Topic 5 Flashcards

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1
Q

Ecosystem

A

All the organisms living in a particular area, as well as all the abiotic factors

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2
Q

Habitat

A

The place where an organism lives

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3
Q

Population

A

All the organisms of one species in a habitat

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4
Q

Population size

A

Number of individuals of one species in a particular area

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5
Q

Community

A

All the organisms of different species that live in the same habitat and interact

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6
Q

Abiotic factors

A

non-living features of an ecosystem

e.g. light, water, space, temp, chemical comp

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7
Q

Biotic factors

A

living features of an ecosystem

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8
Q

Abundance

A

Number of individuals of one species within a particular area

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9
Q

Distribution

A

Where a species is within a particular area

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10
Q

Ideal Abiotic Factors (mammals)

A

Mammals surrounding temperatures suitable for metabolic reactions (less energy required)
- faster growth and reproduction

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11
Q

Biotic Factors that cause variation in Population size / Abundance

A
  1. Interspecefic Competition
  2. Intraspecefic Competition
  3. Predation
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12
Q

Interspecefic Competition

A

Competition between species

  • same resources
  • > availability reduces
  • > populations limited
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13
Q

Intraspecefic Competition

A

Within a species

  1. Population increase = pletiful resources
    - competing organisms increase
  2. Limits food + resources
    - > begin decline
  3. Smaller population
    - > better reproduction
    - grows again
  4. = Carrying Capacity
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14
Q

Carrying Capacity

A

Maximum stable population

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15
Q

Predation

A

The link between predator and prey population size

  1. Prey population increases
    - > more predator food
    - predator population grows
  2. Prey eaten
    - > prey population falls
  3. Less predator food
    - > predator population decreases

Note: lack of prey food source causes downwards spiral of prey/predator population

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16
Q

Affect of Abiotic & Biotic factors on Distribution

A

Abiotic:

  • Plants that only grow on south facing slopes in northern hemisphere
  • > solar input = greatest
  • plants that don’t grow near shoreline
  • > too saline
  • large trees do not grow in polar regions
  • temperature = too low

Biotic: Adapted to ‘out compete’ = better chance of survival

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17
Q

Sampling

A

Investigate populations (abundance + distribution)

  1. choose area to sample (Random or non-random e.g. systemetic)
  2. count no. of individuals of each species
  3. repeat process -> indicator of whole habitat
  4. estimate
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18
Q

Frame Quadrats

A

Square frame divided into grid of 100 smaller squares
1m x 1m
- string attached across the frame
- no. of species recorded at each quadrat
- % cover of plant species -> if a square is more than half covered = 1 (quick method)
- large quadrats marked out by tape measure

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19
Q

Point Quadrats

A

Horizontal bar on two legs with holes at set intervals

  • placed on ground at random points
  • pins dropped through holes
  • every pin touched is recorder (even if one plant touches multiple)
  • no. of each species recorded
  • % cover: no. of pins touching a given species
  • > % of total pins dropped
  • useful in low, dense vegetation
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20
Q

Transect(s)

A

Distribution measured along line(s)

  1. Line transect:
    - tape measure placed along transect; species touching -> recorded
  2. Belt transect:
    - data collected along transect using fra, quadrats placed consecutively
  3. Interrupted transects
    - Measurement at set intervals (belt or line T)
    - point quadrats placed at right angles at set intervals
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21
Q

Kite Diagram

A

Shows abundance + distribution

  • abundance = thickness of kite shapes; symmetrical, %
  • x-axis = distance (along transect)
  • abiotic factors plotted (e.g. land surface)
  • each ‘kite’ labelled with organism
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22
Q

Methods of measuring Abiotic factors within a habitat

A
  1. Climate:
    - temperature = thermometer
    - rainfall = raingauge (funnel + cylinder)
    - humidity = electronic hygrometer (water vapour)
  2. Oxygen availability (aquatic habitats):
    - O2 dissolved in H2) = Oxygen sensor
  3. Solar input = light sensor
  4. Edaphic factors (soil condition);
    - pH = indicator liquid (soil, water + indicator)
    - moisture content = % difference before + after drying
  5. Topography:
    - relief = height of the land (contours)
    - aspect = slope direction (compass)
    - slope angle = clinometer (string + weight attached to protactor centre)
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23
Q

