Sex-linked inheritance/pedigree Flashcards

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1
Q

Who was Thomas Hunt Morgan and what did he study?

A
  • Thomas Hunt Morgan was the first to associate a specific gene with a specific chromosome
  • Morgan spent a year looking for variations among the flies he was breeding
  • Unexpectedly, Morgan found that the eye color gene was inherited in different patterns by male and female flies
  • During his studies, Morgan discovered a single male fly with white eyes instead of usual red
    o Most common character phenotype is wild type (i.e., red eyes)
    o Less common character phenotype is mutant (i.e., white eyes)
  • In one experiment, Morgan mated male flies with white eyes with female flies with red eyes:
    o F1 generation all had red eyes
    Therefore, the real interesting finding by Morgan came when he performed experiments that involved the matings of F1 flies to make the F2 generation
    o Males and females from F1 generation mated to give rise to the F2 generation, showed 3 red : 1 white eye ratio (males had white eyes)
    o White-eyed trait appeared only in males
    o All females and half the males had red eyes
  • Morgan concluded that fly’s eye color was linked to its biological sex
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2
Q

Why did Morgan Hunt use drosophilia?

A

Drosophila melanogaster, a fruit fly species that eats fungi on fruit
o Fruit flies are prolific breeders and have a generation time of two weeks
o Fruit flies have three pairs of autosomes and a pair of sex chromosomes (XX in females, XY in males)

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3
Q

What are unlinked genes?

A

Genes that are not near each other on the same chromosome (or found on separate chromosomes), are called unlinked genes
– Such genes are not inherited together often as a set
– For genes that are far apart on the same chromosome, there is frequent crossing over that occurs (at prophase I) between homologous chromosomes
* Unlinked genes follow Mendel’s law independent assortment
* all possible combination of maternal and paternal alleles are equally likely (25%) in each gamete/four daughter cells from meiosis

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4
Q

What are linked genes?

A

Genes located near each other on the same chromosome are called linked genes since tend to travel together during meiosis and fertilization
– Such genes are often inherited as a set as crossing over between homologous chromosomes is very rare between genes that are very close together
- recombinant chromosomes do form but not very likely (mix of maternal/paternal alleles)
* Linked genes do not follow Mendel’s law independent assortment
- gametes made most likely have the same allele combination of parents (48% maternal or 48% paternal), and only small likelihood of recombinant gametes (2% and 2%)

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5
Q

What is incomplete linkage (what study did thomas morgan hunt do to discover this)?

A

Morgan did other experiments with fruit flies to see how linkage affects inheritance of two different characters (so looking at two genes)
* Morgan observed this linkage when he followed inheritance of characters for body color and wing size (both traits are autosomal):
o Wild-type body color is gray (b+) and mutant is black (b)
o Wild-type wing size is normal (vg+) and mutant has vestigial wings (vg)
* Morgan crossed females heterozygous for both genes (b+bvg+vg) with mutant males homozygous for both genes (bbvgvg)
- According to independent assortment (i.e., unlinked genes), this should produce four phenotypes in a 1:1:1:1 ratio
- Surprisingly, when Morgan performed the experiment, he did not get a 1:1:1:1 ratio
– He observed a large number of flies were wild-type (gray-normal) and double-mutant (black-vestigial) among the offspring, but also there were a small number of flies with recombinant phenotypes (gray-vestigial and black-normal)
– The results of Morgan’s testcross for body color and wing shape did not conform to either unlinked or completely linked genes
– If both genes are unlinked, we should expect to see a a 1:1:1:1 phenotypic ratio (1 gray-normal: 1 black-vestigial: 1 gray-vestigial: 1 black-normal)
– If both genes are completely linked, we should expect to see a 1:1:0:0 ratio with only parental phenotypes among offspring (1 gray-normal: 1 black- vestigial: 0 gray-vestigial: 0 black-normal)
- Most of the offspring had parental phenotypes (gray-normal and black-vestigial) suggesting linkage between genes
* However, 17% of flies were recombinants (i.e., gray-vestigial and black-normal), suggesting incomplete linkage
- This means that genes for body color and wing shape are located very close to each other on the same chromosome (but the short distance between these genes still allows for crossing over to occur – even though it would be very seldom)

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6
Q

What are sex-linked genes and how are males mostly affected?

