Signalling pathways in development Flashcards

1
Q

What is cell-cell signalling is essential for?

A

induction, regulation, patterning, cell division etc

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What are the different modes of sending and receiving signals?

A

Cell-cell or cell-substratum contact, diffusible/paracrine signals

Signal transduction pathways via cytoplasm or cytoskeleton

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What do responses to signals include?

A

alteration of gene expression

alteration of cell behaviour

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Why can we study signalling pathways in different species?

A

The same signalling mechanisms perform the same/similar functions in different species

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What does signal transduction often involve?

A

phosphorylation of proteins
mediated by kinases
only on Ser/Thr/Tyr

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What regulates the signal?

A

Feedback mechanisms: positive and negative feedback loops exist

Different pathways interact with one another to achieve, or modify, their effects

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Name major classes of signalling molecules?

A
Receptor Tyrosine Kinases
Hedgehog
Wnts
Transforming Growth Factor b superfamily
Cytokines (Thyroid Hormone, Retinoids)
Notch/Delta
Eph/ephrins
Semaphorins
Extracellular matrix
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What diseases associated with connexin mutation?

A

Eye defects - cataracts, micropthalmia Cx 26, 45, 50

Skin disorders Cx 26, 30, 31

Deafness Cx 26, 30, 31

Mouse models similar, also heart defects, embryonic lethality

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What occurs during EMT?

A
  • dissolution of cell-cell junctions
  • cytoskeletal rearragnements
  • increased motility
  • synthesis of ECM
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

When is EMT involved in development?

A

-Gastrulation; formation of the mesoderm by EMT produces the third embryonic cell layer

Neural crest delamination- EMT of neuroepithelial cells in the key step for induction of the neural crest

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What causes induction of EMT?

A

EC signals e.g. BMP/TFGbeta/Wnet/FGF/MMPs–> causes cytoplasmic effectors (SMADs, GSK-3beta, NK-kappaB, MAPK, cytoskeleton, ROS)–>= nuclear regulators of transcription

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Describe actin-integrin linkage

A

Single pass transmembrane proteins

Alpha/beta heterodimers in various combinations confer binding specificity

Signalling can occur in both directions

Link to actin cytoskeleton

FAK links to intracellular kinases

The actin-integrin linkage. The linkage between the extracellular matrix and the actin cytoskeleton is depicted. Integrins can bind directly to the talin head domain. Through its tail domain, talin can bind directly to actin as well as to other components of the linkage, such as vinculin. Vinculin can also bind to actin directly, as well as to the actin cross-linker α-actinin. Both vinculin and α-actinin are anchored to the membrane, and their activity is modulated by interactions with phosphatidylinositol (4,5)-bisphosphate (PIP2). Finally, vinculin and FAK can bind to the actin nucleator Arp2/3

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Give examples of nuclear hormone receptors

A

E2, RA

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What are Receptor Tyrosine kinases?

A
Single pass, trans-membrane receptors
Specific tyrosine residues phosphorylated upon ligand binding
Autophosphorylation
Ligands are dimers, receptors dimerise
PDGF, EGF, FGF, VEGF
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What pathways can the EGF receptor activate?

A
  • PLC (Pip2/Dag-IP3)
  • JAK/STAT
  • Ras/Raf
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What causes achondroplasia?

A

FGFR3
Autosomal dominant mutation affecting endochondral bone formation

80% of patients have activating mutations in FGFR-3 (G380R, within the trans-membrane region)

Constitutive ERK (MAPK) activation
inhibits chondrocyte differentiation to hypertrophic form
inhibits PTHrP/PTHR, required for chondrocyte proliferation

17
Q

What is achondroplasia?

A

(most common cause of dwarfism) - shortening of long bones of limbs, short stature, macrocephaly

18
Q

What does Dominant negative PDGFR- blocks ?

A

Xenopus gastrulation

19
Q

What can act as mesoderm inducer in xenopus mesoderm induction?

A

Activin

20
Q

What family is activin part of?

A

TGF-beta superfamily

21
Q

Describe xenopus activin gradients

A

100 ng Activin= heart and cartilage
10-50ng= notochord
5-10= muscle
0.1-1= lymphocyte/erythrocyte/vascular tissue

22
Q

What do morphogens do?

A

A morphogen is an inducing factor that can induce different cell fates depending on its concentration
A morphogen gradient requires a source and a sink

23
Q

Describe the TGF beta superfamily

A

Single-pass transmembrane Serine / Threonine kinases
Ligands include TGF, activins, BMPs, myostatin
Receptor phosphorylation leads to SMAD activation
sma - small
MAD - mothers against decapentaplegic

24
Q

What SMADs respond to BMPS?

A

Smad 1,5,8

respond to BMPs

25
Q

What SMADs respond to TGF-beta?

A

Smad 2,3

respond to TGF

26
Q

What SMADs are inhibitory?

A

Smad 6,7

are inhibitory and compete with Smad 4

27
Q

How do we know SMAD2 and 4 dimerise?

A

Visualising protein interactions using bi-molecular fluorescence: Use GFP protein (Venus)- chop it in half