Spectrophotometry Flashcards

1
Q

Spectrophotometry

A

Physical chemical investigation based on the properties of interaction between light and materials

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2
Q

Why is phosphate buffer good for biological reactions

A

Because of it’s high stability, buffering capacity and non-toxicity to most cells
pH 7.4 (which is required for cells) can easily be achieved with this buffer

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3
Q

Chromatography

A

Separation of mixture into individual components

The movement of molecules is determined by a molecule’s affinity for either phase

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4
Q

Stationary phase

A

A solid support that traps or retains molecules

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5
Q

Mobile phase

A

A buffer that flows on a stationary phase

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6
Q

Fick’s first law

A

J = - D (dy/dx)

Differential of concentration over concentration of space

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7
Q

What is another word for the

mobile phase?

A

Eluent

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8
Q

What can you call a mixture of buffer and solute or molecules exiting the stationary phase?

A

Eluate

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9
Q

What is an analyte?

A

A single molecule of a mixture

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10
Q

The average time it takes for a particular analyte to pass through the system is the ___ ___

A

Retention time

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11
Q

Which size molecules move faster in a sepharose gel column? Why?

A

Large
Smaller molecules enter the gel pores so they enter thre stationary phase and take a longer path down, entering and exiting through the gel beads.
Larger molecules are too large to enter the pores so they stay in the mobile phase and move down the column with the buffer.

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12
Q

Void volume

A

The volume of buffer that passes through the gel filtration column first and doesn’t contain any protein

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13
Q

Internal volume

A

The liquid within the pores of

the beads

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14
Q

What are the light ranges used in spectrophotometry?

A

UV: 185-400nm
Visible: 400-700nm
IR: 700-15000nm

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15
Q

?The rationale of spectrophotometry is to …

A

Measure interaction parameters (light intensity) to extrapolate chemical
information

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16
Q

Biological applications of spectrophotometry

A
  • Qualitative and quantitative investigations related to concentration of chemicals in solution
  • Measuring the levels of biologically relevant molecules in the blood
  • Measure of the concentration of protein, DNA or RNA in a solution
  • Assessing the growth of bacterial colonies
17
Q

’ /

A
18
Q

Standard solution

A

A solution with a known concentration of an element or substance. A known mass of solute is dissolved to make a specific volume

19
Q

The level of absorbance is proportional to the ___ of a compound in the solution

A

concentration

20
Q

A collimator is a…

A

Lens

21
Q

What does a monochromator do?

A

It seperates polychromatic light into a range of individual wavelengths and allows a narrow band of these wavelengths to be selected

22
Q

Equations

A
Transmittance= I/I°
Absorbance= log(I°/I)
23
Q

Transmittance ranges from…

A

0 to 1

24
Q

Absorbance ranges from…

A

[Infinity] > A > 0

25
Q

Beer-Lambert Law

A

A = ε . l . c

ε → molar extinction coefficient (L mol-1 cm-1)
l → path length (cm) This value is often 1
c → concentration(mol L-1)

These units cancel out so absorbance has no units

26
Q

260/280nm ratio is the…

A

Detection parameter of nucleic acids

27
Q

Coomassie (Bradford) is a…

A

Dye that can bind protiens. The colour change or increase in fluorescence can show changes in concentration of protein in a solution
-Coomassie blue G-250
-Polyphenol structure
-As a free molecule → cationic, mainly doubly protonated on ammines: red, absorbs at 470 mm
-Upon binding to proteins → transition to anionic form, deprotonated ammines: blue, absorbs at
595nm

28
Q

pH is defined by the concentration of ___ ions

A

H3O+

29
Q

Calculate the pH of 0.1mol 1000ml HCl in water

A
pH = -log10 [H+] 
pH = -log10 [0.1] = -(-1) = 1
30
Q

What is the formula for perchloric acid?

A

HCLO4

31
Q

What is HBr?

A

Hydrobromic acid

32
Q

How can you define a buffer?

A
  • A system that absorbs small variations of H+ or OH-
  • Acidic buffers have pH<7 and basic buffers have pH>7
  • Composed by weak acid/base and its conjugate salt
33
Q

the number

A