A

A gene located on either sex chromosome is called a sex-linked gene
* Human X chromosome contains approximately 1100 genes, whereas the Y chromosome contains only 78 genes
* Therefore, most sex-linked genes are found on the X chromosome
If sex-linked trait is due to a recessive allele, a female will have this trait only if homozygous (heterozygous females will be carriers)
* Since males have only one X chromosome, any male receiving the recessive allele from his mother will express the sex-linked trait
– Therefore, males are far more likely to inherit sex-linked recessive disorders compared to females
* Several serious human disorders are sex-linked

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7
Q

What is Duchenne Muscular Dystrophy?

A
  • Affected individuals rarely live past their early 20s (affects
    1 in 3,500 males in USA)
    o Disorder due to absence of an X-linked gene for a muscle
    protein called dystrophin
    – Dystrophin is part of a group of proteins (a protein complex) that work together to strengthen muscle fibers and protect them from injury as muscles contract and relax
    o Characterized by progressive weakening of muscles
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8
Q

What is hemophilia?

A
  • X-linked disease
    Absence of one or more clotting factors (normally there are 13 blood clotting proteins that combine to form a clot)
    o Individuals have prolonged bleeding because a firm clot forms slowly
    o Bleeding in muscles and joints can be painful and lead to serious damage
    o Individuals can be treated with intravenous injections of the missing protein
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9
Q

What is hypertrichosis?

A
  • X-linked
    Can be either congenital (present at birth) or acquired later in life
    o Result in excessive or animal-like hair on both face and body
    o Two distinct types: generalized hypertrichosis (which occurs over the entire body) and localized hypertrichosis (which is restricted to a certain area)
    o Unfortunately, some of these people have been displayed in carnival sideshows with names such as “dog-boy” or the “bearded lady”
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10
Q

What is non-disjunction?

A

Pairs of homologous chromosomes do not separate normally during meiosis (i.e., at meiosis I or II)
o Gametes contain two copies or no copies of a particular chromosome
o As a consequence of non-disjunction, some gametes receive two of the same type of chromosome and another gamete receives no copy

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11
Q

What is aneuploidy?

A

occurrence of extra or missing chromosomes due to non-disjunction, which leads to an unbalanced chromosome complement (if organism survives, aneuploidy typically leads to a distinct phenotype)

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12
Q

What is down syndrome?

A

One aneuploid condition, Down syndrome, is due to three copies of chromosome 21
* Although chromosome 21 is one of the smallest human chromosomes, it severely alters an individual’s phenotype in specific ways
* Most cases of Down syndrome result from non- disjunction during gamete production in one parent
* Frequency correlates with age of mother (***father)
– This may be linked to some age-dependent abnormality in the spindle checkpoint during meiosis I, leading to non-disjunction

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13
Q

What are examples of non-disjunction of sex-chromosomes?

A
  • Non-disjunction of sex chromosomes produces a variety of aneuploid conditions in humans:
  • Klinefelter’s syndrome (XXY)
  • Monosomy X or Turner’s syndrome (X0 or X-)
  • Trisomy X (XXX)
  • Jacob’s syndrome (XYY)
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14
Q

What is trisomy X?

A

XXX (three X chromosomes)
- Healthy females with mild to severe symptoms of developmental delays (learning disabilities, delayed speech/ language development)
– Capable of reproducing (limited)

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15
Q

What is Jacob’s syndrome?

A
  • XYY
  • Occurs when male inherits two Y chromosomes from father instead of one
    – Often are taller than average (which becomes apparent at age of five or six) with an average final height approximately 7 cm (3”) above expected final height
    – Often have below normal intelligence (learning disabilities have been reported in up to 50% of cases, most commonly speech delays and language problems…reading difficulties are common due to an increased incidence of dyslexia)
    – Males that are XYY are still able to have children
    – At one time (~1970s), it was thought that these men were likely to be criminally aggressive, but this hypothesis has been disproven over time
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16
Q

What is cri-du chat?

A

Structural alterations of chromosomes can also cause human disorders
* One syndrome, cri du chat, results from a specific deletion in chromosome 5
* Symptoms:
– Distinct facial features (i.e., wide-set
eyes, small head, small jaw)
– Severe cognitive, speech, and motor delays
– High-pitched cry like the sound of a distressed cat [due to larynx (i.e., voice- box) not developing correctly]

17
Q

In an allelic series, how can you tell which is the recessive?

