Stereochemistry Flashcards

1
Q

What are isomers?

A

Molecules with the same molecular formula but a different shape

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2
Q

What are stereoisomers?

A

Molecules with the same molecular formula but a different arrangement of atoms in space

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3
Q

What is sp2 hybridisation?

A

Where the s and p orbitals in a molecule overlap to form 3 combined sp2 orbitals and a half filled p orbital, this enables a C=C bond to be formed, the half filled p orbital combines with a half filled p orbital from the other carbon to form the pi bond that is above and below the molecule

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4
Q

How do you determine the priority of a group that is attached to a carbon atom?

A

The atom that is attached to the carbon that has the highest atomic mass, if the first atom attached is the same then you look at the next atom attached and see which has the highest atomic mass

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5
Q

How do you determine whether a molecule is an E or Z isomer?

A

You determine which is the highest priority group on each of the carbons, circle each one. If these are on the same side of the double bond then its a Z (cis) isomer, if they’re on opposite sides then it’s an E (trans) isomer

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6
Q

When isotopes of the same element are attached to the same carbon, which isotope is higher priority?

A

The isotope with the larger atomic mass

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7
Q

How can sp3 carbon atoms give stereoisomers?

A

4 different groups must be attached to the central carbon atom, the two stereoisomers will be non superimposable mirror images of each other

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8
Q

How do you determine whether enantiomers are R or S?

A
  • The lowest priority group must be drawn at the back of the molecule
  • Ensure that the molecule that you have drawn with the lowest priority group drawn at the back has the other groups arranged in the same order as the original drawing
  • Assign priority to the other groups with 1 being the highest
  • If the groups are 1,2,3 clockwise its an R enantiomer
  • If the groups are 1,2,3 anticlockwise its an S enantiomer
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9
Q

How is optical activity measured?

A
  • Normal light is passed through a polariser
  • Plane-polarised light that only vibrates in one plane is passed through a solution of the enantiomer
  • The enantiomer will either rotate the light clockwise or anticlockwise
  • A polarimeter is used to measure the optical activity
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10
Q

What is specific rotation?

A
  • Specific rotation = Observed rotation ( ° ) / concentration (g/ml) x path length (dm)
  • [ α ] = α / c x l
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11
Q

What is the specific rotation of a racemic mixture?

A

0

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12
Q

How is a racemic mixture formed?

A

A racemic mixture is formed when a chiral compound is formed from an achiral starting molecule, both enantiomers are formed in equal amounts

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13
Q

How do you calculate the amount of stereoisomers a compound will have based on how many chiral centres it has?

A

2^n , n= no. of chiral centres

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14
Q

What is a diastereoisomer?

A

Stereoisomers that are not enantiomers

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15
Q

What are meso-isomers?

A

Where the mirror image of the molecule is identical to the original molecule, this means a meso-isomer is a form of a diastereoisomer and they only occur when the original molecule has 2 identical chiral centres

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16
Q

What is a staggered isomer?

A

An isomer with 2 chiral centres that when you look down the C-C central bond, you can see the hydrogens on the back carbon
- Hydrogen atoms on adjacent carbons are as far away from each other as possible

17
Q

What is an eclipsed isomer?

A
  • An isomer with 2 chiral centres that when you look down the C-C central bond you can’t see the hydrogens on the back carbon as the hydrogens on the front carbon eclipse them
  • Hydrogen atoms on adjacent carbons are as close together as possible
18
Q

What is the angle of torsion for a staggered isomer?

A

60°, 180°

19
Q

What is the angle of torsion for an eclipsed isomer?

A

0°, 120°

20
Q

When drawing a Newman projection for butane what is the name of the eclipsed isomer with an angle of 0° between the two CH3 groups?

A

Synperiplanar

21
Q

When drawing a Newman projection for butane what is the name of the staggered isomer with an angle of 60° between the two CH3 groups?

A

Synclinical

22
Q

When drawing a Newman projection for butane what is the name of the eclipsed isomer with an angle of 120° between the two CH3 groups?

A

Anticlinical

23
Q

When drawing a Newman projection for butane what is the name of the staggered isomer with an angle of 180° between the two CH3 groups?

A

Antiperiplanar

24
Q

Which isomer of butane has the lowest energy?

A

Antiperiplanar as the CH3 groups are furthest away and therefore have the least repulsion so the antiperiplanar isomer is the most stable

25
Q

Which isomer of butane has the highest energy?

A

Synperiplanar as the CH3 groups are closest together and therefore have the most repulsion

26
Q

Do staggered or eclipsed isomers have a higher energy?

A

Eclipsed as the C-H bonds are closest together and the electrons in these bonds repel each other meaning that eclipsed isomers have a higher energy

27
Q

What is torsional strain?

A

The energy difference between staggered and eclipsed isomers, it is approximately 12kJmol-1 in ethane and approximately 21kJmol-1 in butane

28
Q

What happens when the energy barrier to rotation increases above 80kJmol-1?

A

The molecule can’t rotate about that bond at room temperature anymore, this enables you to separate conformers

29
Q

What is an atropisomer?

A

Enantiomers without chiral centres, this is possible as the energy barrier to rotation of a bond is too large so the molecule can’t rotate about that bond and therefore you can have enantiomers of this molecule

30
Q

Why isn’t cyclobutane a planar molecule?

A

If cyclobutane was planar, there would be eight pairs of eclipsing C-H bonds from the 4 carbons, this causes a large amount of torsional strain. Instead one of the carbon atoms moves out of the plane and the molecule adopts a butterfly conformation

31
Q

What happens to the angle strain of cyclobutane in the butterfly conformation?

A

The angle strain is increased as the bond angle decreases from 90° to 88°, however the torsional strain decreases massively and therefore the butterfly conformation is far more stable

32
Q

Does the boat or chair conformation of cyclohexane have a higher energy?

A
  • The boat conformation has a higher energy as it has steric crowding of the two hydrogens at the top of the boat, it also has an eclipsing strain from the two parallel bonds in the diagram
  • The chair conformation has a small steric strain, no angle strain and no eclipsing strain. This causes it to be 30kJmol-1 more stable
33
Q

When cyclohexane has a substituent group attached, which position of the substituent makes cyclohexane more stable?

A

When the substituent is in the equatorial plane the chair conformer is more stable as there is less torsional strain due to the substituent not being close enough to interact with the hydrogens on carbons 3 and 5. This means that cyclohexane has a lower energy when substituent is in equatorial position

34
Q

What is the other name for eclipsing strain?

A

Torsional strain

35
Q

What happens to the position of equilibrium between the substituent being in the axial or equatorial position as the substituent gets larger?

A

The equilibrium shifts towards the substituent being in the equatorial position as the larger the substituent is he closer it is to the hydrogens on carbons 3 and 5 and therefore the diaxial interactions are stronger and therefore the molecule has more energy and is less stable. This means that the molecule mainly exists with the substituent in the equatorial plane.

36
Q

Is it more stable to have substituents in the equatorial or axial position?

A

Equatorial as the substituents can’t interact with each other when in equatorial position