Climate

A

Weather conditions of a region over a long time period

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24
Q

Edaphic

A

Conditions of soil

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25
Q

Measuring moisture content

A

Mass measured before + after being dried in oven at 80 - 100 C

  • until constant mass
  • percentage difference = moisture content
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26
Q

Succession

A

Ecosystem Change

  1. Primary = newly formed/ exposed land
    - no soil + organic matter to start with
    - e.g. volcanic eruption, lowered sea level
  2. Secondary = cleared of plants/ pre-existent life
    - soil remains
    - e.g. forest fire / deforestation
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27
Q

Primary Succession

A
Species (pioneers) colonise new land surface
Abiotic factors = hostile
- no water retention (no soil)
Pioneers (e.g. marram grass) die
- microorganisms decompose (into) humus
-> basic soil = less hostile
-> water retained
New organism die 
-> richer, deeper soil -> more minerals
Species may change environment so it is less suitable for earlier species:
- e.g. maram grass needs constant sand reburial to be healthy
- sand sedge stabalises sand
-> Rhizomes grow
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28
Q

Primary Succession (process)

A
  1. Pioneers colonise rocks
    - e.g. lichens grow on -> break down rocks
  2. Lichens die -> decompose -> thin soil
    - mosses grow
  3. Larger plants recquiring more water move in as soil thickens -> die -> soil deepens
  4. Shrubs + ferns & small trees grow
    - out compete & become dominant species
    - increased diversity
  5. Soil = deep + rich -> support trees
    - > dominant species
    - > climax community
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29
Q

Rhizomes

A

Underground stems

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30
Q

Key aspects of primary succession

A

Each stage = better adapted

  • out-competes
  • dominant
  • > ecosystem becomes more complex
  • new species move in alongside -> increased biodiversity
  • Final stage = Climax Community
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31
Q

Climax Community

A

The largest and most complex community that can be supported in a steady state

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32
Q

Secondary Succession

A

Already a soil layer present

Succession starts at a later stage -> pioneers = larger plants

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33
Q

Preventing Succesion

A

Artificially stopped = PLAGIOCLIMAX

  • regularly mown field
  • > growing plants cut by lawn mower
  • > inhibits diversity
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34
Q

Particular Climax

A

Climatic Climax

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35
Q

Temperate Climax Community

A
  • plenty of water
  • mild temperatures
  • little change between seasons
  • climax community = large trees
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36
Q

Polar Climax Community

A
  • little available water
  • low temp
  • massive seasonal changes
  • climax community = herbs or shrubs
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37
Q

Phosphorylation

A

Adding phosphate to a molecule

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38
Q

Photophosphorylation

A

Adding phosphate to a molecule using light

39
Q

Photolysis

A

Splitting (lysis) of a molecule using light energy

40
Q

Hydrolysis

A

Splitting of a molecule using water

41
Q

Redox Reaction

A

Oxidation + Reduction

  • Reduction = gained electrons (alternatively, gained H/ lost O)
  • Oxidation = lost electrons (lost H/gained O)
42
Q

Animals need energy for …

A

Muscle contractions
Homeostasis
Protein Synthesis
DNA replication

43
Q

Plants need energy for …

A

Photosynthesis
Active Transport
Cell division

44
Q

Photosynthesis

A

Energy from light used to break apart strong bonds in H2O molecules
-> Hydrogen then stored in glucose by combining with CO2, releasing O2

45
Q

Photosynthesis equation

A

6CO2 + 6H2O + Energy -> C6H12O6 + 6O2

46
Q

ATP

A

Adenine Triophosphate = immediate energy source in cell (energy from glucose breakdown (respiration) used to make it)

  1. synthesised by ADP phosphorylation
  2. energy from glucose breakdown stored in phosphate bond
  3. catalysed by ATP synthase (enzyme)
47
Q

Inorganic Phospahte

A

Single Phosphate

48
Q

ATP use in cell

A

ATP carries energy around cell -> target (diffuses)
1. broken down via hydrolysis -> ADP + Pi
2. energy released from phosphate bond
3. ATPase catalyses reaction
ADP + Pi recycled