A

the stronger the mutation, the more recessive the allele is!

18
Q

What is homogametic vs heterogametic sex?

A

Homogametic sex
– Producing like chromosomes (i.e., zygotes with two X chromosomes)
– Results in female offspring
Heterogametic sex
– Producing unlike chromosomes (i.e., zygotes with one X and one Y chromosome)
– Results in male offspring

19
Q

What species do not follow the heterogametic/homogametic definitions?

A

ZZ/ZW sex determination in birds, reptiles, frogs, fish and some insects (such as butterflies and moths)
o Females are the heterogametic (ZW) sex
o Males are the homogametic (ZZ) sex
o The Z chromosome is larger and has more genes, like the X chromosome in the XY sex determination system
o The W chromosome is smaller and has fewer genes, like the Y chromosome in the XY sex determination system

20
Q

What are homomorphic vs heteromorphic chromosomes?

A

Homomorphic chromosomes
– Morphologically identical chromosomes that make up a homologous pair
(involving autosomes, XX genotype, ZZ genotype)
– These chromosomes are of the same length and have the same genetic composition, the genes are identical to each other, but they may have little variation in them (for example: one gene may have the mutation)
Heteromorphic chromosomes
– Morphologically dissimilar (non-identical) chromosomes (involving XY
genotype and ZW genotype)
– These chromosomes have different size, shape, and genetic composition

21
Q

What does hemizygous mean?

A

Hemizygous describes a genotype consisting of only a single copy of a particular gene in an otherwise diploid organism
– Hemizygosity is observed when one copy of a gene is deleted, or, in the
heterogametic sex, when a gene is located on a sex chromosome (ex. X^aY)

22
Q

What are PARs (pseudoautosomal
regions)

A
  • Present on both ends of Y chromosome are PARs (pseudoautosomal
    regions) that share homology with regions on X chromosome
    o This allows for Y chromosome to synapse and recombine with X during meiosis
  • Pseudoautosomal regions (PAR1 and PAR2) behave like an autosome and recombine during meiosis (i.e., crossing over occurs)
    o PAR1- located at tip of the short arm of the sex chromosome
    o PAR2–located at tip of the long arm of the sex chromosome
    – Thus, genes in this region are inherited in an autosomal rather than a strictly sex-linked fashion
23
Q

What is MSY (Male-specific region of the Y)?

A
  • Non-recombining region of Y chromosome – makes up the remainder of the Y chromosome, about 95%, that does not synapse or recombine with the X chromosome
    o MSY divided about equally between euchromatic regions (containing functional genes) and heterochromatic regions (lacking genes)
    o contains the SRY
24
Q

What is the SRY (Sex-determining region Y) and what is the pathway of sex development?

A

Located adjacent to PAR 1 of the short arm of Y chromosome
o Controls male development by encoding a protein called Testis-determining factor (TDF) – this is a transcriptional factor protein that elicits a cascade of gene transcription and developmental events that ultimately produce male internal and external structures
» TDF produces testis
» The testis produces a hormone called MIF (Mullerian Inhibiting Factor), which causes degeneration of female organs.
» The testis also produces testosterone, which promotes the development of male sex characteristics.
Females do not possess the SRY gene (do not have a Y chromosome), and so do not produce TDF and form testes, and so there is no degeneration of female organs
o At 6–8 weeks of development, SRY gene becomes active in XY embryos

25
Q

What are Barr Bodies?

A
  • Although female mammals inherit two X chromosomes, only one X chromosome is active!!
  • During female development, one X chromosome per cell condenses into a compact object called a Barr body
    – Early in mammalian gestational development, about 2 weeks after fertilization in humans (more specifically, when the female early embryo consists of a few hundred cells), one of the two X chromosomes in each somatic cell of a female is randomly inactivated
  • Designated as a darkly stained region near the nuclear envelope (or periphery of the nucleus) of each somatic cell
  • Most of the genes on the Barr-body chromosome are not expressed
  • The condensed Barr-body chromosome is reactivated in ovarian cells that produce ova
  • Total number Barr bodies follows N − 1 rule (N = total number of X chromosomes)
    o So, XX females have one Barr body per cell, XXX females have 2 Barr bodies per cell, and XXY Klinefelter males have one Barr body per cell (Barr bodies are not observed in XY males)
26
Q

Who is Mary Lyon and what did she discover?

