Spectroscopy Flashcards

1
Q

Says that the energy of electrons in atoms and molecules are quantized in specific allowed energy levels

A

quantum theory

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2
Q

Electrons, ___ or ___ are excited to higher electronic states by __ or ____ and then give off ___ as the electrons relax back from higher energy states to lower energy states. The difference between two of these allowed energy levels can be measured when a system ___ or ___ these photons of electromagnetic radiation

A

atoms, ions, heat, light, photons, absorbs, emits

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3
Q

Light consists of packets of photons of various wavelengths that have no ___, are ____ ___, have a ___ field, and have an ___ field

A

mass, pure energy, magnetic, electric

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4
Q

The electrons generate a magnetic field because it ___ and carries a ___. When there is an external magnetic field, the electron can orient its spin __ or ___ that field

A

spins, charge, with, against

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5
Q

All molecules have a series of _____ modes whose motion and hence __ are quantized. Complicated molecules may vibrate in a number of different ____. Vibrations can be excited by the absorption of electromagnetic radiation in the ____ region.

A

vibrational, energies, modes, IR

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6
Q

Typical energies for vibrational excitation are _____and the frequency of radiation absorbed should be ____

A

10E-20 - 10E-10, 10E13-10E14

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7
Q

The __ ___ ___ says that the electric dipole moment of the molecule must change during the vibration. ___ ____ are IR inactive since there can be no dipole moment change during their one and only __ ___, thus their vibrations do not absorb of generate radiation. ___ ___ will be IR active

A

gross selection rule, homonuclear diatomics, stretch mode, heteronuclear diatomics

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8
Q

The __ ___ __ ___ states that the change in vibrational energy between two states is always equal to ___. in other words, it vibrates one ___ higher when the photons have just the right amount of energy and the molecule absorbs ____

A

quantum mechanical selection rule, +1, unit, light

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9
Q

At room temperature, almost all molecules will be in their vibrational ___ ___, so the main spectral transition upon photon absorption will be from ___ to _____

A

ground state, v=1, v=0

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10
Q

For a molecule of N atoms, there are ____ vibrational. modes for polyatomic molecules and ____ modes for linear polyatomic molecules

A

3N-6, 3N-5

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11
Q

In an IR spectrum various absorption peaks correspond to the __, ___, ___ and ___ vibrational modes.

A

stretching, bending, rocking, wagging

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12
Q

Vibrations that don’t involve ____ have lower energy transitions and are found in the region below _____cm^-1. This region is called the __ ___ because it contains many distinctive peaks that can be used to identify ____, and contains all possible _____ vibrations of a molecule

A

stretching, 1500, fingerprint region, unknowns, bending

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13
Q

IR spectroscopy is used for the identification of __ ___ before NMR was invented, __ __ determination in organic and inorganic synthesis, in __ ___ where molecules are in the gas phase, in physical chemistry for determining __ ____, and for detecting very ___ amounts of material

A

molecular structure, functional group, atmospheric spectroscopy, bond strengths, small

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14
Q

Are _____cm^1 peak in an IR spectrum is indicative of a benzene ring

A

900-600

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15
Q

In UV/VIS spectroscopy, ___ are excited usually from a -__ or ____ molecular orbital to a nearby empty _______ orbital. The most probable electronic transitions occur from ___ to the ____.

A

electrons, bonding, nonbonding, antibonding, HOMO, LUMO

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16
Q

The photon energy wavelengths for the UV region is _____, and ___ for the VIS region

A

200-400, 400-700

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17
Q

The colour that we see are the photon frequencies that are ___ ___

A

not absorbed

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18
Q

The intensity of absorption is given by the __ __ ___

A

beer lambert law

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19
Q

UV/Vis show more _____ absorption bands compared to IR spectra. This is because electronic excitation happens much ___ than vibrations of atoms in the molecule. In a ___ transitions can be distinguished and show up as distinct absorption lines, while in liquids and solids, the transitions are mixed up, making it harder to distinguish ___ ____.

