Ribosomes and mechanism of translation Flashcards

1
Q

What subunits is a prokaryotic ribosome made up of?

A

70S: 50S + 30S

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2
Q

What subunits is a eukaryotic ribosome made up of?

A

80S: 60S + 40S

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3
Q

What is the weight of a prokaryotic ribosome?

A

2.3 x 10^6 daltons

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4
Q

What is the weight of a eukaryotic ribosome?

A

4.6 x 10^6 daltons

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5
Q

What percentage of the prokaryotic ribosome is RNA by mass?

A

65%

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6
Q

What percentage of the eukaryotic ribosome is RNA by mass?

A

60%

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7
Q

What subunits is a prokaryotic 50S subunit made up of?

A

23S RNA + 5S RNA

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8
Q

How many ‘L’ proteins does the prokaryotic 50S subunit have?

A

31

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9
Q

What subunit is a prokaryotic 30S subunit made up of?

A

16S RNA

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10
Q

How many ‘S’ proteins does the prokaryotic 30S subunit have?

A

21

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11
Q

What subunits is a eukaryotic 60S subunit made up of?

A

25S-28S RNA and 5.8S +5S RNA

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12
Q

What subunits is a eukaryotic 40S subunit made up of?

A

17S-18S RNA

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13
Q

How many ‘L’ proteins does the eukaryotic 60S subunit have?

A

45-50

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14
Q

How many ‘S’ proteins does the eukaryotic 40S subunit have?

A

~30

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15
Q

Are there many proteins at the subunit interface of ribosomes?

A

Very few

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16
Q

The 60S ribosome subunit has ‘extra’ what mainly on its back (non-interface) surface?

A

‘Extra’ proteins

17
Q

Where do protein-protein interactions occur in eukaryotic ribosomal subunits?

A

On the ‘outside’ of the subunits

18
Q

Where do protein-protein interactions occur in eukaryotic ribosomal subunits?

A

On the ‘outside’ of the subunits

19
Q

Many ribosomal proteins have bizarre structures that are quite unlike what?

A

Globular proteins

20
Q

Give an example of a protein that contains a bizarre structure in a ribosome

A

Protein L15

21
Q

What do the ribosomal proteins that contain bizarre structures act like?

A

Hairpins: they form extended scaffolds on which rRNA is supported

22
Q

What do the ribosomal proteins that contain bizarre structures act like?

A

Hairpins: they form extended scaffolds on which rRNA is supported

23
Q

Are the decoding and peptidyl transferase centre (PTC) on the same ribosomal subunit?

A

No

24
Q

What does tRNA bridge?

A

The ribosomal subunit interface (water-free zone)

25
Q

EF-Tu and EF-G are examples of what biological phenomenon?

A

Molecular mimicry

26
Q

What does RF1 recognise?

A

UAG and UAA

27
Q

What does RF2 recognise?

A

UAA and UGA

28
Q

What enzyme is associated with RF3?

A

GTPase

29
Q

What are the stop codons?

A

UAG, UAA, UGA

30
Q

What does the ribosome release factor (RRF) plus EF-G generate?

A

Free 70S subunit

31
Q

During the initiation of translation in bacteria, what binds to the 30S subunit?

A

Proteins bind

Act as anti-association factors

32
Q

What is the recognition called between the 30S subunit and mRNA during the initiation of translation in bacteria?

A

Shine-Dalgarno (S-D) recognition

33
Q

How many tRNAmet does E. coli have?

A
2:
Initiator tRNA (tRNAf) used at AUG or GUG - start codons
Ordinary tRNA used at internal AUG
34
Q

What initiates translation in bacteria?

A

Formyl-methionine

35
Q

What enzyme catalyses the reaction of met-tRNAf into fmet-tRNAf?

A

Transformylase