Research Methods and Tools Flashcards

1
Q

How would you define research?

A
  • Studious inquiry or examination; especially: investigation or experimentation aimed at the discovery and interpretation of facts, revision of accepted theories or laws in the light of new facts, or practical application of such new or revised theories or laws.
  • The collecting of information about a particular subject.
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2
Q

Constituents of research

A
  • Defining, redefining, and/or formalizing problems.
  • Formulating hypotheses.
  • Suggesting solutions or solution approaches.
  • Collecting and analyzing data.
  • Experimenting.
  • Deriving new knowledge and/or formulating new theories.
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3
Q

What is NOT research?

A
  1. playing with technology;
  2. developing code;
  3. deploying standard or commercial technology;
  4. doing what others have already done.
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4
Q

Why are you doing research?

A
  1. Meaningful and long-lasting contributions towards the advancement of mankind and society.
  2. Attain a higher level of understanding of fundamental concepts.
  3. Intellectual satisfaction provided by doing something innovative and creative.
  4. Enjoy the challenges of solving unsolved problems.
  5. Degrees, financial benefit, and respect all come along the way.
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5
Q

Different types of research:

A
  1. Descriptive: surveys, comparative and correlational methods.
  2. Analytical: analyze and critically evaluate information.
  3. Applied: address practical problems and solutions that can be implemented for near-term benefits.
  4. Fundamental: generalization and formulation of theories.
  5. Quantitative: numerical results are used to validate claims.
  6. Qualitative: comparative development of usage patterns and experiences.
  7. Conceptual: relies on abstract ideas or theories.
  8. Empirical: relies on experience and observations.
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6
Q

What is Computer Science?

A
  • The discipline of Computing is the systematic study of algorithmic processes that describe and transform information: their theory, analysis, design, efficiency,
    implementation, and application
  • Computer Science is the study of phenomena related to computers, information structures, and management of complexity.
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7
Q

what are Computer Science branches?

A

Theoretical Computer Science:
- Builds theories as logical systems with the aim of deriving/proving theorems.
- Design and analysis of algorithms.
- Understanding the limits of computation.
- Distillation of knowledge acquired through conceptualization, modeling, and analysis.

Empirical (Experimental) Computer Science:
- The field of inquiry is the nature of information processes.
- Used for theory testing and explanation, unearth new phenomena that need explanation and help derive theories from observation.

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8
Q

How to Select PhD topic?

A
  1. Understand your expertise and limitations.
  2. Focus first on breadth of knowledge; depth comes later.
  3. Be specific about the topic, but be flexible about the scope.
  4. The topic should be rich enough but also accessible.
  5. Be prepared to revisit the topic you selected, if needed.
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9
Q

How to build your foundations?

A
  • You should have or build a very strong background and foundations on the broad area of your topic.
  • You should have some ideas about the state of the art.
  • You should like and enjoy the chosen topic.
  • Choosing a new topic vs. an old topic.
  • You need to envision the future prospects of your intended topic (e.g., working on a standard that later is dropped)
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10
Q

How can you Expand your knowledge?

A
  • You should expand your breadth of knowledge on the selected topic.
  • Read the fundamentals on the topic to build up the foundations for your research.
  • These efforts will pay off in the long run, even if it does not seem so initially.
  • Feel open about broadening the scope of the topic as you build up on it.
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11
Q

Why do we need to read papers?

A
  • to cultivate knowledge of the area.
  • to learn about recent advances.
  • to avoid reinventing the wheel.
  • to place our work in the proper context (related work)

A careful selection of papers saves a lot of time because there are several must-read papers in every area, including “historical” papers and a lot of “garbage” around.

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12
Q

Three-pass approach for reading papers

A
  1. Quick scan (5-10 mins):
    - To decide whether the paper is worth reading at all.
    - Reduces significantly the number of papers to process further.
  2. Reading with greater care (1 hour):
    - Helps in grasping the content.
    - Helps to better understand the contributions of the paper.
  3. Detailed reading (4-5 hours, but may take much longer):
    - To fully understand the paper.
    - Helps in identifying open issues and ideas for future work.
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13
Q

Explain the three pass to read papers

A

Pass 1:
- Carefully read the title, abstract, and introduction.
- Read section and subsection headings, but ignore everything else.
- Read the conclusions.
- Glance over the references.
- After reading you should enable to answer these questions:
Category: What type of paper is it (experimental, system descr., …)?
Context: To which papers is it related? What bases were used?