A

broad, faster, gas, individual vibrations

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20
Q

The ____ ____ ____says that faster transitions mean that nuclei do not respond fast enough for its ___ to change (in contrast to IR transitions where the geometry does change)

A

franck-condon principle, geometry

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21
Q

Most ___ ___ do not have colour. Organic molecules with ___ __ __ absorb light in the UV region. When conjugated double bonds form ___ or longer chains, the difference between the energy level of the HOMO and LUMO decreases. This results in the energy needed for electron transitions to ___, resulting in ___ wavelengths of absorbed light. This results in a switch from the UV to the ___ spectrum, making the molecule appear coloured

A

organic molecules, conjugated double bonds, 8+ , decrease, longer, vis

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22
Q

UV/VIS spectroscopy is used in ___ _____ __ ___ to examine the separated fractions of a mixture

A

high performance liquid chromatography

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23
Q

The part of the molecule that gives rise to the UV.VIS electronic absorption

A

chromophore

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24
Q

In organic chemistry, C-C ____ ____ and extended _____ series of double bonds, ____ ____, isolated ___ groups, and
carbonyls conjugated to extended ____ _____ are the chromophore. In inorganic chemistry, many coloured metal complexes occur for transition metals such as ___, ___, ___ and ___, due to electronic absorption by valence shell ___ electrons into LUMOS

A

double bonds, conjugated, phenyl rings, carbonyl, pi systems, Ni2+, Fe3+, Cu2+, Ti3+, d

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25
Q

Electronic transitions are usually referred to as

A

N to pi, N to sigma, Pi to pi, or sigma to sigma

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26
Q

When the UV spectrum is measured for a compound in the ___ phase, ____ fine structure can often be seen in electronic transition bands. Vibrational modes can slightly alter the ___ associated with electronic transitions. If the spectrum is measured in a solution, interaction with the ___ usually broadens the absorption peaks so a less detailed spectrum is obtained.

A

gas, vibrational, energies, solvent

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27
Q

___ bonds are very strong and electronic transitions from occupied sigma orbitals are very ___ ___ and not normally seen in the UV region. They can be measured by ___ ____.

A

sigma, high energy, x-ray spectroscopy

28
Q

Pi bonds are ___ and transitions from occupied pi orbitals require energies that fall in the UV region. Thus, if a molecule absorbs in the UV/VIS region, there must be __ ___ present. ____ stabilizes the excited state more than the __ ___. The more conjugated double bonds there are, the lower the energy of the transition, and the ___ the wavelength of absorption.

A

weaker, double bonds, conjugation, ground state, longer

29
Q

For aliphatic compounds absorption begins in the ___ region when there are ____ conjugated double bonds.

A

visible, 7

30
Q

The red colour of blood is due to the highly conjugated ___ molecules of ____. ___ vs ____ vs _____ ___ poisoned blood have different UV/VIS spectroscopy

A

heme, hemoglobin, oxygenated, deoxygenaetd, carbon monoxide

31
Q

In mass spectrometry, a substance is bombarded with an __ ___ that has sufficient energy to remove an electron from the molecule. The positively charged molecules that are produced, the __ ____ are ___ in a vacuum through a ___ ___ and are sorted on the basis of mass-to-charge ratio. Most ions produced into the mass spectrometer carry one positive charge, so the mass-to-charge ratio value is equal to their __ ___.

A

electron beam, radical cations, accelerated, magnetic field, molecular weight

32
Q

The magnetic field will ___ the path of the charged molecules. The low or high mass ions are ____ and collide with an analyzer wall. Ions that are just the right charge-to-mass ratio follow the path of the analyzer and exit through the ___, colliding with the ___, which generates an electric current. This current is ___ and detected.

A

bend, deflected, slit, collector, amplified

33
Q

By varying the strength of the __ __ the mass-to-charge ratio which is analyzed can be continuously varied.

A

external field

34
Q

The most intense peak in a mass spectrum and the one that all others are reported relative to

A

base peak

35
Q

The highest molecular weight peak will typically represent the __ __ minus an _____

A

parent molecule, electron

36
Q

Small peaks observed above the calculated molecular weight are due to the ___ __ ___ of 13C, 2H, etc. __, ___, ___ and __ are the predominant isotopes, but some elements have two common isotopes. Elements with two common isotopes will have peak intensities that depend on the relative ___ of isotopes.

