T cells Flashcards
Where do thymocytes mature
Thymus
- thymocytes mature into Th & CTLs
Thymic education
thymocytes to naive T cells
- eliminated T cells that could potentially attack our own cells/tissues aka self-antigens
Cells involved in antigen presentation to maturing thymocytes
- IDCs
- Thymic medullary epi cells (mTECs)
- cortical epi cells
- macrophages
- cells present self antigens to thymocytes - forbidden food - if thymocytes bite -> killed via apoptosis
Where are thymocytes derived from
Lymphoid stem cells
- mature cells
- +/- selected in cortex/medulla
- 99% have αβTCR
- remainder have γδTCR
Maturation stages of thymocytes
Stage I
- βTCR chain rearranges (CD3 in cytoplasm)
- double -ve
(CD4-, CD8-)
Stage II
- 80% of thymocytes
- Double +
(CD1+, CD4+, CD8+)
- alpha chain rearranges
- low density surface expression
Stage III
- matured thymocytes
(CD1-)
- single +
(CD4+ or CD8+)
- high density surface expression of αβTCR on cell
CD1 function
Keeps thymocytes in thymus
positive selection
tests for dual recognition of
- functional TCR on T cell surface
- recognises MHC molecules on APC surface
*has both T cell and TCR made -> can interact with MHC
negative selection
deletion of self-reacting T cells/thymocytes
- if TCR recognises self antigens -> thymocyte killed by APCs (apoptosis)
- apoptotic bodies removed by phagocytes (mainly macrophages)
thymic nurse cell
supports thymocyte proliferation by producing IL-7
*haemopoietic growth factor
Single positive thymocyte fate
Leave thymus and become naive effector T cells (Teff)
*both CD8 and CD4
How many thymocytes make it through education process
Only 1-2%
Where is AIRE expressed
mTecs
How can small set of APCs in thymus present ALL self antigens expressed in the body?
Aire (TF expressed in thymic medullary epi cells)
- promotes expression of 1000s TSAs
mTECs
- each mTEC express a TSA gene
- co-expression of other genes
- genes clustered at a particular location on chromosome
-> increased chromatin accessibility
*broad range of self TSAs being displayed to T cells by diverse pool of mTECs
mTEC expression in peripheral tissues
magnitude lower
Additional proteins that assist AIRE
**release stalled RNA polymerase **
- allow RNA elongation
- regulates AIRE itself
Gene silencing
induced by the repressed chromatin structure
- marked by the loss of methylation at histone H3 lysine 4 (hypomethlation)
H3K4
- unmethylated H3 lysine 4
- repressive epigenetic marker
- recognised by AIRE
How is AIRE different to other TFs?
- **no clear **DNA binding motif
- recognises genes that possess silenced/repressed chromatin states
Aging and thymus
- largest at birth
- most active up until puberty
- after this point it begins to involute and turn to fatty tissue
- active thymic tissue with DP thymocytes reduces after age 40
Thymic atrophy
associated with the loss of thymic TECs -> thymopoiesis
*process by which thymocytes turn into mature T cells
Factors that are reduced with age in TECs
- IL-7
- MHC II
- FoxN1
*thymocyte promoting factors
FoxN1
expression of this TF in TECs decrease with age
-> causes rapid depletion of TECs