Pass 2:
- Read with greater care, but ignore details (e.g., proofs).
- Identify areas of your interest.
- Identify results relevant to the scope of your topic.
- Scribble in the margin important points, thoughts, and questions.
- Mark relevant references for further reading.
- After reading you should be able to:
Grasp the content of the paper.
Summarize main contributions, with supporting evidence.

Pass 3:
- This is required to fully understand the paper, especially if you have to review it.
- This requires great attention to detail.
- Think about how you would present a particular idea.
- You can learn new techniques and good presentation style.
- Note down open problems and ideas for future work.

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14
Q

Where to publish your paper or research?

A

Publishers:
- reputation.
- professional societies.
- stay away from private commercial publishers (predatory publishing!).

Quality and metrics of journals and conferences:
- impact factor.
- citations, bibliometrics.
- accessibility to researchers.
- Conference ranking: http://valutazione.unibas.it/gii-grin-scie-rating/ (by GII+GRIN+SCIE)
- Journal ranking: https://www.scimagojr.com/ (based on Scopus database by Elsevier).

Electronic publishing.

Make your work available online.

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15
Q

Citations and impact factors (IF)

A
  • Citations quantify the impact of a paper.
  • The number of citations is a measure of how well known the paper is, and how significant the results are.
  • Impact factor (IF) is used mostly for journals and is defined as the average number of citations for its papers.
  • Impact factor is sometimes misleading (e.g., predatory publishers force citing papers in their journals).
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16
Q

Different types of papers

A

Different kinds of papers serve different purposes, and are directed at different audiences:
- Paper abstracts
- Extended abstracts
- Research papers
- Position papers
- Survey papers
- Magazine articles

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17
Q

Workshops, conferences, journals

A

In computer science, when we publish our original research, we often follow the 3-phase model:
1. one or more workshop papers with initial ideas and preliminary contributions.
2. one or more conference papers, each providing original, substantial results.
3. a journal paper, that consolidates, and expands the original research contributions.

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18
Q

Conference vs. journal publications

A

Refereed conference publications with a high value are a peculiarity of CS.

Conference rankings are being established, but are still controversial.

The number of conferences has increased dramatically, at the price of overall quality (Disadvantages of publishing in conferences) :
- Too many conferences (and journals) that accept low-quality papers.
- The reviewing load has increased, there is less time for reviewing, and reviews are shallow.
- Predatory conferences that accept everything without proper reviews.

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19
Q

From conference to journal paper

A

Different models are being adopted:

  1. Revision of the paper with 25%-30% new material.
    - Disadvantages: citation splitting, lag time.
  2. Journal first, with a paper published in a journal, and authors invited to present at the conference.
    - Becoming increasingly popular.
  3. Journal-integrated, where papers accepted in the conference review process are published in the journal, and presented at the conference.
    - Papers that need additional reviewing are transferred to the journal review process.
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20
Q

The scope of a paper

A

Key aspect: What to include and what not in a paper?
Typical questions to ask:
- Which results are the most surprising, original, and technically challenging?
- What might other researchers adopt in their work?
- Are the other outcomes independent/interesting enough to be published separately?
- What is the key background work that I need to discuss to explain my novel contribution?
- Which preliminary material should I include to make the results understandable?
- How much detail of the novel contribution should I include in the paper?

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21
Q

Choosing the right venue

A

The scope is largely determined by readership and venue.
Typical questions to ask:
- How relevant is the topic for the venue?
- How does my work measure against the standard for that venue?
- Are there page limits to consider? (There always are!!!)
- What is the background of the typical reader?
- Are proofs of theorems required/expected/desired?
- Is an experimental evaluation required?
- Is the deadline compatible with the work plan?
- When is the next deadline for an appropriate venue, if the upcoming deadline is missed?

