Test 1 - Cell, Chemistry, Metabolism Flashcards

1
Q

Levels of Structural Organization & Body Systems

A
  1. Chemical (atoms)
  2. Cellular (smooth muscle cell)
  3. Tissue (smooth muscle tissue)
  4. Organ (stomach)
  5. System (digestive)
  6. Organism (people)
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2
Q

Integumentary System

A
Components
    -Skin
    -Hair
    -Fingernails
    -Toenails
    -Sweat glands
    -Oil glands
Functions
    -Helps protect body
    -Regulate body temperature
    -Eliminates some waste
    -Makes vitamin D
    -Detects sensations like touch, pain, warmth/cold
    -Stores fat and provides insulation
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3
Q

Skeletal System

A
Components
    -Bones
    -Joints
    -Associated cartilages
Functions
    -Supports and protects the body
    -Provides surface area for muscle attachment
    -Aids body movement
    -Houses cells that produce blood cells
    -Stores minerals and lipids
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4
Q

Muscular System

A
Components
    -Skeletal muscle tissue (usually attached to bones)
    -Smooth muscle tissue
    -Cardiac muscle tissue
Functions
    -Participates in body movements such as walking
    -Maintains posture
    -Produces heat
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5
Q

Nervous System

A

Components
-Brain
-Spinal cord
-Nerves
-Special sense organs like eyes and ears
Functions
-Generates action potentials (nerve impulses) to regulate body activities
-Detects changes in body’s internal and external environments and responds by causing muscular contractions or glandular secretions

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6
Q

Endocrine System

A

Components
-Hormone-producing glands
-Pineal, hypothalamus, pituitary,
thymus, thyroid, parathyroid, adrenal, pancreas,
ovaries, testes
Functions
-Regulates body activities by releasing hormones (chemical messengers transported in blood from endocrine gland or tissue to target organ)

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7
Q

Homeostasis

A

A condition of equilibrium, or balance, in the body’s internal environment

Homeostasis is maintained by regulatory processes

The survival of our body cells is dependent on the precise regulation of the chemical composition of their surrounding fluid. This fluid is known as extracellular fluid.

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8
Q

Fluid Compartments

A
Solids
    -Women = 45%
    -Men = 40%
Fluids
    -Women = 55%
    -Men = 60%
    -Of the fluids, 2/3 are intracellular fluid, and 1/3 are extracellular fluid made up of 80% interstitial fluid and 20% plasma

Women have more fat on average than males, and males more muscle. Fat has little water content compared to muscle, causing the difference in percentages.

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9
Q

Control of Homeostasis

A
  1. Stimulus disrupts homeostasis by increasing/decreasing a
  2. Controlled condition that is monitored by
  3. Receptors that send nerve impulses or chemical signals to a (input)
  4. Control centre that receives the input and provides nerve impulses or chemical signals to (output)
  5. Effectors that bring about a change or
  6. Response that alters the controlled condition

Return to homeostasis when the response brings controlled condition back to normal

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10
Q

Homeostasis Imbalances

A

When homeostasis is disrupted, disease, disorder, and even death may result.

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11
Q

Basic Principles of Chemistry

A
  1. Chemistry is the science of structure and interactions of matter
  2. Matter is anything that has mass and takes up space
  3. Mass is the amount of matter a substance contains, whereas weight is the force of gravity acting on a mass
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12
Q

Chemical Elements

A

Matter exists in 3 forms

- Solid
- Liquid
- Gas

All forms of matter are composed of chemical elements

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13
Q

Elements

A

Elements are given chemical symbols such as

- O = oxygen
- C = carbon
- H = hydrogen
- N = nitrogen

These elements make up the majority (96%) of our bodies

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14
Q

Atoms

A

Atoms are the smallest units of matter that retain the properties and characteristics of an element
-Atoms are composed of protons, neutrons, and electrons