49
Q

Chloroplasts

A
  1. Flattened organelles found in plant cells
  2. double membrane = chloroplast envelope
    - keeps photosynthesis reactants close to reaction sites
  3. thylakoids = fluid filled sacs
    - large SA -> max light energy absorption
    - stacked = Granum (linked by Lamella = thykakoid membrane)
    - Lots of ATP synthase (for ATP in LDR)
  4. Photosynthetic Pigments = coloured substances that absorbed light
    - in thylakoid membrane
    - e.g. chlorophyll a, b & carotene
    - attached to protein
  5. Two photosystems:
    - PSI = 700 nm
    - PSII = 680nm
  6. Stroma = gel like substance
    - contains enzymes, sugars and organic acids
    - contains oil droplets
    - LIR site
50
Q

Three photosynthetic pigments

A

Chlorophyll a
Chlorophyll b
Carotene

51
Q

Photosystem

A

Protein + Photosynthetic Pigment

Two phtosystems in chloroplasts:

  • PSI = 700 nm
  • PSII = 680nm
52
Q

Stages of Photosynthesis

A
  1. Light Dependent Reactions (LDR):
    - occurs in thylakoid membranes
    - light energy -> photosynthetic pigments (photosystems) -> chemical energy
    - > ADP + Pi -> ATP (transfers energy)
    - > reduces NADP (reduced NADP) by transfering hydrogen when H2O is oxidised
  2. Light Independent Reactions (LIR):
    - occurs in stroma
    - ATP + NADP reduced; supply energy + hydrogen
    - CO2 -> glucose
53
Q

Light Independent Reaction

A

Light energy used for three things:

  1. ADP + Pi -> ATP (photophosphorylation)
    - Non-cylic
    - Cyclic
  2. NADP -> reduced NADP
  3. H2O -> protons, electrons, oxygen (photolysis)
54
Q

Non-Cyclic Photophosphorylation

A

Photosystems linked to electron Carriers = Electron Transport Chain (ETC)

  1. light energy absorbed by PSII
    - excites electrons in chlorophyll
    - e-‘s excited to higher energy level
    - high energy e-‘s move along ETC to PSI
  2. Excited e-‘s leaving PSII must be replaced
    - H2O -> H+, e- & O2 (photolysis)
    - > H2O -> 2H+ + 1/2 O2
  3. excites e-‘s lose energy as they move along ETC
    - energy used to transport protons into thylakoids -> higher H+ concentration that stroma
    - > results in proton gradient across membrane
    - protons go down gradient into stroma (using stalked enzyme ATP synthase that bypasses membrane)
    - uses energy from ATP formation = chemiosmosis
  4. Light energy absorbed by PSI
    - e-‘s excited to higher energy level
    - e-‘s transferred to NADP + H+ (from stroma)
    - > reduced NADP
55
Q

Cyclic Photophosphorylation

A
  • Only uses PSI
  • e-‘s from chlorophyll molecule passed back to PSI via electron carriers
  • electrons recycled
  • > repeatedly flow through PSI
  • > no reduced NADP or O2
  • > small amounts of ATP generated
56
Q

Electron Carriers

A

Proteins that transfer electrons

57
Q

Electron Transport Chain

A

Protein chain through which excited electrons flow

58
Q

Light Dependent Reaction

A

= CALVIN CYCLE or Carbon Dioxide Fixation (CO2 fixed to organic molecule)
- Stroma = site
- Molecule = glyceraldehyde 3-phosphate (GALP) (3C)
= Ribulose biphosphaye (RuBp) (5C)
- ATP + reduced NADP recquired to keep cycle going
- starting compound (RuBp) regenerated
- enzyme = RUBISCO used for CO2 fixation

59
Q

Calvin Cycle

A
  1. CO2 enters leaf via stromata -> diffuses into stroma
    - combines with RuBp ( catalysed by RUBISCO)
    - > unstable 6 carbon compound
    - > breaks into 2 x glycerate 3-phosphate (GP)
  2. 2x ATP hydrolysed for energy
    - 2 x reduced NADP -> NADP for H+ ions
    - > GP (x2) -> GALP ( x 12)
    - some GALP converted into useful organic compounds (2)
    - rest continues to regenerate RuBp (10)
  3. RuBp regenerate requires ATP hydrolysis for energy
60
Q

Calvin Cycle diagram (for 1 CO2 molecule)

