Second Set of VIR Cards (Dz-specific) Flashcards
Common Cold (most common cause)
Family = ?; Genus = ?
Epidem = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Picornaviridae; Genus = Enterovirus; Species = Human rhinovirus
Epidem = worldwide; worse in fall/winter; most common cause of infection in humans
Pathogen w/ s/sx = spread via aerosol AND indirectly via contaminated surfaces; prefer lower temps of nasopharynx; causes common cold (sneezing, nasal discharge, sore throat, cough, headache, maybe chills but few systemic sx), lasts 1 week; does NOT grow in low pH (i.e. highly labile at low pH)
Dx = clinically, but could technically dx from cell culture
Vaccines? = no, too many serotypes (>100)
Tx = not really, supportive/sx mgmt
Poliomyelitis
Family = ?; Genus = ?
Epidem = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Picornaviridae; Genus = Eneterovirus; Species =
Epidem = eradicated from W hemisphere; still 1000-2000 cases/yr in: Afghanistan, India, Nigeria and Pakistan; epidemics used to occur in summer/fall; was assoc’d w/ development: both incr conc of poop + maybe hygiene hypothesis?
Pathogen w/ s/sx = fecal-oral route; 10-14 day incubation; only 1% develop sx
Four grades: 1) asymptomatic infection; 2) abortive (short course w/ h/a sore thr, n/v), 3) non-paralytic p-m (aseptic meningitis), 4) paralytic p-m
oropharynyx/small bowel—>bloodstream—>CNS (also retrograde axonal trans) perferring motor neurons in ant. horn of spinal cord + brain stem—>neuronal death —>paralysis (resp paralysis if also brain stem = “bulbar poliomyelitis”)
Dx = isolation (throat, stool, CSF)—>CPE—>specific anitsera; OR elev. Ab titer
Vaccines? = Salk (“IPV,” killed, given IM); Sabin (“OPV,” live-atten. given PO)
Tx = sx mgmt; resp. support; PT after
Coxsackie Viruses
Family = ?; Genus = ?
Epidem = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Picornaviridae; Genus = Enterovirus
Epidem = daycare (b/c F-to-O and stable in environment)
Pathogen w/ s/sx = F-to-O
TYPE A: Skim/Muc-Memb tropic
Herpangina (fev, sore thr, pharyngeal lesions); Hand, foot and mouth dz; Asep meningitis; Paralytic disease (rare)
TYPE B: Viscerotropic
pleurodynia (unilateral intercostal pain; possible orchitis); myocarditis; aseptic menin; paralytic dz (rare); possibly: Type I DM, chronic fatigue?
Dx = isol/culture, elev [Ab] or PCR of CSF
Vaccines? = None
Tx = None
ECHO VIRUSES
Family = ?; Genus = ?
Epidem = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = picornaviridae; Genus = enteroviruses; Species = Enteric Cytopathic Human Orphan viruses
Epidem = worldwide; daycare, again b/c non-env and therefore stable in the environment
Pathogen w/ s/sx = F-to-O trans; leading cause of aseptic meningitis; broad spec of dzs e.g. multiple rashes
Dx = isolation/cuture; sero tests not useful b/c >32 serotypes to date (of 67 total in enterovirus genus!)
No vaccine; no tx
Other Enteroviruses
Family = ?; Genus = ?
Epidem = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Picornavirus; Genus = Enteroviruses
Epidem = ?
Pathogen w/ s/sx =
EV 70 —> acute hemorrhagic (of bulbar) conjuctivitis
EV 71 —> H,F&M dz; leading cause of viral CNS dzs
EV 72 —> HAV
Dx = ?
No vaccines/tx
Rotaviruses
Family = ?; Genus = ?
Epidem = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Reoviridae; Genus = Rotavirus
Epidem = Endemic worldwide; peaks in winter; most deaths in poorer countries; children <2 y/o
Pathogen w/ s/sx = F-to-O trans; 2-day inc then gastroenteritis (n/v + diarrhea); dehydration —> death
Dx = usually clinical; radioimmunoassay or ELISA from stool sample
Vaccines? = yes, two orals now: Rotarix is live monovalent for more common U.S. serotype; Rotateq reassortment of surface Ags from 5 human serotypes on a live bovine strain
Tx = No antiviral; WASH YO HANDS
Norwalk virus
Family = ?; Genus = ?
Epidem = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Calciviridae; Genus = Norovirus
Epidem = cruise ships/nursing homes/camps, highly contagious; easily spread via food esp shell fish/salads
Pathogen w/ s/sx = F-to-O trans; gastroenteritis; incr susceptibility if O blood type
Dx = usu. clinical; PCR of stool available for Public health measures
Vaccines? = in development
Tx = none; hygiene, rehydration-
adenovirus
Family = ?; Genus = ?
Epidem/trans = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = adenviridae
Epidem/trans = f-to-o—most common for kiddos et leur familles; aerosol; direct inoculation of eye (e.g. with tonometer/fingers); common in military
Pathogen w/ s/sx = 3-10 incubation; persists in ADENOIDS, tonsils—> resp; pink eye (i.e. epidemic keratoconjunctivitis); gastroent.
Dx = cell culture, elev titer, serologic (hemagglutination inhibition and complement fixation)
Vaccines? = no
Tx = no
Influenza
Family = ?; Genus = ?
