Test 1 (Module 1) Flashcards

1
Q

What are limiting factors of Cell size?

A

Cell size is limited by:

1) the volume of cytoplasm that can be supported by the genes in the nucleus
2) the volume cytoplasm that can be supported by exchange of nutrients
3) the distance over which substances can efficiently travel through the cytoplasm via diffusion

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What are HeLa cells?

A

Cultured tumor cells that were isolated from a cancer patient (Henrietta Lacks) by George Gey in 1951. They are used in research today.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What are the central differences between Prokaryotic and Eukaryotic cells?

A

Complexity: Prokaryotes are relatively simple; eukaryotes are more complex in structure and function

Amount: Eukaryotes have much more genetic material

Form: Eukaryotes have many chromosomes made of both DNA and protein whereas prokaryotes have a single circular DNA

Cytoplasm: Eukaryotes have membrane-bound organelles and complex cytoskeletal proteins. While both have ribosomes, they differ in size

Cellular Reproduction: Eukaryotes divide by mitosis; prokaryotes divide by simple fission

Locomotion: Eukaryotes use both cytoplasmic movement, and cilia and flagella; prokaryotes have flagella but they differ in both form and mechanism

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What are the Two Types of Prokaryotic Cells? What are examples of each?

A

1) Domain Archaea: Methanogens, Halophiles, Acidophiles, Thermophiles

2) Domain Bacteria:
Includes the smallest known cells - mycoplasma
Includes cyanobacteria, some photosynthetic bacteria Cyanobacteria gave rise to green plants and an oxygen-rich atmosphere
Some bacteria are capable of nitrogen fixation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What are the primary Model Organisms used for research purposes?

A

There are six (6) model organisms:

1) the bacterium Escherichia coli
2) the yeast Saccharomyces
3) the mustard plant Arabidopsis
4) the nematode Caenorhabditis elegans
5) the fruit fly Drosophila melanogaster
6) the mouse Mus musculus

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Discuss some characteristics of the Semipermeable Lipid Bilayer, then discuss the main roles of Epithelial cells.

A

Semipermeable lipid bilayer: osmotic pressure, [charges], [P-] inside cell is much greater than outside cell in the plasma, electrolytes [Ca2+, Na+, Cl-, K+]

Epithelial cells: 1) protection, 2) absorption, 3) secretion (endocrine)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Discuss the characteristics of Multicellular organisms.

A

Differentiation occurs (terminally differentiated cells, pluripotency), but stem cells and gametes also present (totipotent). Even though cells differentiate, adaptation occurs as they respond to physiological pressures such as hormones, steroids, and stress. The can switch to a different phenotype but not a completely different kind of cell (dedifferentiation). For example, fibroblasts can differentiate to adipocytes due to the presence of hormones (cortisol). Importantly, there is significant plasticity and flexibility with multicellular organisms (eg. neurogenesis in CNS).

The cells share: genome/RNA, organelles (ribosomes, mitochondria), membrane/cell wall, cytoplasm, Pr- (including enzymes, structural/histones, carrier, channel and receptor proteins)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What are the Major Roles of the Plasma Membrane?

A
  • Protection (from pathogens)
  • Signaling (responding to external signals, intra and intercellular interaction; energy transduction)
  • Fusion/Splitting of cells
  • Transport/Selectively Permeable Barrier (endocytosis/exocytosis)
  • Osmotic Pressure [gradient]
  • Electrical Charge
  • Compartmentalization (creating a specific environment/conditions for various functions)
  • Scaffolding for biochemical activities (the shape affects functional capabilities)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Discuss the Plasma Membrane Structure.

A
  • Lipid Bilayer (hydrophilic head, hydrophobic tail)
  • Protein-lined pores punctuate the contour of the cell membrane; this is a key to polar solute and ion movements
  • Fluid-Mosaic Model is current understanding. The lipid bilayer exists in fluid state, capable of movement itself.
  • Includes: peripheral Pr-, hydrophobic alpha helix, integral Pr-, cholesterol, phospholipids, glycoproteins, glycolipids, oligosaccharides, etc.
  • Chemical Composition; lipid and Pr- components bound by non-covalent bonds, and contains carbohydrates
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Why are Carbohydrates important in the Plasma Membrane?

A

They reinforce the structural integrity of membranes, and are important in presenting receptors for identification (antigens) and communication (eg. RBC and blood type/Rh Factor)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Why are Saturated and Unsaturated Lipids important in the structural integrity of the plasma membrane?

A

Combining both types allows for greater size/thickness with fewer molecules–while still maintaining structural integrity–due to the linear and kinked nature of saturated and unsaturated lipids respectively.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

When would a cell need to change the shape/confirmation of its Plasma Membrane?

A
  • phagocytosis
  • extravasation
  • locomotion
  • secretion
  • fusion (embryogenesis)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

How does a cell membrane expand, as in cellular division?

A

Cell membranes come from other cell membranes (it is not a de novo process)

Cells produce the lipid components via golgi bodies to expand existing components

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Lipids are much more dynamic than previously thought. How so?

