TG-Rich Lipoproteins and LPLs Flashcards

1
Q

How is dietary fat absorbed?

A

Most dietary fat is found as TAG, which is a major source of energy (30-40%) for the body. This is absorbed by duodenal enterocytes as monoglycerides and free fatty acids, which are produced by the action of bile salts and pancreatic enzymes in the intestine.

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2
Q

What is the role of chylomicrons?

A

These provide an alternative source of fats and cholesterol to LDLs, as they eventually reach the bloodstream after secretion into the lymph vessels.

Instead of providing cells with TAG and cholesterol by being endocytosed, the giant particles instead have the TAG within them hydrolysed by lipoprotein lipase enzymes to release FFAs into the bloodstream, where they are taken up by myocytes and adipocytes. Once they have been largely emptied the chylomicron remnants are cleared by the liver.

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3
Q

How are sterols absorbed in the gut lumen and what are their possible pathways after this?

A

Sterols form mixed micelles in the gut lumen; structures designed to solubilise the dietary and biliary cholesterol by combination with phospholipids and bile acids. Sterols are extracted from these and absorbed by enterocytes at the apical surface using the sterol binding protein NPC1L1.

After absorption by the enterocytes, there are two possible pathways for the sterols that eventually lead to either packaging into chylomicrons or secretion back into the gut lumen for egestion, allowing for control of cholesterol uptake.

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4
Q

What is the net sterol absorption in the gut lumen and what mutation affects this?

A

Net absorption of dietary cholesterol is around 40%, but the figure is significantly lower for plant-derived sterols, >5% of which are esterified and packaged.

However, genetic conditions characterised by loss of function of the ABCG5/8 transporter can lead to high levels of plant sterols in the plasma, a condition called sitosterolaemia.

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5
Q

What enables re-secretion of sterols back into the gut lumen from enterocytes?

A

Secretion of the cholesterol is actively accomplished by a heterodimer of G5/G8 ATP-binding Cassette transporters (ABCG5/8).

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6
Q

How are sterols internalised by enterocytes?

A

This process occurs in enterocytes and hepatocytes, hence the enrichment of Niemann-Pick C1 like 1 (NPC1L1) in the brush-border membrane enterocytes in the proximal jejunum of the small intestine.

NPC1L1 binds into the membrane and concentrates at clathrin coated pits by a cytosolic triskelion binding domain. Once cholesterol has been recruited into this part of the membrane by extraction from mixed micelles by NPC1L1, the area is internalised and taken to an endocytic recycling compartment of the lysosome. During this they are esterified by ACAT2.

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7
Q

How are cholesterol esters sorted in the lysosome?

A

Cholesterol is extracted from the lysosome, both in this pathway and when LDLs are broken down here, by two proteins within the acidic sac: the membrane bound NPC1 (Niemann-Pick C1) and the soluble NPC2.

Cholesterol first binds into NPC2 through hydrophobic interaction with a cavity in the protein and the cholesterol iso-octyl side chain, exposing the 3’-OH to the lysosome interior. This is the same binding mechanism as is used by NPC1L1.

The cholesterol is then transferred to the NPC1, which instead binds it by its hydroxyl group, exposing the hydrophobic side chain and hence leading to insertion of the cholesterol into the lysosome membrane. From here the cholesterol is trafficked to the ER for processing.

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8
Q

How was the cholesterol uptake pathway discovered, and how is it targeted in therapy?

A

This pathway was discovered during a screen for ACAT inhibitors, when a form of the compound now called ezetimibe was found to potently and selectively inhibit uptake of dietary and biliary cholesterol in rodents, without interfering with uptake of TAG, fat soluble vitamins or bile acids. NPC1L1 was subsequently identified through mutation screening of proteins with cholesterol binding domains.

Ezetimibe reduces blood cholesterol as much as 15-20%, an effect which is additive with the inhibition of cholesterol synthesis provided by statins. However, its efficacy in reducing clinical events and improving outcomes is less clear. Also a possible increase in cancer is suggested to associate with combined drug use, so prescription remains controversial.

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9
Q

What is the structure of NPC1L1 and how is it targeted by ezetemibe?

A

The N-terminal domain crystal structure of NPC1L1 (AA 22-265) revealed a fold almost identical to that formed by the homologous NPC1 region, but is larger to allow for a broader sterol substrate specificity. The protein also has a sterol sensing domain (SSD).

The Ezetimibe binding site (amino acids 510-571) is in the first extracellular loop and thus is distinctly separated from that of the cholesterol binding domain.

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10
Q

What mutations are known to occur in NPC1L1?

