SGT5: Cytoskeleton Flashcards

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1
Q

What are the functions of the cytoskeleton?

A
  • Provides shape, support, and resistance to external forces to allow cell migration, division and maintenance
  • Enables dynamic changes in cell structure from environmental changes
  • Attaches cells together connections to the external environments, generating
    co-ordinated forces for movement
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2
Q

What types of cytoskeletal filaments do you know?

A
  • Actin filaments
  • Microtubules
  • Intermediate filaments
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3
Q

What are actin filaments?

A
  • Composed of actin
  • Involved in cell shape, motility and division, mainly in muscle contraction and intracellular transport).
  • Forms using ATP not GTP through polymerisation of actin
  • Has polarity with a positive/plus (‘barbed’) end where new monomers are added to the filament and a negative/minus (‘pointed’) end where disassembly occurs
  • 2 types of actin - G-actin which is globular, monomeric and F-actin, which is filamentous, polymerised to form filaments arranged in a twisted chain
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4
Q

What are intermediate filaments?

A
  • Provide tensile strength to cells to maintain integrity, including keratins
  • Form rod-like structure which are really stable
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4
Q

What are microtubules?

A
  • Tubulin subunits form a dimer of alpha and beta
  • Form the spindle fibres in cell division
  • Provide structural support for cilia and flagella and act as tracks for motor proteins like kinesis and dynein in transport)
  • Uses GTP to form the dimer
  • Has both a positive and negative end due to differences in polarity
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5
Q

What proteins controlling the cytoskeletal architecture do you know?

A
  • Tubulin (dimers of alpha and beta)
  • Microtubule-associated proteins – interact with microtubules to stabilise them and control organisation, linking them to other cell components
  • Actin-binding proteins such as formin, profilin, Arp2/3 in nucleation, ADF/cofilin in capping and GTPases (cdc42, Rho, Rac) as regulatory proteins.
  • Keratin, vimentin and lamin form intermediate filaments
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6
Q

What are 3 examples of GTPases?

A
  • Cdc42
  • Rho
  • Rac
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7
Q

What protein is used in actin nucleation?

A

Arp2/3

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8
Q

What protein is used in actin capping?

A

ADF/cofilin

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9
Q

How is actin organised in a cell? What actin structures do you know?

A
  • Stabilise, organise and modulate actin filaments, forming structure like microvilli and enable cell movement
  • Filopodium – tight parallel bundles
  • Stress fibres – hold the cell in place and are contractile bundles
  • Mesh-like networks but allows the shape of the cell – cortical actin
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10
Q

What controls actin polymerisation?

A
  • ATP is bound and hydrolysed in actin polymerisation
  • ATP-bound G-actin can polymerise into F-actin, and subsequent ATP hydrolysis destabilises F-actin, enabling actin filament turnover
  • 3 GTPases – Rho, Rac and Cdc42
  • Stress fibres are formed between focal adhesions using Rho GTPases
  • Cdc42 aids in the formation of filopodium
  • Rac GTPases form lamellipodium
  • Activate monomer binding proteins – sequester and release
  • Activate polymer binding proteins – bundling, cross-linking, severing and contracting
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11
Q

How do cells move?

A
  • Stress fibres form between focal adhesions
  • Back and top edges of the cell are rounded, leading edge does not contact substratum.
  • Protrusion – requires actin polymerisation, membrane insertion or protrusion. The back of the cell remains the same. Focal adhesions form at the front of the cell
  • Front becomes rounded and the back becomes elongated.
  • Translocation – formation of new adhesions, actin-myosin contractility of stress fibres and traction
  • Formation of retraction fibres at the back of the cell, using actin-modulating proteins to degrade the actin stress fibres at the back – detachment – actin polymerisation generates cellular movement.
  • Actin-binding proteins regulate the polymerisation and organisation of actin filaments, enabling the cell to push its membrane forward in the direction of movement
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12
Q

What is responsible for the movement of vesicles and organelles in cells?

A
  • Conventional kinesins are primarily involved in transporting vesicles and organelles along microtubules toward the cell periphery
  • Cytoplasmic dynein transports organelles and vesicles along microtubules
  • The cytoskeleton and motor proteins primarily – work symbiotically
  • Motor proteins use myosin interacting with actin and dyneins and kinesins interact with microtubules
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13
Q

Explain how the motor proteins function in cells?

A
  • Motor proteins are enzymes that convert chemical energy, like ATP, into mechanical energy to produce movement within the cell
  • ATP hydrolysis causes a conformational change in the motor protein’s structure, which is then transmitted as movement along cytoskeletal filaments
  • The tail domain of motor proteins binds to specific cargo, allowing the motor protein to transport various vesicles, organelles, or other cellular materials
  • Motor proteins have inherent directionality toward either the plus or minus end of filaments, ensuring targeted transport within cells
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14
Q

What are processive motor proteins?

A
  • A processive motor protein is a motor that coordinates its heads to stay attached to the filament continuously, allowing smooth movement, as seen with kinesin and some myosin’s.
  • Make many steps before detaching form the track
  • Single motor molecule is sufficient to transport cargo over a significant distance
  • In most cases these are dimeric, moving ‘hand-over-hand’
  • Many become non-processive monomers
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15
Q

What are non-processive motor proteins?

A
  • A non-processive motor protein is a motor that does not coordinate its heads and may detach from the filament intermittently, such as myosin in muscle contraction.
  • Dissociate from track after each step
  • Uncoordinated attachment/detachment
  • Can still move loads over long distances
  • Co-operate in large numbers
16
Q

What is the structure of myosin?

A
  • Head domain: binds to F-actin and ATP, uses ATP hydrolysis to generate ‘force’
  • Neck domain: acts as a linker and works as a lever to transport the force generated by the head
  • Tail domain: mediates interactions with cargo molecules or other myosin tail regions.
17
Q

How does myosin move?

A
  • ATP binds to myosin and the myosin head group is released
  • ATP is hydrolysed and the myosin head group ‘cocks’
  • Pi is released and the myosin head group binds to actin
  • ADP is released and the myosin ‘powerstroke’ occurs – moves everything along and returns to the correct orientation
18
Q

What are the structure of kinesins?

A
  • Head domain: binds to microtubules and to ATP, uses ATP hydrolysis to generate ‘force’
  • Neck domain: acts as a linker to transduce the force generated by the head
  • Tail domain: mediated interactions with cargo molecules and kinesin regulatory chains
19
Q

What are the structure of dyneins?

A
  • Two identical heavy chains (>500 kDa) forming the head domains
  • These head domains interact with the microtubules and contain the ATPase motor domain
  • Stalk and several intermediate chains and light chains
  • Cargos are attached via a complex of accessory proteins
20
Q

How do cytosolic dyneins move?

A
  • ATP bound state (stalk not attached to microtubules)
  • ATP hydrolysis causes stalk to attach to microtubules
  • Release of ADP and Pi, binding the dyneins to the microtubule
  • Causes a powerstroke causing a conformational change that moves the dynein along the microtubule