A

natural isotope abundance, 12C, 1H, 14N, 16O, abundance

37
Q

Elements with ___ protons like alcohols or amines, can exhibit peaks at ___ or _____ instead of a molecular ion peak due to the loss or acquisition of ___ during ionization

A

labile, M-1, M+1, protons

38
Q

Fragmentation occurs because of ___ ___in the charged molecule which breaks it apart into smaller fragments by breaking the ___ bonds in the molecule. The fragments that form are the most ___ charged species that a molecule can form. When a bond breaks in a radical cation, one fragment is ____, and the other keeps the original charge. Only the ___ fragment will generate a signal in the mass spectrum.

A

excess energy, weakest, stable, neutral, charged

39
Q

If a molecule contains atoms with lone pairs of electrons, common for elements like __, ___, ___, ___, -__ and ____, or a structure that has excess electrons such as ___ __ or ___ ___, the radical cation splits at a bond adjacent to it. If there is no clear preference for one fragment to retain the charge, both fragment ions will be formed ___. Some fragmentation processes depend on the ability of molecule to assume __ __ ___

A

Br, O, N, Cl, S, P, aromatic rings, double bonds, statistically, cyclic transition states

40
Q

An alkane molecular ion is relatively ___. the mass spec will show a series of ions corresponding to the loss of ___ groups. If it is branched it will show the same series but ions resulting from cleavage at the ____.

A

unstable, alkyl, branch

41
Q

Alcohols have a weak molecular ion due to the loss of ____ and a loss of a ___ group. Thiols show a strong molecular ion because the loss of ___ is not as easy as the loss of water from alcohols. ___ show weak molecular ions because cleavage to form the +CH2NH2 ion is easy as positive charge is stabilized by ___ with the non bonded electrons on the nitrogen.

A

water, methyl, H2S, amines, resonance

42
Q

___ compounds show a strong molecular ion, while carboxylic acids and esters show a loss of ___

A

aromatic, CO2

43
Q

Mass spectrometry can now analyze big and small molecules and is important in the analysis of ___ ____.

A

biological compounds

44
Q

Cleavage of straight chain carbons tend to happen at ___ points. Chain cleavage tends to occur at the second carbon from _____, __ ___ and __ ___. Cleavage also tends to occur at the carbon directly next to ____ groups to give stable __ ___. Cleavage may also occur right next to heteroatoms for example in the case of ___.

A

branch, heteroatoms, double bonds, aromatic rings, carbonyl, acylium cations, ethers

45
Q

The degree of unsaturation is the number of __ __ in a molecule. It is given by the formula _____, where C is the number of carbons, X is the number of halogens and hydrogens, and N is the number of nitrogens

A

double bonds, C+1 - 1/2(X-N)

46
Q

Any atomic nucleus that either has an odd __ __ or odd ___ __ has a quantized ___ ___ __ that is positively charged and thus has a magnetic moment associated with it. These nuclei behave as tiny magnets.

A

mass number, atomic number, spin angular momentum

47
Q

Common nuclei that possess spin: ___, ___, ____, ____, ___, ___ and ___

A

1H (1/2), 13C(1/2), 19F(1/2), 2H(1), 31P(1/2), 14N(1), and 17O(5/2)

48
Q

Common nuclei that are not magnetic are ___ and ___

A

12C, 16O (0)

49
Q

The NMR active nuclei can be in ___ possible quantized spin states, ml. 13C and 1H have only two possible spin states, ____ or ___.

A

2l+1, +1/2, -1/2

50
Q

the nucleus can spin with or __ the magnetic field. As the strength of the magnetic field increases, the difference in energy between the +1/2 and -1/2 spin states _____. Nuclear magnetic resonance occurs when this energy separation between the two spin states is matched by ___ of that electromagnetic radiation. When resonance absorption occurs, spins flip from _____ ___ __ state to __ __ ___ state and vice versa. NMR is the observation of the ____ at which magnetic nuclei in molecules come into resonance with an electromagnetic field

A

against, increases, photons, low energy alpha, high energy beta, frequency

51
Q

An NMR spectrometer is a magnet that can produce a uniform, ___ ___. The size of the magnetic determines the __ of the magnetic field. It has appropriate sources of ___ to induce resonance.