A

ngng

61
Q

Other organic substances produced by Calvin Cycle

A
  • carbs = 2 x GALP (saccharides)
  • lipids = glycerol (synthesized from GALP), fatty acids (synthesized from GP)
  • amino acids (usually made from GP)
  • nucleic acids = ribose (made from GALP)
62
Q

Measuring energy transfer between Trophic levels

A
  • Difference = dry mass (biomass) measurements
  • dried at 80-100 C until reaches ‘constant mass’ (measured at intervals) -> water removed
  • sample results multiplied by total population size = energy at trophic level

note: errors can be found in locating energy source
- accurately estimating = include all individuals at trophic level (e.g.different species)

63
Q

Energy Transfer

A
  1. Roughly 90% of total available energy lost between trophic levels
  2. 60% never taken in:
    - wrong wavelength, reflected, passes through
    - hits wrong region e.g. bark
    - parts uneaten; go to decomposers
    - indigestible
  3. 40% absorbed = gross productivity
    - 30% ( 75% of GP) lost to environment
    - > respiration = body heat (respiratory loss)
  4. 10% goes to Biomass = Net productivity
64
Q

Net Productivity

A

Amount of energy available to next trophic level

note:
- producers = net/gross primary productivity

65
Q

How does energy mainly enter the ecosystem

A

Via producers (plants) storing light energy as biomass by means of photosynthesis

  • transferred through consumers (primary, secondary etc)
  • each stage = trophic level
66
Q

Climate Change

A

Long term changes in global weather patterns

- natural variations as well as commonly being in reference to human changes (e.g. global warming, greenhouse effect)

67
Q

Global Warming

A

Rapid increase in temperature seen over the last century, resulting in changes to seasonal cycles and rainfall patterns

68
Q

Evidence of Climate Change (3)

A
  1. Temperature records
  2. Dendrochronology
  3. Pollen in peat bogs
69
Q

Temperature Records

A

Measured since 1850’s (thermometers)

  • reliable, but short term record
  • > general trend of increasing temperature (even noting fluctuations)
70
Q

Dendrochronology

A

Finding out the age of the tree, using its rings

  • one ring within trunk per year
  • thickness of ring dependent on climate when formed
  • > warmer = thicker (better conditions for growth e.g. water + nutrients)

Cores taken through trunk: each ring dated + thickness recorded to indicate climate
- closest to bark = most recent

71
Q

Pollen in Peat Bogs

A

Pollen preserved in peat bogs (acidic wetland)

  • bogs accumulate in layers (age increases with depth)
  • cores taken
  • > extract pollen grains -> identify plant species
  • only mature plants produce pollen (indicates plant species was successful during that period)
  • similar plants to now are compared
  • > indicates climate in that period (varies as climate changes)
  • more warm attributed species -> indicates temp increase

note: indicates temp change over thousands of years

72
Q

Anthropogenic causes of climate change

A

Enhance greenhouse effect (absorbs more outgoing enegy, so less is lost to space)

CO2:

  • atmospheric concentration increased by 100ppm since mid-19th century
  • stable for previous 10,000 years
  • > natural sinks destroyed
  • > fossil fuels burnt

CH4:

  • atmospheric concentration doubled since mid-19th century
  • levels stable for previous 850 years
  • > fossil fuels
  • > decaying waste increase
  • > more cows
  • > permafrost release
73
Q

Data Extrapolation for Climate Change

A

Minimum, stable and maximum emissions are put into the global climate model

Issues:

  • don’t know how emissions will change
  • nor how much each will rise by
  • natural causes (for change) are unknown
  • don’t know how successful attempts at change are
  • complex feedback systems with little understanding of climate impact
74
Q

Increased Temperatures affect on rate of enzyme activity

A

Initial rate increase

  • more heat -> more kinetic energy
  • > faster moving molecules -> collisions increase + energy of collisions increase

Too high -> reaction stops

  • enzyme’s molecules vibrate more
  • x > 37 C (animals)
  • x > 25 C (plants) -> vibrations break bonds for enzyme shapes
  • > active site changes shape
  • E-S complex cannot form
  • enzyme = denatured
75
Q