A

Integral membrane proteins, peripheral membrane proteins (non-covalently linked), and GPI-anchored protein (covalent linkage) allows them to participate in various movements, many of which are continuous, and this allows the membrane to remain a dynamic structure.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Understanding the topography of the membrane allows us to draw conclusions about membrane “sidedness”–which is to say where and how much protein is distributed throughout. Proteins embedded in the plasma membrane are anchored more prevalently on one side of the lipid bilayer of the other. What methods might we use to determine this sidedness of proteins?

A
  • if it is located inside the cell membrane, use an enzyme
  • GFP
  • antibodies
  • florescence
  • radioactivity/radioactive markers
  • Western Blot
  • We can use data/fxn/known similar activity of a given target receptor/molecule to determine its likely structure in cases where direct study of the structure is not possible
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

On an electron micrograph, what is an identifying feature of the plasma membrane?

A

It exhibits a trilaminar appearance.

17
Q

How does temperature affect the characteristic fluidity of Membranes in animals?

A

Maintaining the fluidity of the plasma membrane and its liquid-crystal dynamic is essential to life. In higher temperature environments, a higher degree of saturation is observed, whereas in lower temperature environments the lower the degree of saturation (and thus higher degree of unsaturation; this is why omega-3 fatty acids are found in cold water fish).

18
Q

What are two distinct units of organization observed in lipids?

A

1) Rafts, which allow specific anchoring of Pr-, and

2) Islands, which allow Pr- clustering

19
Q

What are the primary Membrane Functions?

A
  • Compartmentalization (membranes form continuous sheets that enclose intracellular compartments)
  • Scaffold for Biochemical Activities (provide a framework that organizes enzymes for effective interaction)
  • Selectively Permeable Barrier (allow regulated exchange of substances between compartments)
  • Transporting Solutes (membrane Pr- facilitate movement of substances bt/wn compartments)
  • Responding to External Signals (membrane receptors transduce signals from outside the cell in response to specific ligands)
  • Intracellular Interaction (membranes mediate recognition and interaction bt/wn adjacent cells)
  • Energy Transduction (transduce photosynthetic energy, convert chemical energy to ATP, and store energy)
20
Q

What are some structural and functional implications of the Lipid Bilayer?

A

2:1 ratio of lipid to cell surface area. The most energetically favored orientation for the polar head groups is facing the aqueous compartments outside the bilayer. The physical state is determined by the composition of the lipids, and cohesion among the bilayers form continuous sheets that make cells deformable and facilitates splitting and fusion of membranes.

21
Q

What kinds of molecules are enabled by Protein-lined Pores in the membrane?

A

Polar solutes and Ions.

22
Q

What kind of bond do we observe between lipid and protein components of the membrane?

A

Non-covalent bonds.

23
Q

In the Fluid-Mosaic Model of the membrane, a mosaic of particles are found penetrating the lipids. List several examples.

A

Peripheral Pr-, Hydrophobic alpha-helix, Integral Pr-, Cholesterol, Phospholipid, Glycolipid, Glycoproteins, Oligosaccharides

24
Q

What does “Amphipathic” mean?

A

A chemical compound (in this case lipids) which possess both hydrophilic and hydrophobic (aka, lipophilic) properties. This is a characteristic property of Lipid Polymorphism, which describes how lipids aggregate.

25
Q

What are the three main types of Membrane Lipids?

A

1) Phosphoglycerides: are diacylglycerides with small functional head groups linked to the glycerol backbone by phosphate ester bonds.
2) Sphingolipids: are ceramides* formed by the attachment of sphingosine to fatty acids. [*ceramides are a family of lipid molecules composed of sphingosine and a fatty acid; it is now known that in addition to a structural role, they are involved as a signaling molecule that assists with differentiation, proliferation, and apoptosis]
3) Cholesterol: a smaller and less amphipathic lipid that is only found in animals.

26
Q

Name a common example of a lipid bilayer that assembles spontaneously in aqueous solution.

A

Liposomes.

They are investigated in the use as a drug delivery system.

27
Q

What are the three distinct classes of Membrane Proteins?

A

1) Integral Membrane Proteins
2) Peripheral Membrane Proteins
3) GPI-Anchored Proteins

28
Q

Discuss the characteristics of Integral Membrane Proteins.

A

They are amphipathic, with hydrophobic domains anchoring them in the bilayer and hydrophilic regions forming functional domains outside of the bilayer.

Channel Pr- have hydrophilic cores that form aqueous channels in the membrane-spanning region.

29
Q

What technique do we use to investigate the distribution of Integral Proteins?

A

Freeze-Fracture Analysis. This technique divides the phospholipid leaflets of the membrane. Integral membrane Pr- appear as bumps and pits using an electron microscope, and the heterogeneity of their distribution can be observed.

30
Q

What is characteristic of a Membrane-Spanning Domain?

A

A string of 20-30 hydrophobic AA as determined by hydropathy plots.

31
Q

How do we study the Structure and Properties of Integral Membrane Proteins?

A
  • Site-directed mutagenesis, which is replacing specific AAs with others, allowing us to identify some spatial relationships.
  • Electron spin resonance identifies some conformational changes that occur when integral Pr- function.