A

Various rare mutations have been identified that prevent proper cholesterol internalisation in the intestinal cells, which are generally sorted into two classes depending on whether the mutation leads to incorrect folding and ER associated degradation (ERAD) or if the mutation prevents proper trafficking to the plasma membrane.

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11
Q

How are immature TG-rich lipoproteins produced?

A

The current model is that of cotranslational deposition into the ER of the ApoB protein, throughout which microsomal triglyceride transfer protein (MTP) adds small amounts of lipids taken from the cytosolic pool of TG (i.e. a lipid droplet) to the nascent chain, moving the TG droplet into the ER lumen for later addition.

This produces only a small lipoprotein; chylomicrons and VLDLs are formed by addition of more TG by an MTP-independent mechanism.

If insufficient lipid is available for ApoB to assume a stable conformation, the poorly lipidated particles are degraded in the cytosol by the proteasome and/or by lumenal proteases.

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12
Q

How are VLDLs secreted from the liver?

A

In the liver, the small precursors are termed pre-VLDLs. These are trafficked to the Golgi, and are lipidated during transit, meaning that they become VLDL2s by the time they reach the Golgi, where they merge with the tips of the cisternae and transfer through the trans-golgi network.

These can be secreted or further lipidated to form VLDL1 which lead to production of small, dense LDL particles which are particularly susceptible to oxidation and hence strongly pro-atherogenic.

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13
Q

How is the TG-rich lipoprotein production pathway targeted in therapy?

A

Approved by the FDA in 2012 for FH treatment, this prevents the production/secretion of VLDLs and chylomicrons by binding to MTP and directly preventing it from transferring TG to ApoB.

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14
Q

How are TG-rich lipoproteins harvested?

A

As large triglyceride-rich particles (chylomicrons and VLDL) flow through blood capillaries they are acted on by lipoprotein lipase (LPL). The enzyme is bound and displayed on the surface of the endothelium.

Energy-rich triglyceride molecules in the core of the CM/ VLDL particles are hydrolysed to produce two fatty acids and a 2-monoglyceride, which the tissues take up, most commonly by heart and skeletal muscle for energy or adipose for storage. Depletion of the TG store produces CM remnants and LDLs.

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15
Q

What is the structure of LPL?

A

LPL is a head to tail homodimer, so has two N-terminal active sites. Dimerisation enables correct functioning of the catalytic centre – a serine protease triad contained in a hydrophobic groove that is protected from solvent by a lid region.

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16
Q

Where is LPL found?

A

LPL is found bound to the endothelium on heparin sulphate proteoglycans (HSPGs), transiently interacts with the passing TG-rich lipoproteins. Around 40 LPLs can be attached to each structure, allowing each capture of a CM/VLDL to provide large quantities of TG.

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17
Q

How is LPL binding to TG-rich lipoproteins regulated?

A

LPL binding requires ApoCII (a small - 8.8kDa, 79AA - apolipoprotein present in both chylomicrons and VLDLs) as well as ApoB, and is inhibited by the presence of ApoCIII, thus lipolysis of CMs and VLDLs can be controlled by regulation of their apolipoprotein content. The binding site of ApoCII to LPL is unknown.

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18
Q

How is LPL activated other than by Apolipoproteins?

A

The serpin catalytic triad (Ser-132, Asp-156, His-241) can be covered by a lid domain that prevents lipolysis or unintended other catalysis. The active site is uncovered by the binding of TG to the C-terminal domain.

19
Q

What extra endothelium expressed element aids LPL activity?

A

Several other factors are important for facilitating and maintaining the catalytically active dimers. One is GPI-HBP1, which is expressed at high levels in heart, adipose tissue, and skeletal muscle—the same tissues that express high levels of LPL. GPI-HBP1 is now known to bind to and transport active LPL dimers from the sub-endothelium to the luminal face of the capillary endothelium from the parenchymal cells that produced it, and assist in its display.

20
Q

What role does GPI-HBP1 play when displayed on the endothelium?

A

Expression of GPI-HBP1 protein in cultured cells confers the ability to bind both LPL and chylomicrons, strongly suggesting that the protein is a platform for the LPL-mediated processing of chylomicrons in capillaries.

GPI-HBP1 (glycosylphosphatidylinositol-anchored HDL-binding protein 1) comprises a 17-25 residue long stretch of highly acidic amino acids, followed by a cysteine rich Ly6 motif which interacts with chylomicrons via an adaptor protein called ApoAV.

21
Q

Describe the LPL folding pathway.

A

LPL is cotranslationally deposited into the ER lumen, where is forms partially folded monomers. These are folded by the C-loop of LMF1, in a calcium dependent process. When catalytically activated in this way they can then form full homodimers and be trafficked out of the ER. Misfolded ones are targeted for ERAD.