Increased Temperatures affect on life cycles, development & distribution

A

Some organisms:
- speed up metabolic reactions
- growth rate increases
- develop + progress through life faster
E.g Cyanobacteria = blue/green algae that photosynthesise
- some species produce toxin
- warmer water -> increased growth rate = more harmful algal blooms

Temperature becomes too high for others:
- metabolic reactions slows
- decreased growth rate
- slower life cycle
E.g. Wheat grown above 25 C develops fewer grains and yield fall
E.g. Eggs of cold water fish (trout, salmon) develops best at low temps
- will not hatch if too high
- brown trout > 13 C; does not hatch
76
Q

Changing Rainfall Patterns

A

Affects distribution

Ocotillo = desert plant

  • dormant during dry periods
  • reduced rainfall = less growth of new leaves
  • > dormant for longer
77
Q

Affect of altered Seasonal Cycles

A

Changing timing of the seasons:
-> red squirrels in Canada birthing 3 weeks earlier due to earlier food availability

Distribution:

  • swallows live in South Africa & fly to different parts of Europe to breed at the start of spring
  • earlier British spring = earlier flowers + insects
  • > swallows arrive when little food is available
  • reduced swallows born in Britain
  • > those that migrate there eventually die out
78
Q

Carbon Cycle

A

(insert diagram)

Photosynthesis = plants
Respiration =  plants, animals, decomposes
Decomposition = plants + animals
Combustion = fossil fuels
79
Q

Increased Temperatures affect on Distribution

A

Global warming -> affects distribution (move, die out, or expand)

  • alpines -> zone of growth moves higher up to cooler areas
  • subtropical plankton -> found further north (sea surface temp in northern Atlantic increased)
  • European butterflies -> shifted northward range
80
Q

Metabolism

A

All the chemical reactions that take place in the cells to keep the organism alive, which is controlled via enzymes

81
Q

Decreasing Atmospheric CO2 concentration

A

Biofuels - produced from (is/recently living) biomass

  • crops (that are replanted after harvesting) waste used
  • burnt -> releases CO2, but no net increase as equals the CO2 taken on during growth

Reforestation - planting new trees in existing forests that have been depleted

  • CO2 sink
  • > less CO2 in atmosphere
82
Q

Pros/Cons of Biofuels

A

+ farmers can have government funding/subsidiaries
+ biofuel is cheaper for drivers

  • potential to cause food shortages for consumer
  • potential of forests being cleared for space (conservation issue)
83
Q

Pros/Cons of Wind Turbines

A

+ can increase company sales (ethical perception)
+ electrically based (no CO2 increase)

  • noise pollution
  • ruin landscape
  • birds killed by flying in
84
Q

Evolution (definition)

A

Change in allele frequency

85
Q

Isolation

A

Results in reduced gene flow, causing speciation

Two types:

  • allopatric
  • sympatric
86
Q

Allopatric Speciation

A

Geographical isolation

87
Q

Sympatric Speciation

A

Random mutations result in a change to mating phenotype

E.g. eukaryotes = diploid

  • mutation -> increased chromosome no. = Polyploidy; so becomes reproductively isolated
  • > no fertile offspring
  • potentially asexually reproduce -> new organism

Note: more common in plants

88
Q

Evidence of Evolution

A
  1. Genomics

2. Proteomics

89
Q

Genomics

A

Using DNA technology to determine the base sequence of an organisms genome & the fluctuation of its genes
- allows comparisons
- organisms that genetically diverged more recently should have more similar DNA
E.g. chimps + humans = 94% same
Mice + humans = 84%

90
Q

Proteomics

A

Study of proteins (size, shape & amino acid sequence)

  • sequence coded for by DNA sequence in gene
  • related organisms -> similar DNA sequence
  • more recent divergence = more similar proteins
91
Q

Scientific Validation

A
  1. Peer review
  2. Scientific Journals
  3. Conference’s
92
Q

Peer Review

A

Peers read + review work
Check validity, ergo its supports conclusions
Check that the highest possible standard of experimentation has been conducted

93
Q

Scientific Journals

A

Academic magazines which publish articles (peer reviewed)
Share new ideas, theories, experiments, evidence & conclusions
- repeat experiments
- check it can achieve same results with the same methods
- replication = reliable evidence

94
Q

Conferences

A

Meetings to discuss work

  • lecture or poster presentation
  • face to face Q&A
  • easy sharing + discussion method