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22
Q

Telling a story

A
  • An effective paper educates its readers.
  • It leads them from what they already know to new knowledge you want them to learn.
  • Hence, the body of a paper should have a logical flow that has the feel of a narrative:
    It is a walk through the ideas and outcomes, it should not explore all wrong attempts and unsuccessful paths. There should be a logical closure, where the hypotheses or claims presented in the paper are shown to be justified.
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23
Q

Developing the story

A

As a chain, the results and the background on which they build dictate a logical order for the presentation of the material (e.g., problem statement, previous solutions are bad our new solution is better).
- By specificity, suited for results divided into stages.
- By example, proceeding from a specific instance to the general framework.
- By complexity, proceeding from simpler to more complex cases.

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24
Q

Typical constituents of a paper

A
  1. Title and information about authors
  2. Abstract
  3. Introduction
  4. Body
  5. Related work
  6. Conclusions
  7. Bibliography
  8. Appendices
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25
Q

Title and information about authors

A
  • Papers begin with title and information about authors including name, affiliation, and address: Use always the same spelling for your name. Use a durable email address, but prefer your institutional address.
  • The title is very important. It is read by thousands of people. A paper with a bad title might not be found and read (Not too short or too generic, not too long or specific, but specific enough to differentiate it from similar work).
  • How to list the authors? whoever gave a substantial contribution to the research (contributed to the actual writing of the paper- proved a key result or carried out a key experiment- implemented specific software that is necessary), the Order of names is important.
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26
Q

Abstract

A
  • Is typically a single paragraph of 50-200 words.
  • Allows readers to judge the relevance of the paper to them.
  • Is a concise summary of the paper’s aims, scope, and conclusions.
  • Should be as short as possible while remaining clear and informative.
  • The more specific, the more interesting.
  • Use past tense, since it refers to work already done.
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27
Q

Introduction

A
  • Can be regarded as an expanded version of the abstract.
  • Should describe the paper’s topic, the problem being studied, references to key papers, approach to the solution, scope and limitations of the solution, and outcomes.
  • Explanation of the specific problem (difficulty, obstacle, challenge) to be solved.
  • Summary of how the solution was evaluated and what the outcomes of the evaluation were.
  • There needs to be enough detail to allow readers to decide whether or not to read further.
    AVOID: supporting evidence, unnecessary jargon, complex mathematics, in-depth discussion of the literature
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28
Q

Body

A
  1. Provides necessary (formal) background and terminology.
  2. Defines the hypothesis and major concepts.
  3. Explains the chain of reasoning that leads to the results.
    - Provides the details of central proofs.
    - Explains the experimental setup and summarizes the outcomes.
  4. States in detail and analyses the results of the research.
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29
Q

Related work

A

Most results are additions to existing knowledge.

A literature review is used to:
- describe existing knowledge,
- compare the new results to similar previously published results, and explain how the new results extend existing knowledge.

Where to place the literature review?
a) Early in a paper, to describe the context of the work:
might then be part of the introduction.
b) After the main body: allows for a detailed comparison between old work and new results.
c) Along the paper, where it is used:
background material in the introduction analysis of previous results, where the own results are presented.

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30
Q

Conclusions

A
  • Are used to draw together the topics discussed in the paper.
  • Should include a concise statement of the paper’s important results and an explanation of their significance.
  • Hence, write “Conclusions”, not “Conclusion”. If you have no conclusions to draw, write “Summary”
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31
Q

Appendices

A
  • bulky material that would otherwise interfere with the narrative flow of the paper (proofs, algorithms, etc.)
  • material that even interested readers do not need to refer to;
  • additional background material that not all readers may be familiar with.
32
Q

Bibliography

A

References serve three main purposes:
- Help demonstrate that work is new (supporting claims of originality).
- Demonstrate your knowledge of the research area (your reliability!).
- Are pointers to background reading.

Reference style
- Numbered References: [16,32,18]
- Named References: (Chen and Li 2005, Deutsch et at. 1997.

