very early on in life

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3
Q

How did knudson collect data to create the 1/2 hit hypothesis?

A

Collected data from patients with both unilateral/sporadic and bilateral/familial RB over many years
plotted % of cases not yet diagnosed against age in months
made a log scale to determine how many ‘reactant’ were involved in each form of the disease

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4
Q

What does a straight and curved line mean in a log plot?

A

Straight=one thing involved

Curved= two things involved

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5
Q

What was determined about unilateral RB?

A

It takes two independent events to form

the genome needs 2 hits

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6
Q

What was determined about familial RB?

A

It only takes one event to form

the genome only needs one hit

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7
Q

If it takes two hits, why is sporadic RB at such a high frequency?

A

Homologous recombination and subsequent segregation of the chromatids causing loss of heterozygosity

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8
Q

What is homologous recombination?

A

Occurs during G2 and M
sister chromatid arms can wrap around each other and swap over
transferring (for example) a mutated gene from one chromosome to another
depending on the segregation of the chromatids into the daughter cells- the cells may lack any functional copy of the gene

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9
Q

What other events cause loss of heterozygosity?

A

Gene conversion

Chromosomal disjunction

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10
Q

What is gene conversion?

A

When DNA replication temporarily switches from one template to another- possibly synthesizing a mutated allele

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11
Q

What is chromosomal disjunction?

A

When both chromatids of a chromosome move into a daughter cell, meaning the other daughter cells lacks a chromosome

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12
Q

What is D esterase?

A

An enzyme that hydrolyses esters

there are 2 alleles, both code for proteins of different lengths which can thus be separated through gel electrophoresis

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13
Q

Where is the gene D esterase positioned?

A

Chromosome 13 on the q arm in region 14

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14
Q

What is zymography?

A

Technique- based on gel electrophoresis- method for measuring enzymatic activity
no denaturation of proteins
the gel is impregnated with a substrate of the proteins which are separated
if there is interaction- this will be detected
two bands on a zymogram signified heterozygosity

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15
Q

What does the zymogram of a patient with RB always show?

A

Homozygosity of the d esterase gene

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16
Q

How do you determine whether a person lacks the RB gene?

A

Northern blotting

17
Q

What is RFLP analysis?

A

Restriction fragment length polymorphisms

way of determining whether there has been a change in a chromosome- and determines if there has been LoH

18
Q

What is used instead of RFLP now? when is this technique useful?

A

SNP analysis

only useful if a significant proportion of the cancer patients are the marker loci in their normal tissues