Social Behaviour in Microbes Flashcards

1
Q

Name some types of social behavior

A
  • Complex communication and decision making
  • Bullying - bacteria have been observed to bully each other
  • Cheating- microbes can be observed to take nutrients out of the system without doing any work
  • ### Helping others - ants making a bridge for other ants, themselves getting washed away.
  • ### Suicide
  • ### Aggression - microbes can show aggression, detect enemies
  • ### Families helping each other
  • Selfish gene -

Bacteria will help each other if they are the same family, but not if they are from different families

Book ‘selfish gene’ – much of biology is designed to protect the genetic makeup of a particular organism.

  • African Lion cubs
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2
Q

What is the difference between gram-negative and gram-positive bacteria?

A

Danish scientist Hans Christian Gram devised a method to differentiate two types of bacteria based on the structural differences in their cell walls. In his test, bacteria that retain the crystal violet dye do so because of a thick layer of peptidoglycan and are called Gram-positive bacteria. In contrast, Gram-negative bacteria do not retain the violet dye and are colored red or pink. Compared with Gram-positive bacteria, Gram-negative bacteria are more resistant against antibodies because of their impenetrable cell wall. These bacteria have a wide variety of applications ranging from medical treatment to industrial use and Swiss cheese production.

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3
Q

Talk about the evolution of social behavior

A
  • ##### These behaviours are not unique to man, or even to complex animals
  • ##### All can be observed in bacteria and even viruses (maybe not in viruses - Grant has not found any concrete examples.
  • ##### During evolution, the advantages of working together quickly became clear and led to a selective advantage
  • ##### Social networks began in bacteria
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4
Q

What are the benefits of forming a biofilm?

A

Motile cells settling forming a biofilm in the image.

Biofilm – example of group behavior in bacteria. One they have become attached to a surface they’ll differentiate and start producing matrix polymers (polysaccharides ect). Bind together and start working as a social group of organisms.

The function being protecting them with a big layer of cells, creating chemical buffering against changes in the PH in the main water body. Also producing a permanent more stable pH, and attracting more nutrients.

If the bacteria want to leave the biofilm they can disperse the biofilms with extracellular enzymes or other biological agents.

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5
Q

Give four concrete examples of predation and how social behavior in bacteria can lead to the absorption of nutrients through predation.

A
  1. Phagocytosis of a eukaryotic cell
  2. Cell invasion of prey by swimming Bdellovibro bacteriovorus cells. They burrow through the outer walls and secrete hydrolytic enzymes, obtaining energy for growth and division before lysing the prey cell host to complete the predatory cycle.
  3. Releasing of far-ranging antibiotic secondary metabolites by Streptomyces coelicolor (blue, filamentous cells) results in lysis of sensitive bacteria. The bacterium also secretes hydrolytic exoenzymes that could be involved in deriving a nutritional benefit from lysed neighbors.
  4. Predation by Myxacoccus xanthus (orange cells) utilizes enzymes and secondary metabolites are secreted, but the specific roles of each for this contract-based killing mechanism unknown.

Find another example from wider reading?

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6
Q

What similarities do social behaviours have between bacteria and animals?

A

Examples of convergent evolution.

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7
Q

What is Quorum sensing?

A

The discovery that bacteria are able to communicate with each other changed our general perception of many single, simple organisms inhabiting our world. Instead of language, bacteria use signalling molecules which are released into the environment. As well as releasing the signalling molecules, bacteria are also able to measure the number (concentration) of the molecules within a population. Nowadays we use the term ‘Quorum Sensing’ (QS) to describe the phenomenon whereby the accumulation of signalling molecules enable a single cell to sense the number of bacteria (cell density). In the natural environment, there are many different bacteria living together which use various classes of signalling molecules. As they employ different languages they cannot necessarily talk to all other bacteria. Today, several quorum sensing systems are intensively studied in various organisms such as marine bacteria and several pathogenic bacteria.

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8
Q

Why is quorum sensing important?

A

QS enables bacteria to co-ordinate their behavior. As environmental conditions often change rapidly, bacteria need to respond quickly in order to survive. These responses include adaptation to availability of nutrients, defense against other microorganisms which may compete for the same nutrients and the avoidance of toxic compounds potentially dangerous for the bacteria. It is very important for pathogenic bacteria during infection of a host (e.g. humans, other animals or plants) to co-ordinate their virulence in order to escape the immune response of the host in order to be able to establish a successful infection.

