Retinoblastoma Flashcards

1
Q

What is retinoblastoma?

A
  • eye tumour
  • 40% hereditary with early onset with multiple tumours in both eyes
  • 60% sporadic with one tumour in one eye
  • Rb protein name comes from its involvement in restinoblastoma but it is found all over the body
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2
Q

What checkpoints through the cell cycle are there?

A
  • G1 checkpoints check for extracellular environment and DNA damage and is most important in cancer
  • S + G2 checkpoints check for incompletely replicated DNA
  • M checkpoint checks for correct chromosome attachment to mitotic spindles
  • once past G a cell is commited to the cell cycle unless killed
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3
Q

What can cause Rb to hault the cell cycle?

A
  • stresses such as hypoxia, DNA damage and destruction of the mitotic spindle
  • activates phosphatases which return Rb to a hyperphosphorylated state and halt the cell cycle
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4
Q

What 4 ways are cyclin dependent kinases regulated?

A
  • activated by cyclin binding
    complexes are then:
  • deactivated by phosphorylation
  • activated by dephosphorylation
  • inactivated by CDK inhibitors that bind cyclin CDK complexes and inhibit their kinase actvivity
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5
Q

How was the exact importance of Rb shown in mice?

A
  • Rb1 gene mutations cause embyronal death due to developmental issues
  • replication still occurred in early stages showing that Rb is not essential until differentiation occurs
    -Checkpoint proteins are therefore important for pause and exit of the cycle but not for the cycle itself
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6
Q

Name some molecular effectors of Rb activity

A

those involved in:
- development, mitochondrial biogenesis and chromatin modulation
- E2Fs are involved in cell cycle, cell death and cancer progrsesion

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7
Q

How does Rb change throughout the cell cycle

A
  • unphosphorylated at G0
  • monophosphorylated at G1
  • hyperphosphorylated at the R checkpoint and beyond
  • after exit from the M phase, phosphates are stripped off by protein phosphatase type 1 PP1
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8
Q

What was some evidence for Rb’s involvement in cancer?

A
  • Rb is mutated or deleted in many cancers
  • DNA tumour viruses recruit oncoproteins that disrupt growth by forming complexes with hypophosphorylated Rb
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9
Q

What are the pocket proteins?

A

Rb famiyl proteins
- Rb, p107 and p130

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10
Q

What is the structure of the pocket proteins?

A
  • N terminus
  • Large pocket contains A + B regions + the C-terminus
  • small pocket describes just A and B
  • E2F binds at the large pocket with most Rb interactions occuring at B
  • p107 and 130 also have a kinase inhibitor site at their N terminus and a cyclin binding site between A and B
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11
Q

Where do other proteins bind to and interact with pocket proteins?

A
  • in many different regions
  • mDm2 binds at the large pocket
  • cyclin D at the small pocket
  • DNMT1 at B
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12
Q

Describe p107 and p130

A
  • more similar to eachother than to Rb
  • more extensive sequence homology
  • shared cyclin binding and CDK inhibitory domains
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13
Q

Describe the phosphorylation that occurs to Rb during the cell cycle in more detail.

A
  • cyclin D CDK6 leads to Rb monophosphorylation in early G1and it is still active
  • Cyclin E CDK2 lead to Rb hypoerphosphorylation in late G1 to inactive Rb and allow cell cycle to continue
  • hyperphosphorylaton can only occur after mono
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14
Q

How can anti-mitogenic signals affect Rb and the cell cycle?

A
  • can return Rb to hypo or dephosphorylated active state through:
  • attenuation of cyclin expression
  • induction of CDK inhibitors
  • direct modification of pRb by phosphatases
  • cell cycle halted
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15
Q

Once through the restriction point of G1, how is Rb regulated?

A
  • kept inactive by cyclins A, B and E containing complexes
  • these are not sensitive to extracellular signals
  • guarantees the execution of transition from S to G2 to M
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16
Q

What about phosphorylation of p107 and p130 pocket proteins during the cell cycle?

A
  • p017 phosphorylated by CDK 2 from G1-G2
  • p130 + CDK2 are important in G0 when cells are withdrawn from the cell cycle
  • some overlap with Rb function but neither can replace Rb entirely
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17
Q

How does expression of pocket proteins change throughout the cell cycle?

A
  • p130 high at G0 and decreases during active cycling
  • pRb levels are constant
  • p170 levels are induce at entry to G1
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18
Q

How can Rb be attenuated in cancer?

A
  • deleted or mutated
  • increases in Rb phosphorylation or degradation
  • upstream effectors and viral proteins such as HPV E7 can inhibit all 3 pocket proteins
  • all of these can lead to Rb inactivation that is seen in most/all cancers
19
Q

How might an increase in Rb phosphorylatin occur in cancer?

A
  • amplification of cyclin D
  • loss of p16, p21 OR P27
  • CDK mutations and amplifications
20
Q

How might an increse in Rb degradation occur in cancer?

A
  • amplification of MDM2
21
Q

Brielfy, how do Rb and E2F regulate the cell cycle together?