A

intense field, strength, radiofrequency

52
Q

in NMR nuclei align themselves either parallel or ___ to the external magnetic field. If a _____ is applied to the sample, it causes the aligned nuclear magnetic moments to ____ away from their original alignment. the rate at which the nuclear magnetic moments -__ around the axis of the external magnetic field is called the ___ ___ and is directly proportional to the strength of the external magnetic field and the -_ ____. In NMR we measure the absorption or emission of ____ ___ by nuclei as they undergo precession at larmor frequency.

A

antiparallel, radiofrequency, tilt, precess, larmor frequency, gyromagnetic ratio, radiofrequency energy

53
Q

__ ____ is when the resonant frequency varies due to the local magnetic fields felt at the ___. This is due to the circulation of ____ around or nearby the nucleus, which can either cause a _____ effect, as it reduces the effective magnetic field felt at the nucleus, or a ____ effect, which increases the effective magnetic field felt by the nucleus. Nuclei tend to be deshielded by groups which ____ electron density. This will cause different nuclei of the same element in a molecule to come into resonance at different ____.

A

chemical shift, nucleus, electrons, shielding, deshielding, withdraw, frequencies

54
Q

The reference compound, TMS, or ______, is a chemically ____ ___ who’s chemical shift is assigned 0. In this molecule, all protons have the same larmor frequency due to ___

A

(CH3)4I, unreactive liquid, symmetry

55
Q

____ ___ occurs due to the fact that each proton can be in two magnetic spin states, which interacts with another proton’s __ __, causing the resonance to split. The observed nucleus can sense the presence of other nuclei with magnetic moments and are either slightly ___ or ___ depending on which state the other nuclei are in. Nuclei that sense other nuclei in an ___ state will have slightly different energy to those which sense other nuclei in a __ state

A

spin-spin couplling, magnetic field, stabilized, destabilized, alpha, beta

56
Q

Coupling does not occur between different _____, and H-H coupling is generally unobservable across more than __ intervening bonds

A

molecules, 3

57
Q

The spin-spin coupling constant is the ___ __ in Hz between the peaks in each split. It is ___ to ___ Hz, and independent of the ___ ___. Thus it indicates structural information. Splitting tend to disappear and be concentrated into a tight ____ when all the chemical shifts are about the same

A

frequency distance, 20, < 0, magnetic field, multiplet

58
Q

The NMR signal of a nucleus coupled to N equivalent protons will be split into a multiplet with ___ lines

A

n+1

59
Q

_____, ___, ____, ___ and sometimes ___ are labile or ___ protons, that often have ___ resonances, and often do not have reliable characteristic chemical shift ranges. Labile protons exchange rapidly with each other and also with protons in ___ or with the deuterons in ____.

A

R-OH, R-NH, RCOOH, R-SH, R-CO-NH, exchangable, broadened, water, D2O

60
Q

13C spectroscopy is only ___ as sensitive as 1H to NMR as 13C is only ___% naturally abundant and has a low __ ____.

A

1/6000, 1.1, gyromagnetic constant

61
Q

There are no spin-spin splitting between adjacent 13C, but the ___ atoms attached to the 13C atoms are strongly coupled. The J for sp3 is ___Hz, sp2 is ____, and sp is ____

A

H, 125, 160, 250

62
Q

During ___ __, 1H is irradiated to ___ them from the 13C resonance. This improves the ____ ratio

A

broadband decoupling, decouple, signal/noise

63
Q

The number of resonances in the 13C NMR is the number of distinct ____ ___. If it is less than the number in the molecule, the molecule must have some ____.

A

13C environments, symmetry

64
Q

Chemical shifts in 13C NMR are ___ than 1H NMR due to the presence of shielding by ____ ___ ____, ie., non symmetrical electron clouds. Additionally the area under the singlets do not correspond to the number of carbons present in the molecule, thus there is no ____.

A

larger, non-spherical molecular orbitals, integration

65
Q

In MRI, a linear gradient field causes ___ to resonate at different frequencies at every point along an ____ which produce a profile of the water container with the signal intensity being proportional to the amount of water at each point along the __ ___. This allows imaging of ___ ____ which is 60-70% water in 3D

A

water, axes, gradient direction, soft tissue