Epidem/trans —>what strains, how are they different? how do they mutate?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = orthomyxoviridae; Genus = e.g. Influezavirus A
EPIDEMIOLOGY AND STRAINS
3 strains:
A = worst
B = less severe, epidemics q3-6 yrs
C = NBD
MINOR EPIDEMICS (i.e. yearly) due to antigenic DRIFT (i.e. mutation w/in existing RNA segments, specifically H gene); we’ll have partial immunity to this from previous immunization/illnesses
MAJOR PANDEMICS due to antigenic SHIFT involving reassortment of animal and human influenza strains; must be an H-shift, even worse if there is concomitant N-shift; this will be a Novel H (and N) which means we will have NO immunity
TRANSMISISON: droplets and surface contamination
Pathogen w/ s/sx = even though locatlized infection in resp tract (i.e. usually no virema)—>systemic sx incl. f/c and myalgia from pro-inflammatory mediators; destroys cilia of resp tract
—can develop 2° viral pneumonia—>leads to bacterial pneumonia
Dx = rapid uses fluorescent Ab on throat swab specimen; compare acute and convalescent Ig levels
Vaccines = usually killed virus trivalent w/ 2 A strains and 1 B strain given IM
FluMist = polyvalent, live, attenuated —>induces IgA
new quadrivalent just out w/ 2 A and 2 B strains
Tx = neuraminidase inhibitors (e.g. osteltavir, zanamivir) for both A and B; amantadine and rimantidine—>only A and then only sub-set of As
RSV
Family = ?; Genus = ?
Epidem/trans —>Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Paramyxoviridae
Epidem/trans = trans like flu (direct droplets and indirect surfaces); outbreaks in winter; occurs worldwide and virtually everyone has been exposed by 3 y/o
Pathogen w/ s/sx = LOWER resp tract—>bronchiolitis and pneumonia more severe in infants—>hospitalization; can have immunopathogenic mech w/ maternal IgG forming immune complexes and injuring baby’s lungs
Dx = rapid antigen testing of resp secretions; CPE w/ giant, mulitnuc cells; RT-PCR; 4x rise in Abs
Vaccines? = no vaccine
Tx = inhaled ribavirin (unsure how well it works); maybe combine with hyperimmune Igs
Croup
Family = ?; Genus = ?
Epidem/trans = ?
Pathogen w/ s/sx = ?
Tx = ?
Family = Paramyxoviridae; (Genus = Respirovirus & Rubalavirus;) Species = Parainfluenza (most common cause; other viruses can cause similar syndrome)
Epi/trans—> first three years of life
Pathogenesis = “acute laryngo-tracheo-bronchitis” causing dyspnea and stridor
Tx = glucocorts w/ bad cases
SARS
Family = ?
Epidem / Trans = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Coronaviridae
Epidem/trans = human-to-human trans
Pathogen w/ s/sx = 1-3 days incubation; severe infection uncharacteristic of other coronaviruses; pneumonia w/ diffuse edema—>hypoxia; binds to ACE-2 which may play role in edema
Dx = PCR- and Ab-based tests used to dx SARS
No vaccine nor specific antiviral; ribavirin + steriods
Hepatitis A
Family = ?
Epidem = ?
Trans = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = picornaviridae
Epidem = overt dz less common in developing countries b/c nearly everyone seroconverts by age 5 and virus is mild chez les petits enfants; MAIS, dans les pays plus developés, il y a plus des adults immuno-naïve
Examples: 1) outdoor events w/o sanit, 2) raw shellfish contam w/ sewage; 3) within fam w/ small kid, 4) infected foodhandler, 5) imported contam food
Trans = F-to-O trans; blood if pt is viremic
Pathogen w/ s/sx = incub is 30 days; viremia—>liver—>anorexia, nausea, fever, jaundice elev. LFTs (e.g. AST); liver damage to cell lysis by replicating virions
There is no chronic stage
Dx = Anti-HAV-IgG and IgM sero assays
Vaccines? = killed IM vaccine
Tx = pooled Ig
Hepatitis B
Family = ?
Epidem = ?
Trans = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Hepadnaviridae
Epidem =
Trans = sexual, blood, perinatal, needles
Pathogen w/ s/sx = 70 incubation;
Has chronic phase in 5% of cases. —>liver carcinoma and chornic hepatitis
Dx = HB-Ags from serum
Vaccines? = Yes, inactivated subunit vaccine given IM (only contain antigenic subunits)
Tx = pooled IgG for infants of known-infected mothers
Give alpha-INF w/ lamivudine, a chain-terminating RT inhibitor from HIV txs past
Hepatitis C
Family = ?
Epidem = ?
Trans = ?
Pathogen w/ s/sx = ?
Dx = ?
Vaccines? = ?
Tx = ?
Family = Flaviviridae
Epidem
20,000,000 chronically infected worldwide; men > women; caucasianc > Afr. Amer.; Age > 40 y/o; increased risk factors: coinfection (HBV, HIV), EtOH, steatosis (fat droplets in liver)
Trans
Mostly injection drug users, also: sex, vertical, tatoos; needlestick and transfusion RARE
Pathogen w/ s/sx
60 day incub.; 70-80% become chronic hepatitis pts!
Dx
PCR test of HCV RNA
Vaccines?
no, mutates incredibly fast
Tx
chronic: alpha-INF (expensive and not very effacious); consider ribavirin; new: HCV protease inhibs (telaprevir and boceprevir) can be given with other two
Hepatitis D
Family = ?
Epidem = ?
Trans = ?
Pathogen w/ s/sx = ?
Family = n/a b/c not true virus (Deltavirus genus)
Epidem = only those with Hep B; break-outs among pops w/ high HBV prev
Trans = venereal, parenteral, perinatal
Pathogen w/ s/sx = acute onset; can be life-threatening
Hepatitis E
Family = ?
Epidem = ?
Trans = ?
Pathogen w/ s/sx = ?
non-env (+)ssRNA from Hepeviridae
trans = f-to-o
contam water/food
only in developing countries
20% mortality w/ preg women