The LMF1 protein itself has 5 alpha-helical transmembrane segments that divide the protein into 6 separate domains. The C-loop is a lumenal part of the evolutionarily conserved DUF1222 (Domain of Unknown Function) domain.

22
Q

What inhibits LPL?

A

Another important negative regulator of LPL activity is Angiopoietin-like-4 (Angptl-4), a 45-65 kDa glycosylated member of the angiogenic angiopoietin signalling family, secreted by several tissues including in the liver, adipose and muscle.

23
Q

How does Angptl-4 inhibit LPL?

A

Angptl-4’s N-terminal coiled domain interacts reversibly with LPL, preventing formation of LPL dimers. Although the LPL monomer remains sufficiently folded to retain potential for LPL-LPL dimer formation and catalytic activity, the LPL-Angptl-4 complex is largely inactive.

Although Angptl-4 may interact with LPL in the interstitial space (en route to the endothelium from the parenchymal cells), it appears to mainly act extracellularly. Recent studies show that it can inhibit LPL even when the enzyme is complexed to GPI-HBP1.

24
Q

What is Hyperchylomicronaemia? How rare is it?

A

AKA Type I hyperlipoproteinaemia, this is a genetic disorder characterised by the failure to metabolize chylomicrons.

Clinical symptoms can include eruptive xanthomas and pancreatitis, but for many patients there is no major increased risk of coronary heart disease.

Although severe hypertriglyceridaemia can be relatively common (1:5000), true hyperchylomicronaemia is recessive and rare (1 in a million; though this is 1 in 10,000 in Quebec due to a founder effect).

25
Q

What are the main causes of familial hyperchylomicronaemia?

A

The classical cause is lipoprotein lipase deficiency, although defects in its cofactor, ApoCII/III, and other proteins identified more recently such as LMF1, can also lead to the disease.

26
Q

How can LPL be mutated in familial hyperchylomicronaemia?

A

Most of the mutations associated with this gene are clustered in exons 5 and 6, with G118E being the most common (responsible for 25% of all UK LPL deficiencies).

27
Q

What atheroprotective LPL mutation exists?

A

Around 20% of the population already have a Ser-447-Stop nonsense gain-of-function mutation which increases LPL activity, protecting against CVD. Gene therapy trials to introduce this gene into the patients’ muscle tissue.

28
Q

How can ApoCII mutations lead to familial hyperchylomicronaemia?

A

The ApoCII gene is 4kb long and contains 4 exons. Several point mutations have been found to produce defective CII which can lead to hyperchylomicronaemia if they lead to negligible protein amounts.

29
Q

How can ApoCIII mutations lead to familial hyperchylomicronaemia?

A

A null mutation in ApoCIII, R19X, has recently been identified as causing a favourable lipoprotein profile, and antisense drug trials are currently underway to try to replicate this.

Intriguingly, inhibition of ApoCIII in patients with genetic deficiency of LPL was also relatively effective – presumably by stimulating an LPL-independent pathway.

30
Q

How can LMF1 mutations lead to familial hyperchylomicronaemia?

A

Nonsense mutations that disrupt the C-terminal domain of LMF1, such as Y439X and W464X, prevent it from properly folding LPL or HL and EL (hepatic and endothelial lipases), leading to combined lipase deficiency.

31
Q

What are the half lives of VLDLs compared to chylomicrons?

A

VLDLs - 20hrs

CMs - 10mins

32
Q

By what mechanism is ApoB48 expressed in enterocytes?

A

This appears to rely on an almost unique form of post-transcriptional modification, in which an enterocyte specific enzyme (apobec-1 and associated editing complex) is expressed that alters a single base (C to U) in the apo B mRNA code to produce a stop codon, terminating the translation of the 14.1kb transcript 48% of the way through to give the N-terminal 2152 residues instead of the full 4563. This mechanism has since been identified in a handful of other genes also.

33
Q

Describe the editing complex of ApoB48.

A

The editing complex is constructed from a number of proteins, two of which are RNA binding – apobec-1 and ACF. The C to U editing of ApoB100 RNA takes place in the nucleus of intestinal enterocytes.

The region flanking the edited base is an AU rich stem loop (with the C in the terminal loop) and contains two important elements in immediate proximity to the targeted cytidine: an 11-nucleotide region downstream of the edited base referred to as the “mooring sequence”; and a second region, spanning the mooring sequence and immediately downstream of the edited base, contains a consensus binding site for apobec-1, the catalytic deaminase which, along with ACF, is responsible for C to U conversion.

34
Q

Why do FH patients have normal CM levels?