Formatting the bibliography
- Each entry should include enough detail to allow readers to find the paper
- Use a uniform format for conference and journal names.

33
Q

Structuring the writing process

A

1) The first draft
- In the first draft, you should concentrate on presenting a smooth flow of ideas in a logical structure.
- May contain text written freely, without particular regard to style, layout, or even punctuation.
- Describing the problem forces you to consider in depth the scope and nature of the research.

2) From draft to submission
- Prepare a skeleton, choosing what to include in the paper.
- Sketch the abstract and introduction, to fix scope and content.
- Choose the section titles first, since it forces you to consider carefully the paper structure.
- Sketch the content of each section with 20-200 words.
- At the end revise the abstract and introduction, to reflect the actual paper.
- The conclusions are usually the last part to be written.

3) File of notes

4) PhD thesis

5) A writing-up checklist

34
Q

What is the primary objective of the research method in computer science and give them a definition?

A
  • Research method: refers to how a particular research project is undertaken.
  • Research technique: refers to a specific means, approach, or tool-and-its-use, whereby data is gathered and analyzed, and inferences are drawn.
  • Research methodology: refers to the study of research methods.
35
Q

Briefly explain the Different research methods.

A
  • Exploratory research: Improve the basic knowledge of a concept and walk into the unknown realms of the subject, may conclude that a problem does not exist.
  • Constructive research: Find a new solution to a specific persisting problem that demands a form of validation: theoretical analysis or benchmark tests.
  • Empirical research: Based on the observation of some phenomenon, Empirical evidence can be analyzed quantitatively or qualitatively.
36
Q

Why do experiments in research?

A
  • Fill the gaps between theory and practice
  • Provide insights into the theory
  • Characterize the performance of worst-case
  • Go beyond simply reporting observations
37
Q

Draw the importance of experimental research methods to
improves the quality of research?

A

initial idea -> write and explain -> prove theorems -> implement prototype -> experimental evaluation -> initial idea

38
Q

give 3 goals of an Experiment

A
  • Reproducibility and correctness
  • Generality and efficiency
  • News worthiness
39
Q

How do we plan an experiment?

A
  • Check correctness/basic assumptions.
  • Learn the quirks of the datasets/algorithms/test environments.
  • Identify the most promising ideas and parameter configurations.
40
Q

What are the important factors and design points?

A
  • Choose the parameters and metrics that highlight differences.
  • To quickly explore factor ranges, use doubling experiments.
  • Pilot study to find the factors.
  • Run a full factorial design.
41
Q

Complete the Doubling experiments

A

The idea is to use a geometric progression to quickly cover the space of possible factor levels.

42
Q

A Full factorial design

A

1-For each factor, choose a finite set of levels
2-run a trial for each design point
3-Exponential in the number of factors

43
Q

Factor Reduction Techniques

A
  • Merge similar factors
  • Trace the behavior of your experiments: enables trial overloading
  • Convert some factors to noise parameters (Replace the explicit choice with a simple random distribution)
  • Fix some factors, thus limiting the scope of the experiment
  • Remove factors that have little influence on the performance
44
Q

Briefly discuss Benchmarks.

A

A benchmark is a standard test or set of tests used to compare alternatives. It consists of the following components:
- Motivating comparison
- Task sample
- Performance measures

45
Q

What are the advantages of standardized benchmarks?

A
  • Stronger consensus on the community’s research goals
  • Rapid dissemination of promising approaches
  • Greater collaboration between laboratories
  • More rigorous validation of research results
  • Faster technical progress
46
Q

Give me some of the benchmark suites:

A
  • TPC-ATM (database)
  • UCR Time Series Classification Archive
  • SPEC CPU2017 (CPU performance)
  • Calgary Corpus and Canterbury Corpus (text compression)
  • Penn treebank (NLP)
47
Q

Write The three ingredients of reproducibility and discuss
them.

A

Repeatability: (Same team, same experimental setup) a measure of the ability of the method to generate similar results for multiple preparations of the same sample. This
determination is carried out by a single analyst and varies only in the number of sample preparations.