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15
Q

Atomic Number and Mass Number

A

Atomic number is the number of protons in the nucleus of an atom

Mass number is the number of protons and neutrons in an atom

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16
Q

Isotopes

A

Nearly all elements have two or more structural variations

- Number of protons is always the same
- Number of neutrons varies therefore the mass number varies
- Number of electrons is always the same
- Most isotopes are stable (their nucleus structure doesn't change over time)
- Unstable isotopes are called radioisotopes and as their nucleus decays they emit radiation and often transform into a different element
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17
Q

Atomic Mass

A

The atomic mass/weight of an element is the average mass of all its naturally occurring isotopes

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18
Q

Ions, Molecules, and Compounds

A

Ion is an atom that has lost or gained an electron

- Cation (+) has lost one electron
- Anion (-) has gained one electron

Molecule has 2 or more atoms bonded together

Compound is a substance that can be broken down into 2 or more different elements

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19
Q

Chemical Bonds

A

Bonds act as powerful “glues” to hold atoms together in molecules

Atoms become chemically stable when their valence (outer) electron shell is full
-1st she’ll holds 2 electrons, others hold 8

Achieve stability by gaining, losing, or sharing electrons

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20
Q

Ionic Bonds

A

Formed by the transfer of one or more electrons from one atom to another. Mainly found in teeth/bones where they give strength

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21
Q

Covalent Bonds

A

Atoms share pairs of valence electrons. Most of the body’s structure is made from molecules containing this type of bond. Are strong bonds are the greater the number of shared bonds the stronger the bond

Polar covalent bonds have unequal sharing of electrons

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22
Q

Hydrogen Bonds

A

Form between or within molecules due to partial charges created by polar covalent bonds involving H. Weak bonds that break/reform easily. Important links in proteins and nucleic acids

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23
Q

Chemical Reaction

A

A chemical reaction occurs when new bonds are formed or old bonds are broken

- Reactants = starting substances
- Products = ending substances
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24
Q

Types of Chemical Reactions

A
Synthesis (anabolic)
    -A + B --> AB
Decomposition (catabolic)
    -AB --> A + B
Exchange (anabolic and catabolic)
    -AB + CD --> AD + BC
Reversible (products can revert to original reactants)
    -A + B  AB
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25
Q

Mixtures

A

Substances composed of two or more components that are physically blended together, but not bonded together. Most matter in nature exists this way
Solution
-Liquid that contains dissolved substances
Liquid = solvent Substance = solute
-Once mixed together, solutes remain evenly dispersed among the solvent molecules
-Clear because the solute particles are very small
Suspension
-Liquid that contains undissolved substances
-Suspended substances with settle out
-Not clear as the particles are large

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26
Q

Inorganic Compounds

A

Usually lack carbon and are simple molecules

- Wager is the most important and abundant inorganic compound in all living things
- Acids, bases, and salts are also inorganic
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27
Q

Water in Chemical Reactions

A

Water is the ideal medium

- In a hydrolysis reaction, water is added to break bonds
- In a dehydration synthesis reaction, water is removed to make bonds
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28
Q

Acids, Bases, & Salts

A

Acid
-In water they dissociate in to H+ (hydrogen ions, protons) and anions (protein donors)
Bases
-In water they dissociate into OH- (hydroxyl ions) and cations (proton acceptors)
Salt
-In water they dissociate into cations and anions, neither of which is H+ and OH-

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29
Q

pH

A

Measure of acid/base concentration

- More H+ --> more acidic
- More OH- --> more basic (alkaline)
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30
Q

Organic Compounds

A

Organic compounds always contain H, usually contain O, and always have covalent bonds

Larger molecules than inorganic a with complex functions

Carbohydrates, lipids, proteins, nucleic acids, and adenosine triphosphate (ATP)

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31
Q

Carbohydrates

A

Contains C, H, O

Carbohydrates provide most of the energy (ATP) needed for life

About one pound of carbohydrate in the form of glycogen is stored in the body
     *excess carbs get stored as fat
Major carbohydrate groups
    -Monosaccharides
    -Disaccharides
    -Polysaccharides
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32
Q

