Stem Cells Flashcards

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1
Q

What is the definition of a stem cell?

A

A stem cell is a cell that has retained its capacity to self renew. It is a single cell that can replicate itself, or differentiate into many cell types.

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2
Q

Name the two types of stem cells

A
  1. Embryonic Stem cells

2. Adult stem cells (Somatic stem cells)

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3
Q

What do embryonic stem cells differentiate into?

A

Can differentiate into almost any cell type in the body.

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4
Q

What can somatic stem cells differentiate into?

A

Somatic stem cells reside in specific tissues and can differentiate into a subset of related cell types.

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5
Q

What does pluripotent mean?

A

Condition to be able to generate all different cell types for an adult body.

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6
Q

What does multipotent mean?

A

Multipotent is used to describe a stem cell that can make multiple different cell types but NOT ALL.

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7
Q

Describe the steps for isolating ES (embryonic stem cells)?

A
  1. Sperm and egg join
  2. Embryo develops for 5-7 days
  3. Remove inner cell mass from blastocyst
  4. Grow in Petri dish
  5. Change culture conditions to stimulate cells to differentiate into a variety of cell types such as skeletal muscle cells, skin cells or neural cells.
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8
Q

What does homologous mean?

A

Similar in position structure and evolutionary origin but not necessarily in function.

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9
Q

Describe Steps 1 and 2 for gene targeting in ES cells.

A
1. ES cell culture
Embryonic stem (ES) cells are cultivated from mouse pre-implantation embryos- blastocysts.
2. Construction of targeting vector: the vector contains pieces of DNA that are homologous to target gene, as well as inserted DNA which changes the target gene and allows for positive/negative selection.
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10
Q

Describe how neo resistance works in construction of a target vector, in regards to positive/negative selection…

A

Within the homologous DNA we’re using as vector, we’ve constructed neo resistance, this confers resistance to an antibiotic type drug, so any cell expressing neo^r gene will be resistant to this antibiotic. This gives the possibility to positively select for cells that have taken up this DNA.

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11
Q

What does transfection mean?

A

It’s a process by which we introduce new genetic material to cells.

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12
Q

What is HSV-tv used for?

A

Negative selection

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13
Q

Describe step 3 in gene targeting in ES cells

A

The cellular machinery for homologous recombination allows the targeting vector to find and recombine with the target gene. The neomycin cassette in middle will loop out to allow this alignment. Due to high level of homologous recombination in mice ES cells recombination events will happen in some cells which will replace the original target sequence with the new sequence which now carries neo^r gene.

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14
Q

Describe how HSV-tk selection works…

A

HSV-tk carries a means of making cells susceptible to a certain treatment which kills them, cells that have made a poor alignment therefore die as they carry this, HSV to not included in cells with a good alignment.

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15
Q

Describe step 4 for Gene targeting in ES cells

A

Proliferation of targeted ES cells: selection for presence of neo^r and absence if HSV-tk enriches targeted ES cells- get a pure population of ES cells carrying targeted gene.

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16
Q

Describe step 5 of gene targeting in mice…

A
  1. Injection of ES cells into blastocysts
    The targeted ES cells are injected into blastocysts, where they mix and form a mosaic with the cells from the inner cell mass from which the embryo develops.
    The injected blastocysts are implanted into a surrogate mother where they develop into mosaic embryos.
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17
Q

Describe step 6 for gene targeting in mice

A
6. Birth and breeding of mosaic mice
Mosaic mice (chimeric mice) are born and are mated with normal mice to produce both gene targeted and normal offspring.
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18
Q

Gene targeted mice are also called what?

A

Knockout mice

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19
Q

How many generations would it take to get a stable line of genetically altered mice?

A

2, the 2nd generation would produce homozygous knockouts.

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20
Q

Define Induced Pluripotent stem cells(iPS)

A

iPS are a type of pluripotent stem cells derived from adult somatic cells that have been genetically reprogrammed to an embryonic stem cell like state through the forced expression of genes and factors important for maintaining the defining properties of ES cells.

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21
Q

What do ES cells have that regulate the stem cells and what are the core ones called?

A

A set of transcription factors and the core TF’s that maintain the ES cell state are called OSKM’s

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22
Q

What does OSKM stand for/mean?

A

They are the master gene regulator proteins- Oct4, SOX2 and KLF4 (OSK) and Myc

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23
Q

What do OSK do?

A

OSK induce both their own and each other synthesis!

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24
Q

Why are iPS cells a promising source of cells for treating diseases?

A

They can be made from patients own cells so there is no risk of rejection.

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25
Q

What’s a concern for IPS cells?

A

The safety is uncertain due to the genetic modification that has been created.

26
Q

What does OSK to Nanog lead to?

A

Upregulation of embryonic stem cell genes and Dow regulation of differentiation genes.

27
Q

What does Myc lead to?

A

Up regulation of cell proliferation and loosening of chromatin structure (which helps with genetic manipulation)

28
Q

Describe the steps to creating iPS cells..