A

Mary Lyon, a British geneticist, demonstrated that selection of which X chromosome will form the Barr body occurs randomly and independently in embryonic cells at the time of X inactivation
- after X inactivation, all descendents of cells that had activated maternal x chromosome (but inactivated paternal X chromosome) will also have the same pattern, and vice versa
– In approximately one-half of the somatic cells in a female embryo, the maternally derived X chromosome is inactivated; and in the other half of the somatic cells, inactivation silences the paternally derived X chromosome
– At the end of this process, each somatic cell of a female has one active X chromosome that is equally likely to be the maternal X or the paternal

27
Q

What is an example of barr boddies/X inactivation affecting phenotype?

A

In most cases, the silencing of one X chromosome in each cell has no detectable effect on the function of a tissue or on the phenotype
– Occasionally, however, female carriers of X-linked recessive traits display a phenotypic manifestation of the recessive allele
– For example, tortoiseshell color-coat patterning in female cats is a product of mosaicism created by random X inactivation
- Females with an allele for black coat color on one X chromosome and orange coat on the homologous chromosome have black and orange patches of fur corresponding to portion of skin where each X chromosome is active
– The sizes and distribution of the orange and black sectors of these cats reflect the locations of the clonal descendants of the cells in which each X chromosome was originally inactivated

28
Q

What is the gene XIST?

A
  • X-inactive specific transcript
    – This gene is active only on the Barr-body chromosome and produces multiple copies of an RNA molecule that spread out and cover (or paint) the the X chromosome from which they were made
    – This initiates X inactivation
29
Q

How do X-linked recessive and X-linked dominant traits/diseases affect females/males differently?

A
  • X-linked recessive traits more likley to be seen in males
  • X-linked dominant traits more likley to be seen in females (since females have 2 X chromosomes, so the healthy X chromosome which contains the normal allele can make up for the mutated allele, but males don’t have that so it can be more deadly and so more likely to be aborted or die prematurely)
30
Q

What is an example of an X-linked dominant trait?

A

Rett Syndrome
- a rare neurological and developmental disorder that affects the way the brain develops, causing progressive loss of motor skills and speech – primarily affects girls
- repetitive hand movements

31
Q

What are examples of X-linked recessive traits?

A

red-green color blindness and hemophilia

32
Q

What are examples of Y-linked traits/disorders?

A

hypertrichosis of the ears (hairy ears), webbed toes and porcupine skin disorder (skin thickens and gradually becomes darker, scaly, and rough with bristle-like outgrowths)

33
Q

Why can’t males transmit their mitochondria to offspring?

A

Sperm-derived paternal mitochondria enter the egg cytoplasm upon fertilization and then normally disappear during early embryogenesis (although the mechanism is not completely understood)
One suggested mechanism occurs within minutes of fertilization, in which large vesicles called autophagosomes begin to engulf sperm mitochondria
– Sperm-derived mitochondria sequestered by these autophagosomes are then cleared by lysosomes during early embryogenesis (1)

34
Q

What is an example of mtDNA-linked disease?

A

Pearson syndrome (problems with the development of blood-forming hematopoietic cells in the bone marrow that have the potential to develop into different types of blood cells)

35
Q

What is penetrance?

A

Penetrance is the proportion of individuals (usually expressed as a percentage) with a particular genotype that display a corresponding phenotype
– For example, since all pea plants that are homozygous for the allele for white flowers (e.g. aa) actually have white flowers, this genotype is completely penetrant (or 100% penetrance)
– In contrast, many human genetic diseases are incompletely penetrant (or have reduced penetrance or variable penetrance), since not all individuals with the disease-associated genotype actually develop symptoms of the disease

36
Q

What is expressivity?

A

Expressivity on the other hand refers to variation in phenotypic expression when an allele is penetrant
– In all the examples we have seen so far, all alleles have had 100% expressivity, meaning a specific genotype will produce a specific phenotype 100% of the time
– Expressivity is often described as narrow (limited) or broad (variable)
– For example, since all pea plants that are homozygous recessive for the allele for white flowers (e.g. aa) actually have white flowers, this genotype represents narrow expressivity
– In contrast, many human genetic diseases provide examples of broad (variable) expressivity, since individuals with the same genotypes may vary greatly in the severity of their symptoms

37
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A