A
  • active Rb binds E2F and inactivates it stopping cell cycle progression
  • hyperphosphorylation of Rb by cyclins and CDKs causes Rb to unbind E2F allowing it to be active
  • E2F can then switch on DNA synthesis genes and the cell cycle progresses
22
Q

What are the E2F proteins?

A

E2F 1, 2, 3a, 3b, 4 and 5 + more
- transcription factors
- DNA binding domain
- regulated by pocket proteins like Rb

23
Q

How are E2F proteins activated?

A
  • dimerisation domain allows them to form heterodimers with DP1+DP2
  • when active E2F is shown in a diagram DPI1/2 is also there just not shown
24
Q

How do Rb and other pocket proteins inactivate E2F proteins?

A

-transactivation domain at the C-terminus overlaps with the Rb binding domain
- if Rb is bound E2F cant act as a transcription factor
- E2F/DPI heterodimer is often already bound to its consensus sequence when Rb binds + can recruit HDACs to increase repression

25
Q

What is the role of E2Fs 1, 2 and 3?

A
  • activating E2Fs
  • activate genes at the G1/S transition to allow cell cycle entry and progression
26
Q

What is the role of E2Fs 4 + 5?

A
  • repressive E2Fs
  • repress E2F target gene expression
  • translocate into the nucleus when in complex with Rb proteins during G0/G1
27
Q

Why do E2F 4 + 5 only enter the nucleus when complexed with a pocket protein?

A

dont have their own nuclear localisation signal

28
Q

What are the roles of E2Fs 6, 7 + 8?

A
  • transcriptional repression
  • have no Rb binding site, act independently of the Rb family
29
Q

Besides being sequestered by Rb, how else can the E2F/DPI heterodimer be inactivated?

A

phosphorylation of DPI

30
Q

Which E2Fs primarily interact with which pocket proteins?

A
  • mammalian activating E2FFs with Rb
  • inactvating E2Fs with p107 or 130
31
Q

Describe the status of E2F/pocket protein complexes in the cell cycle

A
  • In G0, p130 is bound to E2F 4+5
  • in G1 RB binds 1,2 + 3
  • When Rb is inactivated, 1, 2 + 3 can bind and switch on transcription to allow cell cycle progression
32
Q

What kinds of genes are regulated by E2F?

A
  • DNA replication genes like DNA polymerase
  • CDK activity like cyclin D1
  • growth promoting genes like c-myc
  • mostly repressed in G0 and early G1 and activated at the G1/S boundary
33
Q

How is E2F function limited to the G1/S boundary?

A
  • cyclin A/CDK2 in teh S phase phosphorylate E2F causing its disassociation from promoters and its degradation
34
Q

Describe the positive feedback loop involved at the G1/S boundary

A
  • E2F/DPI switches on cyclin E
  • leads to hyperphosphorylation of Rb
  • also phosphorylated p27 leading to its degradation and stopping it from inhibiting cyclin E
35
Q

What is the role of viral oncoproteins in the cell cycle?

A
  • oncogenic viruses produce proteins that can inactivate Rb and allow infected cells to go through the cell cycle
  • also need to deregulate p53 to stop apoptosis
  • HPV 37 or adenovirus proteins
36
Q

How do we know that the G1 restriction point is so important in cancer?

A
  • at least 1 member of the cyclin D/CDK/p16/Rb pathway that controls it is deregulated in cancer
37
Q

What cellular processes, other than E2F are affected whtn Rb is lsot?

A
  • cell cycle exit
  • response to DNA damage
  • mitochondrial defects
  • epigenetic changes
  • many more all interconnected
38
Q

What is the general role of Rb in apoptosis?

A
  • regulates E2F function and acts to protect against apoptosis
39
Q

What is the threshold model of activatine E2F?s

A
  • contribute to a pool of E2F activity
  • once this reaches a certain level is triggers proliferation or apoptosis
  • too much E2F goes beyond proliferation, causes oncogenic stress and pushes the cells to apoptose
40
Q

How do Rb and p53 mutations work together?

A

inactivating Rb alone just leads to p53 activation and cell death
there is selective pressure to reduce apoptosis so p53 pathways are also frequently seen mutated alongside Rb

41
Q

How can Rb inactivation impact apoptosis?

A
  • E2F1 overexpression leads to upregulation of ARF-p53 pathway, direct p53 phosphprylation and increased levels of BH3.
    E2F1 can also inhibit survival signals though NFkB inhibtion and Bcl2 inhibition
42
Q

What are the two opposing roles of E2F activation?

A
  • can induce cell cycle progression through gene activation
  • can also induce apoptosis by repressing survival genes and pathways and activating p53 and other proapoptotic genes
43
Q

How might Rb be modified in cells permanently withdrawn from the cell cycle?

A

acetylation of pRb maintains is in a hypophosphorylated stateWh

44
Q

What kinds of cells might be permenantly withdrawn from the cell cycle?

A
  • neurons
  • skeletal or cardiac muscle cells