Replicability: (Different team, same experimental setup) a measure of the likelihood that, having produced one result from an experiment, you can try the same experiment, with the same setup, and produce that same result. It’s a way for researchers to verify that their results are true and are not just chance artifacts.

Reproducibility: (Different team, different experimental setup) The measurement can be obtained with stated precision by a different team, a different measuring system, in a different location on multiple trials.

48
Q

What is SIGMOD Reproducibility?

A

SIGMOD Availability & Reproducibility has three goals:
- Highlight the impact of database research papers.
- Enable easy dissemination of research results.
- Enable easy sharing of code and experimentation set-ups.

49
Q

What are the main challenges when running an experimental evaluation?

A
  • Machine independence All of these challenges are related to
  • Reproducibility by design
  • Feedback loops by design
  • Economic execution
  • Versioning
50
Q

How to manage a data set?

A
  • Automate dataset download and preprocessing as much as possible
  • Make preprocessed datasets publicly available
  • Annotate datasets with meta-data (preprocessing parameters, ground truth values, etc.…)
  • For debugging, set up generators of small random testbeds
51
Q

What is a Research plan?

A

A structured narrative describing your research with regard to
- What [are you doing]?
- Why [are you doing it]?
- How [are you doing it]?

52
Q

What (is your research about)?

A

Ground the work in context:
- Literature review: an organic, informative, and critical essay organizing and critically discussing the state-of-the-art
- Properly highlight your contribution
- “Previous research has addressed two main themes.”
- “According to (REF), previous research has addressed two main themes”

Master your subject:
- Research epistemology: the theory of knowledge, with regard to its methods, validity, and scope. It distinguishes justified belief from opinion.
- Key theories and concepts
- Methodology, methods, techniques, tools, writing style

Cohesive narrative:
- All parts are to be logically and coherently connected to each other so that even not technical readers can follow your ideas.
- Accordingly, you must use linking words and phrases to join clauses, sentences, and paragraphs together. Linking words can be used for
* Adding information and giving examples
* Summarizing and drawing conclusions
* Sequencing ideas
* Giving a reason and giving a result
* Similarity or comparison
* Emphasis & Details & Suggestion

53
Q

Why (is your proposal important)?

A

Identify the research challenge:
- There is a gap and addressing it would contribute to Explicitly stating the contribution of your research to existing knowledge.
- There are antagonist proposals Describe them and state your unique contribution
- Nobody has looked at this specific space
* Why?
* Has anything recently changed to make this space more
relevant/accessible/important?

54
Q

How (will you do it)?

A
  • Methodology
  • Methods
  • Techniques
  • Expected results
  • Project Gantt – time and resource planning
  • Critique
  • Constant inquiry
55
Q

How: Systematic search for knowledge?

A
  • What distinguish scientific research from other forms of research is the emphasis on using integrated empirical and rational processes
  • gaining information through sensory experiences and reasoning
  • analyzing and interpreting the information through methods and theories
56
Q

What is the Research as a process of inquiry?

A

The essence of modern science is the way of thinking, the disciplined way in which questions are posed and answered.

It is the logical process and demands for evidence, and NOT the technologies, that lie at the Centre of science.

57
Q

What is Scientific research?

A

The structured and creative process of formulating specific questions and finding answers to understand a phenomenon better.

58
Q

Asking Questions to Make a Research Plan

A
  • A question is one side of an idea
  • On the other side there is an unknown (A POTENTIAL ANSWER)
  • Asking questions is creative – it is the exercise of curiosity
  • Asking good research questions requires the specification of answering methods
59
Q

Approach to questioning

A

(Clarity- Focus - Complexity- Feasibility)
- Disciplined – rigorous – scientific
- Researchers are pervasive skeptics; they constantly challenge existing accepted wisdom
- Maybe undesired
- Knowledge is always incomplete – it is always tentative
- Your Research Questions are likely to be modified/refined/sharpened in the future.

60
Q

What are the Scientific research Stages?

A
  1. Setting the context – What? And why?
  2. Posing a question – What?
  3. Developing procedures to answer the question - How
  4. Planning for and making appropriate intervention
  5. Rationally interpreting the intervention
  6. Proposing future research directions
61
Q

What is the project plan must haves?