Lipids

A

Primarily composed of C,H,O, occasionally containing P, N

Not soluble in water

Soluble in nonpolar solvents like alcohol or acetone

Types of Lipids

- Fatty acids
- Triglycerides (fats and oils)
- Phospholipids
- Steroids (cholesterol, bile salts, vitamin D, adrenocortical hormones, sex hormones)
- Eicosanoids (prostaglandins, leukotrienes)
- Others (carotenes, vitamin E & K, lipoproteins)
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33
Q

Fatty Acids

A

Building blocks of other lipids

Can be saturated or unsaturated

Catabolized to make energy (ATP)

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34
Q

Triglycerides

A

Most plentiful lipid in our diet and our body

At room temperature fats (animal origin) are solid and oils (plant origin) are liquid

Composed of glycerol which is a 3 carbon molecule and 3 FA which vary resulting in many different TG molecules

Provide protection, insulation, and energy (ATP)

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35
Q

Phospholipids

A

Phospholipids are an important component of cell membranes

Polar head, and nonpolar tails.

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36
Q

Steroids

A

Have 4 rings of carbon atoms

Cholesterol is a steroid (made by the liver, also in our diet) that is used to synthesize other steroids including sex hormones, cortisol, bike salts and vitamin D

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37
Q

Protein

A

Always contain C, H, O, N, and some some S

More complex in structure and function than carbs or lipids

Proteins give structure to the body, regulate processes, provide protection, assist in muscle contraction, transport substances, and serve enzymes

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38
Q

Amino Acids

A

Peptides and proteins are formed by combining various amino acids

- Dipeptide = 2
- Tripeptide = 3
- Peptide = 4-9
- Polypeptide = 10-50
- Protein = more than 50
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39
Q

Enzymes

A

An enzyme is a catalyst in a living cell

A catalyst is a dis stance that increases the rate of chemical reactions
-Not chemically changed in the reaction
-Not part of the product
Enzymes are
-Specific to and often named for their substrate
-Extremely efficient and without them most reactions in the body would be too slow to maintain life
-Work by properly orientating the reactants so they react quicker with each other
-Usually have the suffix ase

40
Q

DNA (deoxyribonucleic acid) & RNA (ribonucleic acid)

A

Huge organic molecules that contain C, H, O, N, P

Composed of nucleotides (nitrogen base, sugar and P group)

DNA forms the genetic code in the nuclei of body cells and regulates most of the cells activities

RNA guides protein synthesis

41
Q

Adenosine Triphosphate

A

ATP is the principal energy-storing molecule in the body

Provides energy for cellular work

42
Q

Parts of the Cell

A
  1. Plasma (cell) membrane
  2. Cytoplasm
    • Cytosol
    • Organelles
  3. Nucleus
    • Chromosomes
    • Genes
43
Q

Plasma Membrane

A

The plasma membrane is a flexible her sturdy barrier that surrounds and contains the cytoplasm of the cell

44
Q

Membrane Proteins

A

Integral (also called transmembrane)

Peripheral

Membrane proteins can serve a variety of functions

The different proteins help determine many of the functions of the cell membrane

45
Q

Membrane Fluidity

A

Membranes are fluid structures because most of the membrane lipids and many of the membrane proteins move easily in the bilayer
-Membrane lipids and proteins are mobile in their own half of the bilayer

Cholesterol serves to stabilize the membrane and reduce membrane fluidity

Glycolipids/proteins are part of the “sugar coating” of cells that serve as biological markers so cells can recognize each other

46
Q

Membrane Permeability

A

Plasma membranes are selectively permeable

- The lipid bilayer is always permeable to small, nonpolar, uncharged molecules
- Transmembrane proteins that act as channels or transporters increase the permeability of the membrane
- Macromolecules are only able to pass through the plasma membrane by vesicular transport
47
Q

Gradients Across the Plasma Membrane

A

A concentration gradient is the different in the concentration of a chemical between one side of the plasma membrane and the other

An electrical gradient is the difference in concentration of ions between one side of the plasma membrane and the other

Together, these gradients make up an electrochemical gradient

48
Q

Transport Across the Plasma Membrane

A

Transport processes that move substances across the cell membrane are

- Passive processes
    - Simple diffusion
    - Facilitated diffusion
    - Osmosis
- Active processes
    - Active transport
    - Vesicular transport
49
Q

