Session 1: Chromosomes, DNA and Nucleotides Flashcards

1
Q

What is molecular biology?

A

Flow of genetic information within a biological system

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2
Q

What is a polynucleotide?

A

Linear polymer of nucleic acid monomers

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3
Q

What sugar is found in DNA?

A

Deoxyribose

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4
Q

What sugar is found in RNA?

A

Ribose

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5
Q

What is a nucleotide?

A

Basic building block of nucleic acids that consists of a pentose sugar molecule (ribose in RNA or deoxyribose in DNA) attached to a phosphate group and a nitrogen-containing base

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6
Q

What is a nucleoside?

A

Nitrogenous base + sugar

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7
Q

What is the difference between deoxyribose and ribose structure?

A

Ribose sugar has a hydroxyl (OH) group at position 2, whereas deoxyribose sugar has a hydrogen (H) atom at position 2

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8
Q

What are purines?

A

Bases with a double-ring structure. Adenine (A) and Guanine (G)

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9
Q

What are pyrimidines?

A

Bases with a single-ring structure. Cytosine (C), Thymine (T), Uracil (U)

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10
Q

What bond joins the pentose sugar and nitrogenous base within a nucleotide?

A

Glycosidic bond

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11
Q

What type of bonds join nucleotides?

A

Phosphodiester

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12
Q

By convention, how is polynucleotide primary structure read?

A

From the 5’ to 3’ end

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13
Q

What is the secondary structure of DNA?

A

Double helix

Base pairs form the rungs of the ladder; Sugar phosphate backbone

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14
Q

What bonds join the DNA double helix?

A

Hydrogen

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15
Q

Why is DNA negatively charged?

A

Phosphate groups

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16
Q

Describe some features of DNA’s double-helix secondary structure.

A
  • Two anti-parallel, complementary strands from 5’ to 3’
  • Right-handed helix
  • Negatively-charged
  • Sugar phosphate backbone
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17
Q

What is the diameter of DNA?

A

2nm

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18
Q

What is the length of one turn of DNA?

A

3.4nm

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19
Q

What is the structure of RNA?

A

Single-stranded

20
Q

What bases bind in RNA?

A

Adenine and Uracil; Guanine and Cytosine

21
Q

What types of secondary structure can RNA form?

A

The RNA stem can loop to produce…
- Hairpin structure
- Clover-leaf structure (e.g., t-RNA)

22
Q

Where does DNA exist in the nucleus?

A

In complex with histone proteins

23
Q

What is chromatin?

A

DNA + histones

24
Q

What is the function of chromatin?

A

Efficiently package long DNA into a small volume (compact, condensed) to fit into the nucleus of a cell and protect the DNA structure and sequence

25
What is the basic repeating structural and functional unit of chromatin?
Nucleosome
26
What is a chromatosome?
Consists of a nucleosome and an H1 histone protein.
27
What is a histone octamer?
Two each of H2A, H2B, H3, and H4 form the protein complex which DNA wraps around (wraps around 1.7 turns of DNA - 146 base pairs)
28
When are chromosomes most compacted and visible under a light microscope?
During metaphase
29
What is heterochromatin?
Tightly packed DNA, transcriptionally inactive
30
What is euchromatin?
Loosely packed DNA, transcriptionally active
31
How many chromosomes are in each diploid cell of our body?
46
32
How many pairs of chromosomes do humans have?
23 pairs
33
How many pairs of autosomes do humans have?
22 pairs of autosomes; 1 pair of sex chromosomes (XX = Female; XY = Male)
34
What is a karyotype?
A display of the chromosome pairs of a cell arranged by size and shape.
35
What are chromosome territories?
Regions of the nucleus preferentially occupied by particular chromosomes
36
What type of arrangements do chromosomes have?
Non-random
37
Why is the spatial localization of chromosome territories important?
For gene expression
38
What does the position of chromosomes relative to one another reflect?
Variation in gene expression pattern
39
What is a chromatid?
One of two identical halves of a replicated chromosome
40
Why is it important for chromosomes to replicate before cell division?
This allows each daughter cell to receive a complete set of chromosomes
41
What is the structure of a chromosome?
2 sister chromatids attached by a centromere; identical DNA
42
Where is the CFTR mutation located for cystic fibrosis?
Chromosome 7
43
What is DiGeorge Syndrome?
Deletion in chromosome 22
44
What is Down Syndrome?
Additional copy of chromosome 21, Trisomy 21
45
What is a gene?
Basic unit of heredity that consists of a segment of DNA that encodes a gene product, either protein or RNA
46
What are some examples of non-coding regions of DNA?
- Introns - LINEs (Long Interspersed Nuclear Elements) - SINEs (Short Interspersed Nuclear Elements) - Regulatory DNA sequences