A
  • Clear success criteria: Is the project good or bad?
  • Gantt chart (Time planning): Are all required activities planned?
  • Risk analysis: What can go wrong?
  • Contingency plan: How do I minimize risk?
62
Q

What is Gantt Chart?

A

Split your work into key tasks
- Literature review
- Learning (mandatory courses, winter/summer schools, conferences)
- Coding
- Testing
- Writing (workshops, conferences, journals, thesis)

Plan when and how these activities are going to happen.

63
Q

What are the Critical points you should focus on when you write your plan?

A

Time estimate:
- Did you book any holiday?
- Have you factored in training time?
- Do you have any buffer?

How many concurrent WPs do you have?:
- How well do you cope with parallel tasks?
- Are there any external contingencies you do not have control over?

Did you plan intense writing periods?
- Parallel tasks will be harmed.
- Your final thesis will be improved.

64
Q

What is (Scientific) Presentation?

A

A speech/talk in which a human delivers a new (scientific) achievement, result, idea, or piece of work to other humans (the audience).

65
Q

Why do we write a Presentation?

A

Presenting scientific work is the key to:
- Disseminate your achievements
- See reactions of other scientists, get feedback
- Find new perspectives and ideas
- Ultimately build a research network
- With similar + complementary approaches

66
Q

Types of Scientific Presentations

A
  • Conferences - Workshops:
  • Paper presentation/poster
  • Keynote
  • Tutorial
  • Seminars
  • Roundtables and Meetings
  • Project Meetings / Reviews
67
Q

Conference

A

Present an accepted paper during the conference
- Fixed time slot
- Q&A moment

Audience:
- Scope depends on the size of the conference
- Check the track, session, and program of your day

Presentation Formats (Standard format):
- 25+5 or 20+10 or 15+5 mins
- Session chair Coordinates the speech and checks time During Q&A: asks questions if nobody else does

Keynote Speech:
- Invited talk at a conference/workshop
- Target: senior scientists
- Goal: broadly discuss a research line, area, established results, open challenges

Tutorials:
Conference lecture Goal: instruct people about a research area, problem, approach, framework, system
Typical audience Students and Scientists working in related areas or interested in the area

68
Q

Workshops

A

Like conferences, but less formal environment
- Focused on discussion of ideas rather than presentation of well-established results

Audience: two possible cases
- Very focused (sub-area)
- Very broad (cross-fertilization)

69
Q

Seminars

A

Informal presentation of your work to another research group
- To establish possible collaborations
- To exchange ideas
- To help each other
Time: 30 minutes - 60 minutes including discussions

70
Q

Meetings with Industry

A

Typical goals:
- Transfer techniques/results from academia to industry
- Collect real experiences/data to validate research

71
Q

Project Meetings

A

Meetings with the other partners of a project consortium
- Informal setting
- Goal: update each other about the work done
- Discuss general project-related matters
- Plan what to do

72
Q

Starting Point in Presentations:

A

Presentations reflect the current state of the art
- Papers are old, journal papers are older

Delivering a presentation gives:
- visibility to the presented work and the presenter
- responsibility to the presenter

As scientists: exploit at best the combination of documents and presentations

General rule: in a presentation, everything must have a reason

73
Q

Presenting Scientific Work Advantage

A

Interaction:
- Q&A: The audience can drive the information
delivery
- Revise on the spot: a presenter can tune the
delivery on-the-fly
- Delivery for emphasis (verbal/non-verbal)

Support of many different aids
(audio/visual/demos)

74
Q

Presenting Scientific Work Disadvantages

A
  • Linear delivery: one chance to talk, one
    chance to hear! No undo/redo for the speaker and No possibility of catching up for the audience
  • Pace determined by the speaker
  • Success depends on the speaker, and
    influences how the content is received
  • Assembling the speaker and the whole
    audience (time/space)
75
Q

What are the Four Perspectives of presentations

A
  • Speech
  • Structure
  • Visual Aids
  • Delivery