Diffusion

A

Tendency of particles to scatter every throughout the environment due to the particle’s kinetic energy

Results in particles moving away from their area of highest concentration

Diffusion is influenced by

- Steepness of the concentration gradient
- Temperature
- Mass of diffusion substance
- Surface area
- Diffusion distance
50
Q

Simple Diffusion

A

Occurs when particles cross membranes without the help of membrane proteins

51
Q

Facilitated Diffusion

A

Transmembrane proteins help solutes that are too polar or too highly charged move through the lipid bilayer

The processes involved are

- Channel mediated facilitated diffusion
- Carrier mediated facilitated diffusion
52
Q

Osmosis

A

The net movement of a solvent (water) through a selectively permeable membrane from an area of high concentration to an area of low concentration.

Osmotic pressure is the pressure that would prevent water movement and is proportional to solute concentration
-Increase solute increase osmotic pressure

53
Q

Tonicity

A

Relates to how the solution influences the shape of body cells

- Isotonic will not change the shape
- Hypotonic will cause the cell to undergo hemolysis (expand)
- Hypertonic will cause the cell to undergo crenation (shrivel up)
54
Q

Active Transport

A

Energy derived from ATP changes the shape of a transporter protein which pumps a substance across a plasma membrane against its concentration gradient

55
Q

Vesicular Transport

A

Vehicle is a small membranous sac formed by budding off an existing membrane

Allows large molecules to enter/exit cells

Two processes

- Endocytosis where particles move into cells
    - Phagocytosis
    - Pinocytosis
- Exocytosis where particles move out of the cells
56
Q

Phagocytosis

A

“Cell eating” where a cell engulfs a particle

57
Q

Pinocytosis

A

“Cell drinking” where the cell “gulps” droplets of extracellular fluid

58
Q

Exocytosis

A

Membrane-enclosed secretory vesicles fuse with the plasma membrane and release their contents into the extracellular fluid

Ejected materiel may be either waste product (remnants of dead bacteria) or a useful secretory product (digestive enzymes, hormones)

59
Q

Cytoplasm

A

Cytosol is also known as the intracellular fluid portion of the cytoplasm

Organelles are the specialized structures that have specific shapes and perform specific functions

60
Q

Cytoskeleton

A
Network of protein rods throughout the cytoplasm maintains shape and organization of cellular contents
Responsible for cell movements
Microfilaments (look like bead bracelet)
    -Actin in the protein
    -Function in muscle contraction, cell division, cell locomotion, mechanical support for cell extensions
Intermediate filaments (woven rope)
    -Very strong
    -Helps cells resist pulling forces
Microtubules (hollow tubes)
    -Composed of tubulin protein
    -Assemble/grow out of the centrosome
    -Determine fell shape, movement of vesicles, chromosomes, cilia, and flagella
61
Q

Centrosome/Centrioles

A

Pericentriolar material contains tubulins, which are used for the production of mitotic spindle and other microtubules

62
Q

Cilia & Flagella

A

Motile cell surface projections

Cilia propel fluids over cell’s surface

Flagella moves the entire cell

63
Q

Ribosomes

A

Small granules that function in protein synthesis

Found in two locations in the cell either free floating (make protein used in the cell), or attached to rough endoplasmic reticulum (make proteins for incorporation into cell membranes/vesicles) or for export from the cell

Can switch back and forth depending on the protein type required

64
Q

Endoplasmic Reticulum

A

Network of flattened sacs continuous with nuclear membrane

Rough ER
-Synthesis of glycoproteins and phospholipids that are packaged into transport vesicles and sent to the Golgi complex

Smooth ER
-Synthesis of FA and steroids, detoxification of drugs, storage of calcium in muscle cells

65
Q

Golgi Complex

A

Stacked/flattened membranous sacs

Modifies, concentrates, and packages proteins and lipids received from the rough ER

66
Q

Lysosomes

A

Membrane enclosed vesicles that form from the Golgi complex

Contains about 60 powerful digestive enzymes

Functions

- Digestion of worn out organelles
- Extracellular digestion
- Digestion of bacteria etc. that have entered the cell by phagocytosis
67
Q