A

Not only do chylomicrons use ApoE for uptake recognition instead of ApoB, they also are mostly endocytosed by a different receptor – LDL-R Related Protein (LRP) – hence the normal chylomicron levels of FH patients as mutations in the LDLR pathway have no effect.

35
Q

Describe the structure of LRP.

A

The largest known membrane protein, LRP is the equivalent of 4 LDLRs, with 31 ligand binding repeats, 22 EGF repeats and two NPXY motifs, contrasting with the respective 7, 3 and 1 found on LDLRs. This protein binds ApoE and ApoB48, but not ApoB100.

36
Q

In what tissue structure are CM remnants and IDLs/LDLs taken up?

A

Clearance of CM remnants occurs in the perisinusoidal space (Space of Disse), which is located between a hepatocyte and a sinusoid (small blood vessel) and acts to trap or prolong the residence time of the CM remnants, allowing additional action of hepatic lipase and acquisition of ApoE molecules.

The endothelial cells lining the sinusoid are fenestrated with openings of ~100 nm diameter, and hence are often called ‘sieve-plates’. This prevents entry (and hence uptake) or larger/mature CMs and VLDLs, while allowing CM remnants, LDLs and HDLs through. Hepatocyte microvilli do tend to extend into this space to allowing interaction with/absorption of plasma proteins.

37
Q

By what mechanism are CMs endocytosed in the perisinusoidal space?

A

The actual uptake mechanism for CM remnants appears to involve not only LRPs, but also LDLRs and HSPGs, which are abundant in the perisinusoidal space and on the surface of hepatocytes.

ApoE and HSPG are secreted by hepatocytes, with the HSPG displaying the ApoE for the CM remnants. This leads to enriching the CM remnant in ApoE, with the help of HL, thus helping the CM remnant to bind to the receptors and be endocytosed. This is called the secretion capture model.

38
Q

What is the structure of ApoE in solution?

A

Secreted APOE is a 34-kDa (299 residues) glycoprotein with an O-glycan chain at Thr194. ApoE is polymorphic due to single base mutations, which give rise to amino acid substitutions.

ApoE has a very different structure in aqueous solution compared to the extensive conformational changes that takes place when it binds lipid in the surface of a lipoprotein particle. In solution it is composed of an N-terminal four helix bundle and a C-terminal helical lipid binding domain. Upon binding the lipoprotein, the conformation changes to a large horseshoe shape – albeit one too small to fit around a mature CM.

39
Q

What are the isoforms of ApoE?

A

The three common isoforms of ApoE differ in two amino acid positions:

ApoE2 (Cys-112 and Cys-158; ~8% of the population)
ApoE3 (Cys-112 and Arg-158; ~77%), the most prevalent/wild-type protein
ApoE4 (Arg-112 and Arg-158; 15%)

40
Q

What are the ApoE isoforms associated with outside of lipid metabolism?

A

ApoE isoforms are associated with several diseases, including heart disease & stroke, Alzheimer’s disease and viral infections (HIV, herpes simplex virus [HSV], and hepatitis C virus [HCV]). These associations reflect the disparate roles that ApoE carries out, some related to lipid transport and others to cell signalling functions.

41
Q

How do the three ApoE isoforms compare in terms of lipoprotein binding?

A

The lipoprotein binding domain contains several positively-charged amino acids, namely Arginine, Lysine and Histidine.

ApoE2, which lacks an Arginine residue (Arg158Cys), has defective binding, while ApoE4, which gains one (Cys112Arg), has normal or increased binding.

42
Q

Describe the lipoprotein binding region of ApoE.

A

The binding region of ApoE is centred around amino acids 140-150, which contains 7 positively-charged residues (Arg, Lys & His). Within this region three very rare mutations have been recorded, which result in reduced binding activity due to loss of a positive charge (R142C, R146C and L146Q).

43
Q

How does the ApoE2 isoform variant affect lipoprotein binding and why?

A

Although the ApoE2 isoform’s amino acid substitution is outside the 140-150 domain (R158C), this still has a disruptive influence. In wild-type ApoE3, a salt bridge is formed between R158 and N154 an interaction not possible in ApoE2; hence a bridge tends to form between R150 and N154 which has a knock-on effect within the 140-150 domain to disrupt binding affinity.

44
Q

What disorders can be associated with ApoE2 isoform posession?

A

A small proportion of individuals homozygous for ApoE2 have a disease called type III hyperlipoproteinaemia, which is characterised by the accumulation of remnant lipoproteins due to lack of ApoE activity.

However most of those homozygous for E2 in fact have hypolipidaemia, because the lack of CM remnant uptake in the liver leads to overexpression of LDLR and hence greater uptake of plasma LDL.