Tissue Culture & Immunocytochemistry Part 1/2 Flashcards

1
Q

Standard tissue culture condition?

A
  • Humid
  • 37°C,
  • elevated CO2
  • pH in physiological range (could use phenol red)
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2
Q

List some methods of aseptic technique in the lab

A
  • tissue culture hood
  • laminar flow, -ve pressure, filters
  • alcohol (70% IMS)
  • UV light sterilisation
  • medium containing antibiotics (penicillin and streptomycin)
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3
Q

Define primary cell model

A

Derived directly from tissue

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4
Q

Define secondary cell model

A

Derived from sub-culturing primary culture

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5
Q

Define immoralised cell lines

A

Population of cells from a multicellular organism which would normally not proliferate indefinitely but, due to mutation, can keep undergoing division

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6
Q

Differences between primary cells VS cell lines

A
  • cellular purity
  • no. of cells
  • robustness of cells
  • cell phenotype differentiated vs proliferative
  • animal use
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7
Q

Methods of generating immortalised cell lines

A
  • Isolate from naturally occurring cancer
  • Introducing mutation that partially deregulates cell cycle
  • Hybridoma production i.e. fusion of two cells
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8
Q

Examples of neuronal cell lines

A
  • PC-12 neuroblastoma in rat adrenal medulla
  • SH-SY5y neuroblastoma cells (dopaminergic characteristics)
  • F11-somatic cell hybrid of rat embryonic dorsal root ganglion and rat neuroblastoma cell

NB: Non-physiological outgrowth and not post axotomy

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9
Q

Examples of non-neuronal cell lines

A

3T3 Mouse fibroblast

COS- monkey kidney

CHO- chinese hamster ovary

MDCK- dog epithelial

HeLa- Human epithelial (Henrietta Lacks)

L6- Rat myoblast

293t- human kidney (transformed)

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10
Q

Describe the process of sub-culturing cells

A

Dividing cells become confluent when they cover the bottom of the plate. Contact inhibition prevents them from continuing to divide -> become quiescient

If left, they become senescent

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11
Q

Describe the process of harvesting adherent cells

A

Cells washed with PBS (phosphate buffered saline)

PBS containing trypsin and EDTA is most common solution used

Proteolyitic trypsin cleaves the proteins holding cells together, aided w/ gentle agitation

EDTA chelates calcium and magneusium ions to inhibit cadherin and integrin-dependent cell-cell adhesion

Cells should be detached after 5-10 mins

Trypsin is neutralised now (otherwise it will digest the cells away)

Trypsin inhibitor OR (more routinely): plate is flooded w/ protein solution e.g. equal volume of 10% FCS solution

Centrifugation separates cells from trypsin solution

Unwanted solution is removed form cell pellet and discarded

Pellet can be resuspended in a suitable growth medium

Cell counting on haemocytometer gives cell density

Cells can be plated on fresh plates at the desired density

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12
Q

Examples of neuronal primary cell cultures

A

E16-18 or P0 cortical neurons

Adult DRG

P7 cerebellar granule neurons

E16-18/P0 hippocampal

P0 retinal ganglion cell

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13
Q

Describe how to culture primary cells

A

Culture on adherent substratum coated w/ poly-L-lysine, collagen or laminin

Either clutured in mixed culture w/ other cells, or purified

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14
Q

How can we increase the purity of the cell culture?

A

Fluorescence-acticated cell sorting (FACS): use of antibodies/dyes/genetic tagging to sort cell population

Immunopanning: use of cell-specific antibodies to sort the cell populaiton

Magnetic cell sorting: using antibodies and magnetic tagging to sort cell population

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15
Q

Neurite Outgrowth Assays

Permissive substrates: ______

Inhibitory substrates: ______

A

Neurite Outgrowth Assays

Permissive substrates: PLL/PDL or laminin

Inhibitory substrates: myelin, CSPGs or MAG

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16
Q

Give some examples of in vitro injury models

A
  • scratch assay
  • laser injury
  • growth cone assays
17
Q

What are microfluidic chambers?

A

Make it possible to fluidically isolate cell bodies form axons

2 chambers connected by small microgrooves

Volume is higher on one side = hydrostatic pressure -> fluidically isolates the two compartements

Uses include: axotomy, electrophysiology, co-cultures, small molecules

18
Q

Uses for calcium dyes or genetically encoded calcium indicators (GCaMP)?

A

Investigate neuronal signalling and excitability (as calcium ions act as intracellular signals)

19
Q

Applications for cell cultures?

A
  • Pharm manipulation
  • molecular biology (gene/protein delivery, gene silencing, transgenic ex vivo samples)
  • electrophysiology
20
Q

Disadvantages of neuronal cell lines?

A

DISADV

  • non-physiological growth
  • not multicell env
  • no tissue around cells
21
Q

Disadvantages of primary cell culture

A

DISADV

  • partially multicellular env
  • no tissue around cells
22
Q

Disadvantages of organotypic cultures?

A

DISADV

  • cannot easily discern cell types
  • outgrowth assay difficult
  • lack of vasculature compared to in vivo
23
Q

Advantages of primary culture, neuronal cell lines and organotypic cultures

A

ADV

  • easy manipulation
  • fast interpretation of results
  • synapses intact
  • minics in vivo settings