Peroxisomes

A

Structures that are similar in shape to lysosomes, but are smaller and contain enzymes that use oxygen to oxidize (break down) organic substances

68
Q

Proteasomes

A

Barrel-shaped structures that destroy unneeded, damaged, or faulty proteins by cutting long proteins into smaller peptides

69
Q

Mitochondria

A

Cigar shaped

Contains outer membrane, inner membrane, matrix, and cristae

Function to generate most of the cells ATP

Contain their own DNA, RNA, and ribosomes and are capable of reproducing themselves when required

Arose from ancient bacteria that invaded plants and animals

70
Q

Nucleus

A

Circular/oval

Most prominent feature of the cell consisting of a nuclear envelope with pores, nucleoli (ribosome synthesis) and DNA

All cells originally had one

Contains the cells genes

46 chromosomes only visible in a dividing cell

In non-dividing cells, it’s a granular mass called chromatin

71
Q

DNA Replication

A

An exact copy of DNA is made in preparation for cell division

Helix unwinds, one section at a time, catalyzed by helicase

Each exposed nucleotide is paired with a complementary nucleotide, catalyzed by the DNA polymerase

End result is each of the original DNA strands is joined with a newly formed complementary daughter DNA strand

72
Q

RNA

A

Single strand of nucleotides

Contains uracil instead of thymine so adenine pairs with uracil

Messenger RNA (mRNA)
    -Directs the synthesis of a protein
Ribosomal RNA (rRNA)
    -Joins with proteins to make ribosomes
Transfer RNA (tRNA)
    -Brings an amino acid to the ribosome so it can be incorporated into a protein
73
Q

Genetic Code

A

Genes code for RNA necessary to make proteins

Other substances (lipids, carbs) are made through reactions catalyzed by enzymes (proteins)

3 nucleotide sets store information in DNA/RNA

- DNA-base triplet
- mRNA-codon
- tRNA-anticodon
74
Q

Gene Expression

A

Involved transcription and translation

75
Q

Transcription

A

Transcription occurs in the nucleus and is the process by which genetic information encoded in DNA is copied onto a strand of RNA to direct protein synthesis

Catalyzed by the enzyme RNA polyerase

76
Q

Translation

A

Translation occurs in the cytoplasm and is the process of reading the mRNA nucleotide sequence to determine the amino acid sequence of the newly formed protein

Lags subunit has 3 binding sites for tRNA

- Exit
- Protein
- Amino acid
77
Q

Cell Division

A

Cell division is a process by which cells reproduce themselves

78
Q

Interphase

A

G1 phase
-Duplication of most organelles and cytosolic contents

S phase
-Replication DNA centrosomes

G2 phase
-Cell growth, enzyme/protein synthesis continues

79
Q

Mitotic Phase: Prophase

A

During prophase chromatin condensed into chromosomes, nuclear envelope/nucleoli disappear and the mitotic spindle forms

80
Q

Mitotic Phase: Metaphase

A

During metaphase centromeres of chromosomes line up at the metaphase plate

81
Q

Mitotic Phase: Anaphase

A

During anaphase centromeres of chromosomes split and sister chromatids move toward opposite poles of the cell

82
Q

Mitotic Phase: Telophase

A

During telophase, the mitotic spindle dissolves, chromosomes regain their chromatin appearance, and a new nuclear membrane forms

83
Q

Cytokinesis

A

During cytokinesis a cleavage furrow forms and eventually the cytoplasm of the parent cell fully splits
-When this is complete, interphase begins

84
Q

Control of Cell Destiny

A

3 possible destinies

  1. Remain alive and function without dividing
  2. Grow and divide
  3. Die
85
Q

Metabolic Reactions

A

Metabolism refers to all of the chemical reactions taking place in the body

Reactions that break down complex molecules into simpler ones are catabolic (decomposition)
-Energy is released, converted to ATP

Reactions that combine simple molecules to make complex molecules are anabolic (synthesis)
-Energy is required, comes from ATP

86
Q

Energy Transfer

A

Convert the chemical energy of food to molecules of ATP

All molecules have energy stored in their bonds

ATP is the storage form of energy in cells

Glucose is the body’s preferred source of synthesizing ATP

The oxidation of glucose to produce ATP is called cellular respiration

Oxidation-Reduction reactions are one category of reactions important in energy transfer

Oxidation involves the removal of electrons (in the form of H atoms) from a molecule. This results in a decrease in energy content of the molecule.