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9
Q

Give a gram-positive example of a bacteria that use quorum sensing from Grant.

A

Gram-positive bacteria
Peptides
Density-dependent

Eg Staphylococcus aureus

In staphylococci, the ability to sense the bacterial cell density, or quorum, and to respond with genetic adaptations is due to one main system, which is called accessory gene regulator (Agr). The extracellular signal of Agr is a post-translationally modified peptide containing a thiolactone structure. Under conditions of high cell density, Agr is responsible for the increased expression of many toxins and degradative exoenzymes, and decreased expression of several colonization factors. This regulation is important for the timing of virulence factor expression during infection and the development of acute disease, while low activity of Agr is associated with chronic staphylococcal infections, such as those involving biofilm formation. Accordingly, drugs inhibiting Agr are being evaluated for their capacity to control acute forms of S. aureus infection.

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10
Q

Give a gram-negative example of a bacteria that use quorum sensing from Grant.

A

Gram-negative - bacteria
Small molecules such as AHLs
Density-dependent
Many examples including Vibrio fischeri

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11
Q

What components does quorum sensing involve in gram-negative organisms?

A

Quorum sensing in gram-negative organisms involves two regulatory
components: the transcriptional activator protein (R protein) and the AI
molecule produced by the autoinducer synthase.

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12
Q

What molecule do bacteria sense when detecting the density of surrounding organisms?

A
  • Ammonia (Nijland et al Bacterial Olfaction)
  • Ammonia signalling induces biofilm formation
  • Bernier et al showed that ammonia also induces antibiotic resistance
    • Work into whether hospitals should let in more fresh air to reduce the antibiotic resistance of bacteria in hospitals.
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13
Q

Describe how the paper Bacterial Olfaction produced by one of Grants PHD students shows that bacteria can respond to ammonia in a similar manner of olfaction as higher organisms.

A

Bacillus licheniformis

On microtitre plates, the bacterium closest to another culture of bacteria produced a biofilm (pigmented pellicle).

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14
Q

What is the purpose of bacterial lactonase in plants?

A

Bacterial lactonase protects plants by breaking down the Bacillus enzyme, and breaking down AHLs

Transgenic tobacco and potato

INfected with Erwinia Carotovora.

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15
Q

Conclusions

A

Microbes display a surprising array of complex social behaviors

—— The molecular mechanisms of some of these have been elucidated – examples include QS and Olfaction

—— Knowledge of these systems suggests ways to combat microbes by preventing their ability to communicate.

—— Bacteria have already thought of that !

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16
Q

How may nanowires be involved in communication?

A

—— New discovery – electrically conductive pili

—— Used as a terminal electron acceptor

—— Do cells communicate through these wires ?

—— What information is being shared ?

—— Can we use this for biotechnological applications ?

17
Q

The evolution of social behavior in microorganisms

What social behaviours are discussed?

A

Complex social behaviors include cooperation in foraging, building, reproducing/suicide , dispersing and communicating.

18
Q

The evolution of social behavior in microorganisms

Cooperation in foraging

A

(Crespi, 2001)

Cooperation in foraging

  • Macroscopic social organisms cooperate to protect themselves from enemies or the elements, and to secure food, reproduction or dispersal to a new locality.
  • 2 types
    • Egalitarian, all individuals contribute and gain more or less equally
    • division of labor, individuals engage in different tasks from which they might obtain different rewards
19
Q

The evolution of social behavior in microorganisms

Shelter

A

(Crespi, 2001)

  • Bio-films – which exhibit organized structures with a three-dimensional shape
  • The extracellular polymer matrix of biofilms provides protection from desiccation, toxins and antibiotics, and it might also serve to bind and hold nutrients and enhance physiological stability
20
Q

The evolution of social behavior in microorganisms

Foraging

A

(Crespi, 2001)

Foraging

  • Many pathogenic bacteria of humans, such as Salmonella and Staphylococcus, only release virulence factors once they have reached high enough numbers to have a better chance of withstanding the human immune response.
  • Pfiesteria dinoflagellates act as ambush predators, synchronously releasing toxins to kill all fish over many km2, after which the dinoflagellates feed on the carcasses
21
Q

The evolution of social behavior in microorganisms

Reproduction / suicide

A

(Crespi, 2001)

