Regulation of gene expression Flashcards

1
Q

Amount of protein is determined by the rate of (3)

A

transcription
translation
degradation of mRNA or protein

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2
Q

activity of a protein is determined by (2)

A

protein cleavage
protein modifications

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3
Q

A common way for cells to regulate gene expression

A

controll transcriptioin

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4
Q

transcription of a gene is off/low

A

absence of activator or presence of repressor

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5
Q

transcription is on/high

A

presence of activator/lack of repressor

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6
Q

transcription in prokaryotes

A

organize related genes into operons

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7
Q

transcription in eukaryotes

A

have shared regulatory sequences

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8
Q

operon

A

functionally related genes

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9
Q

what do operons produce

A

multiple proteins from a single mRNA transcript

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10
Q

inducible operon

A

turned off until the products of gene expression are needed

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11
Q

repressible operon

A

turned on until the products of gene expression aren’t needed

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12
Q

An famous example of an inducible operon

A

lac operon

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13
Q

When is the lac operon repressed

A

when lactose is absent

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14
Q

What type of operon is the trp operon

A

repressible

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15
Q

when is the trp repressor active

A

when tryptophan is bound

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16
Q

The gal operon is an inducible that contains genes necessayr for galactose metabolism What is not true about the gal operon

A

galactose binds to the operator

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17
Q

How are eukaryotic cells transcription regulated?

A

by proteins that bind to enhancers located in and around genes

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18
Q

what are enhancers

A

DNA sequences in the regulatory regiion of a gene that can increase transcription from a nearby promoter

19
Q

Enhancer-bindiing proteins promote what

A

transcription

20
Q

Location of enhancers

A

may be distant from the promoter

21
Q

mediator proteins

A

makes all the factors come together

22
Q

more transcription factors effect on producing gene

A

more gene produced

23
Q

Cell differentiation

A

process by which cells become specialized

24
Q

selective expression of different genes

A

can give rise to different cell types

25
situ hybridization
used to detect the presence and location of mRNA from one specific gene
26
microarrays allow for what
global analysis of gene expression
27
Single cell RNA-seq
can be used to characterize the transcriptome of complex tissues
28
RNA sequence reveals
gene expression varies even in seemingly homogenous tissues
29
Two histone modifications
acetylation and methylation
30
acetylation
transcriptional activation
31
methylation
transcriptional repression
32
DNA modification
cytosine methylation
33
cytosine methylation
transcriptional repression
34
nucleosome
packaging DNA unit
35
methylation of cytosines in
CpG islands represses transcription
36
epigenetic modifications
change chromatin structure
37
Environmental factors
affect DNA methylation and have effects on health
38
Alternative splicing
a form of differential gene expression
39
microRNAs
regulate eukaryotic gene expression by blocking translation or promoting mRNA degradatioin
40
three facts about miRNA
1. tissue and developmental stage specifific miRNA exprfession 2.more than 60% of genes regualted by miRNA 3. each miRNA can regulate multiple mRNA targets
41
microRNAs in plants
regulate gene expression
42
Long non-coding RNAs (lncRNA)
regulate gene expression such as guiding, scaffolding
43
postranslational mechanisms for regulating gene expression (5)
1. reversible modifications like phosphorylation 2. regulation of protein folding (chaperones) 3. interactions with small molecules like Ca2+ 4. proteolytic cleavage 5. ubiquitin-mediated protein degradation