regulation of transcription by cell signalling pathways Flashcards

1
Q

cell signalling

A

by hormones/ growth factors
or by stressors such as dna damage,oxygen sensing, infection eg

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2
Q

Steroid hormone receptor

A

roles in intercellular signalling

physiological affects;
growth
tissue fevlopment
homeostatic control

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3
Q

key features of steroid hormone

A

membrane permeable
enter cell
bind to a receptor
receptor is a TF
hormone acts as ligand

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4
Q

signaling pathways of GR-mediated transcriptional regulationb

A

glucocorticoids enter cell
GR dissociates from chaperone proteins and enters nucleus
GR dimerises with another GR in nucleus
modulates gene transcription via direct interaction with cis-DNa elements
cross talk with other dna bound transcription factors
interaction with both dna elements and TFs
resulting modification leads to altered protein expression

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5
Q

other steroid receptors

A

some can be nuclear and bind to dna but do not activate transcription in absence of ligand
can repress transcription
modulated by ligand binding
can form homo or hetero dimers

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6
Q

hormone induced cell responses by cAMP

A

cAMP can regulate transcription via phosphorylation of CREB protein by PKA
this allows transcription to be controlled by hormones and other factors that regulate cAMP production

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7
Q

what does cAMP/CREB regulate

A

growth factor dependent cell proliferation and survival
glucose homeo stasis
cell differentiation
neuronal survival memory formation and addiction

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8
Q

TGF beta family

A

peptide molecules that regulate cellular processes

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9
Q

TGF beta

A

located in ECM
part of latent complex
injury = release of tgf b and binding to tgf b receptor type 2
type 2 phosphoprylates type 1 into heteromceric complexes
serine/theonine kinase activity of activated complex phosphorylates smad 2 and 3 to bind smad 4 and move to nucleus to enhance gene expression

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10
Q

JAK-STAT signalling

A

ligand binds receptor
receptors dimerise and phosphorylates tyrosine kinases on each other
kinases phosphorylate receptor
STAT 1 and 2 bind to cell and get phosphorylated
they dissociate and dimerise each other
STATS move to nucles and bind to DNA

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11
Q

tumour hypoxia

A

low oxygen tension
increases with increasing distance from capillaries
activated genes involved in angiogenesis,tumour cell migration and metastasis

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12
Q

molecular basis of hypoxia

A

hypoxia induces multipls things such as new blood vessels,red blood cells and anaerobic glycolysis

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13
Q

what regulates all these genes

A

HIF
hypoxia induced factor

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14
Q

HIF

A

TF regulates hypoxia induced gene transcription
heterodimer - hif1a and hif1b subunit

hif2a

regulated by o2 and degraded in normoxia, stabilised in hypoxia

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15
Q

hif a binding hif b

A

hypoxia - hifa stabilised
nuclear translocation
dimer formation
transcriptional activity

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16
Q

Hif 1 regulation by post translational modification

A

normoxia - 3 PHDs in the presence of o2 and cofactors hydroxylate HIF
Recognition by con Hippel Lindau protein an E3 ligase which targets HIF for degredation
HYpoxia - PHDS inactive, HIF translocates to nucleus
acitvbated genes involved in angiogenesis, tumour cell migration, metastasis

17
Q

Regulation of HIF -1 by factor inhbiting HIF
FIH-1

A

FIH-1 inhbitis HIF at TAD

18
Q

cell signalling via growth factor pathways

A

Growth factor mediated pathways increase HIF protein synthesis in normoxia

RTK signalling increasesd
PI3K/AKT/mTOR pathway
Ras/MEK/ERK oathway

19
Q

kidney cancer

A

highly angiogenic

VHL is mutated in a lot of renal cell carcinoma
Loss of VHL function leads to expression of HIF 1 and 2

HIF2a is oncogeneic driver in Renal cell carcinoma

20
Q

Anti angiogenc therapy in renal cell cancer

A

Inhibiton of MTOR or other pathways for HIF
targeting VEGF or its receptor

21
Q

p53

A

tumour supressor
p53 low in unstressed cells
regulated by MDM2/HDM2 by binding to n terminal transactivational domain
and promoting p53 ubiquitination and degredation

22
Q

p53 function

A

regulates
DNA damage
ribosomal stress
oncogene activation
hypoxia
telomere erosion
apoptosis
cell-cycle arrest
DNA repair

23
Q

P53 structure

A

has multiple domains