Reduction involves the addition of electrons (in the form of H atoms) to a molecule. This results in an increase in energy contents of the molecule

When a molecule is oxidized, the liberated hydrogen atoms are transferred to coenzymes

These are nicotinamide adenine dinucleotide (NAD) and flavin adenine dinucleotide (FAD).

These coenzymes will eventually donate the electrons to the final stage of cellular respiration called the electron transport chain

Oxidation and reduction are always coupled. That is why the two reactions together are called oxidation-reduction or redox reactions.

87
Q

Cellular Respiration

A

Will generate either 30 or 32 ATP molecules for each molecule of glucose catabolized

2 produced in glycolysis

2 produced in Krebs cycle

26-28 produced in ETC

Glucose + Oxygen –> carbon dioxide + water + energy (ATP)

88
Q

Carbohydrate Metabolism

A

The oxidation of glucose to produce ATP is cellular respiration. Four sets of reactions are involved

- Glycolysis
- Formation of acetyl coenzyme A (Acetyl CoA)
- Krebs cycle
- Electron transport chain (ETC)
89
Q

Glycolysis

A

The process whereby a 6-carbon glucose molecule is split into two 3-carbon molecules of pyruvic acid

Occurs in the cytoplasm

Involves 10 reactions

Required the input of 2 ATP, but produces 4 ATP therefore 2 net ATP

2 NADH are produced that will enter the ETC

Doesn’t require oxygen and is called anaerobic cellular respiration

90
Q

Acetyl Coenzyme A

A

What happens to the pyruvic acid depends on the availability of oxygen

If oxygen is scarce (anaerobic conditions) pyruvic acid is reduced by the addition of 2 hydrogen atoms to form lactic acid

If oxygen is plentiful (aerobic conditions), most cells convert pyruvic acid to acetyl coenzyme A in the mitochondrial matrix

The formation of 2 acetyl CoA from the 2 pyruvic acid results in 2 CO2 (exhaled) and 2 NADH (enter ETC)

Acetyl CoA is called the fuel for the Krebs cycle

91
Q

Krebs Cycle

A

Also known as the Citric acid cycle

Occurs in the matrix of mitochondria and consists of eight reactions

Various organic acids in the cycle get oxidized as the coenzymes get reduced

As a result of the 2 Acetyl CoA entering the cycle 4 CO2, 6 NADH, 2 FADH2, and 2 ATP are produced

92
Q

Electron Transport Chain

A

A series of electron carriers in the inner mitochondrial membrane

The reduced coenzymes donate their electrons to them

Each carrier in the chain has more affinity for the electrons and is reduced as it picks up electrons and oxidized as it gives up electrons

Oxygen is the final electron acceptor

As the electrons are passed along the chain there is a stepwise release of energy

- Some is released as heat
- Some is used by the carriers to pump H+ into the intermembrane space

Get a high concentration of H+ in the intermembrane space creating a gradient back across the membrane to the matrix

ATP synthesis occurs as H+ diffuses back to the matrix through a H+ channel in the membrane enzyme ATP synthase

93
Q

Lipid Metabolism

A

Energy yield from lipids is 2x that from glucose or amino acids

Glycerol is converted to an intermediary in glycolysis and FA is converted to acetyl CoA

94
Q

Protein Metabolism

A

First step in using amino acids to make ATP is removal of the amino group in a process called deamination in liver cells

Ammonia is produced which is highly toxic so it is converted to urea which is relatively harmless and excreted in urine

Rest of amino acid is converted into molecules that are part of the Krebs cycle or Acetyl CoA

95
Q

Anatomy vs. Physiology

A

Anatomy is the study of structure

Physiology is the study of how body structures function