A
  1. Isolate cells from patient (skin or fibroblasts) and grow in a dish
  2. Treat cells with reprogramming factors- OSKM
  3. Wait a few weeks
  4. Now have pluripotent stem cells
  5. Change culture conditions to stimulate cells to differentiate into a variety of cell types.
29
Q

Draw out the experimental strategy to select iPS cells

A
30
Q

What do you add to produce an adipocyte from iPS cells?

A

Retinoic acid + insulin and thyroid hormone.

31
Q

What do you add to produce a neutron from iPS cell?

A

Retinoic acid

32
Q

What do you add to produce a macrophage from an iPS cell?

A

Macrophage colony stimulating factor + interleukin 3 and 1

33
Q

What do you add to produce a smooth muscle cell from a iPS cell?

A

dibutyryl cAMP + Retinoic acid

34
Q

What do you add to produce astrocytes and oligodendrocytes from iPS cells?

A

Fibroblast growth factor + fibroblast growth factor 2, epidermal growth factor + fibroblast growth factor 2, platelet derived growth factor

35
Q

What are somatic cells important for?

A

Important for growth, healing and replacing cells lost through wear and tear.

36
Q

What stem cells are used to treat disease?

A

Blood and bone marrow stem cells.

37
Q

Are somatic cells pluripotent or multipotent?

A

Multipotent

38
Q

Name two well characterised adult stem cell types?

A

Stem cells in epithelia of small intestine

Haematopoietic stem cells

39
Q

Describe the renewal of the gut lining

A

Epithelial cell migration from “birth” at bottom of the crypt (invaginations) to loss at the top of the villus (transit time 3-5 days)

40
Q

Does cell division happen at the villus?

A

No!

41
Q

Describe structure of the crypt

A

There are non dividing differentiated paneth cells and stem cells at bottom of crypt.
The stem cells divide every 24hrs.
Transit amplifying cells (rapidly dividing cells) lie in middle section of crypt, their cycle time is 12 hrs. Progeny are pushed upwards away from the base of the crypt towards the apex of villus. Non dividing differentiated cells lie at top of villus and are sloughed off.

42
Q

What are the types of differentiated cells in the small intestine?

A

Absorptive cell, goblet cell, Paneth cell, enteroendocrine cell.

43
Q

What does the absorptive cell do?

A

Take up nutrients from the gut lumen.

44
Q

What does a goblet cell do?

A

Secretes protective coat of mucus (acts as lubricant)

45
Q

Do do Paneth cells do?

A

Secrete proteins to kill bacteria

46
Q

What do enteroendocrine cells do?

A

Secrete serotonin and peptide hormones to regulate growth, proliferation and digestive activities of other cells.

47
Q

What choice do the daughters of a stem cell face?

A

Self renewal or terminal differentiation

48
Q

What are the two theoretical ways for a stem cell to produce daughters with different fates?

A
  1. Asymmetric division

2. Independent choice

49
Q

Explain asymmetric division…

A

Asymmetric division involves the stem cell containing a localised determinant (determinant for self renewal or differentiation) meaning the choice is determined by asymmetry in the dividing stem cell. The side which has this localised determinant will always self renew and the other side will differentiate (or vide versa).

50
Q

Explain independent choice in dividing stem cells…

A

Independent choice is a random decision, it is a choice determined stochastically or by environment which help determine cell fate.

51
Q

What is the stem cell niche?

A

A stem cell niche is only large enough to occupy one stem cell so randomly one of the daughters would be extruded from the niche, the one that remains becomes a new stem cell and the other one that is extruded differentiates.

52
Q

Describe the stem cell niche in Paneth cells…

A

There is room for about 15 Lgr-15 positive stem cells in base of each crypt, the surrounding non differentiating Paneth cells generate signals and activate the signalling pathway in stem cells ( Wnt + Notch). When a stem cell divides to create 2 new stem cells there is not room for both so one is randomly pushed out to begin differentiation.

53
Q

What does the Wnt signalling pathway do?

A

Maintains cell proliferation

54
Q

What does the Notch signalling pathway do?

A

Inhibits differentiation

55
Q

How is the choice made between self renewal and differentiation?

A

Choice is made by random and/or by environment (niche)

56
Q

Is each type of differentiated cell produced by a single type of stem cell?

A

Yes, a single stem cell can give rise to all 4 differentiated cell types.

57
Q

What keeps the stem cell in place and maintains its stem cell character?

A

Paneth cells induce Wnt and notch signalling in stem cells to maintain their character.

58
Q

What do haemopoeitic stem cells make?

A

All types of blood cells

59
Q

What do haemopoetic stem cells depend on ?

A

Contact with stromal cells (their niche) although this is not absolute as there are functional stem cells that can be found free in the circulation. Once differentiated no need for contact.

60
Q

Why do cancer stem cell complicate cancer treatment?

A

Radiotherapy or chemotherapy often kill the fast growing transit amplifying cells sparing the slow growing stem cells, which can then go on to resurrect the disease.