Reproduction

  • Programmed suicide might also function in defense: in E. coli, cells attacked by bacteriophage will stop producing a short-lived antidote to a long-lived toxin that they have also been producing, thereby bringing about their own demise with that of the phage. Such suicide could prevent nearby clonemates from also being attacked by the phage.
  • E. coli, cell suicide might also serve as an adaptation to food limitation, in that E. coli starved for amino acids or C will undergo programmed death, thus possibly providing more food for the remaining bacteria
22
Q

The evolution of social behavior in microorganisms

Dispersing

A

(Crespi, 2001)

Dispersing

  • Cooperative dispersal has long been known in Dictyostelium slime molds, which exhibit chemically coordinated aggregation in response to starvation, followed by the formation of fruiting bodies that help to lift cells above the substrate, where they might, as spores, be better dispersed.
  • In some species of Dictyostelium, cells in the stalk of the fruiting body do not differentiate into spores, whereas in other species, the stalk is either acellular or all the stalk cells develop into spores so that all aggregates can develop and disperse
23
Q

The evolution of social behavior in microorganisms

Communicating

A

(Crespi, 2001)

Communicating

  • One puzzling feature of quorum-sensing systems is that although some are species-specific, others are shared between species in a genus or even between genera, such that some bacteria might be detecting the signaling molecules of heterospecifics.
  • Could such crosstalk be adaptive to both the sender and receiver, or might it involve cheating, deception, or exploitation, as in many animal communication systems?
24
Q

Quorum Sensing in the signal – response systems in Gram-negative bacteria

Describe quorum sensing

A

Quorum Sensing in signal – response systems in Gram negative bacteria

(Papenfort and Bassler, 2016)

Quorum sensing relies on the production, release, detection and group-level response to extracellular signaling molecules, which are called autoinducers. It allows bacteria to collectively modify behavior in response to changes in in the cell density and species composition of the surrounding microbial community.

25
Q

Quorum Sensing in the signal – response systems in Gram-negative bacteria

How does quorum sensing work?

A

(Papenfort and Bassler, 2016)

  • In Gram-negative bacteria, autoinducers are often produced from S-adenosylmethionine (SAM) whereas in gram positive bacteria typically use secreted oligopeptides and two compartment systems.
  • Quorum sensing receptors are either membrane-bound histidine sensor kinases or cytoplasmic transcription factors.
  • Signal integration is a process that takes place in most Gram-negative bacteria when several autoinducers and receptors work in parallel, or in series, to synchronize functions that are controlled by quorum sensing. Processes such as bioluminescence, the production of virulence factors and the formation of biofilms are controlled by quorum sensing.
26
Q

Quorum Sensing in the signal – response systems in Gram-negative bacteria

What does quorum sensing allow?

A

(Papenfort and Bassler, 2016) article in nature

  • Quorum sensing shapes the composition of microbial communities. For example, bacterial species in the human gut microbiota produce and respond to autoinducers. There is increasing evidence that quorum sensing controls key physiological processes in the gut and may affect the virulence programmes of invading pathogens. Host cells are also known to produce autoinducer mimics.
  • Synthetic quorum sensing modulators are molecules that agonize or antagonize quorum sensing and they are being developed as anti-virulence medicines. Distinct from traditional antibiotics, quorum sensing modulators do not affect the growth of pathogenic bacteria, but rather, disrupt their virulence programs.
27
Q

Study - quorum sensing - enzyme

A

Quenching quorum sensing dependent bacterial infection by an N-acyl homoserine lactonase
(Dong et al, 2001) LETTERS TO NATURE
Quorum sensing signals such as acyl-homoserine lactones (AHL) regulate the virulence (harmfulness) of a range of plant and animal pathogens. This paper shows that a new enzyme produced by Bacillus sp AHL-lactonase has the ability to quench/ inactivate the three AHL hormones by breaking it down.
Study:
They introduced a gene for AHL-lactonase and a fusion gene to direct the hormone to the intracellular space where the bacteria initiates infection into tobacco and potato plants. The transgenic lines were then tested for maceration when inoculated with the bacterium Erwinia carotovora.
Results:
In a tobacco transgenic line with high levels of AHL the areas of maceration were less than 5% of the untransformed, this indicates a strong correlation between disease resistance and AHL lactonase expression level.
Once maceration was initiated in the transgenic tissue reduce the rate of infection