Recombinant Proteins Flashcards
What are recombinant proteins?
Splicing of; 2 pieces of DNA stitched together (bringing together genetic material from multiple sources)
Why use recombinant proteins as therapeutics?
- Protein perform complex and highly specific functions; nor easily mimicked by chemical drugs
- Humans proteins can be produced from non-human sources via recombinant techniques
- Relatively cost effective and limitless supply
- Facilitates protein engineering to improve stability, yield, ADME properties
- Reduced possibility of pathogen contamination (e.g. prions, HIV)
- Reduced possibility of immune rejection/allergic reactions due to species differences or contaminants
- Circumvents religious objections to animal products e.g. porcine insulin
- More rapid clinical development and regulatory approval compared to small molecules
What are some clinical uses of recombinant proteins/biologicals?
- Replacing missing or defective protein e.g. in endocrine, metabolic disorders (insulin, growth hormone, clotting factors, metabolic enzymes)
- Enhance/augment existing pathways (interferons; MS, cytokines, erythropoietin; anaemia, HRT)
- Interfere with harmful molecules or proteins produced by the body (inhibitors of growth hormone receptors; acromegaly, TNFalpha blockers; psoriasis/RA, DNAse; cystic fibrosis, anti-clotting agents.
- Delivery of other proteins or drugs to a specific site/tissue (antibodies linked to cytocidal compounds selectively targeting cancer cells)
- Antiinfectives - antibiotics, antivirals (interferon α and γ, monoclonal Abs, vaccines)
- Eliminating other harmful foreign substances (anti-venoms, anti-toxins)
- Treat autoimmune diseases, inflammation, transplant rejection (anti-TNF-α; psoriasis, anti-rhesus immunoglobulin, interferon β; MS)
- Anti-cancer therapies (avastin, herceptin; breast cancer, rituximab; B-cell lymphoma)
- Promote tissues repair, regeneration (bone morphogenic proteins)
- Diagnostics/biomarkers of disease, infection, cancer, metabolic disorders (HIV, HPV, TB, PSA, GHRH, TSH, Glucagon)
How has insulin progressed to recombinant human insulin?
1922 - Porcine insulin used to treat DM
> But animal derived insulins (cow, horse, pig) caused allergic reactions; low purity
1978 - Human insulin produced in E. coli
1982 - Eli Lilly markets ‘humulin’
How are fast-acting insulins e.g. lispro/glulisine/aspart modified for their therapeutic use?
- They exist as monomeric forms; unable to form hexamers (when insulin binds zinc and clumps with other insulins)
- Alterations at C-terminus of B-chain (swap AAs)
- Lispro; Lys-Pro-Thr
- Glulisine; Pro-Glu-Thr
- OG Humulin; Pro-Lys-Thr
How does the long-acting insulin glargine have such an effect?
- Modified A and B chains
- Form microcrystals/other aggregates
- Slow rate of monomer release
- Arg-Arg added onto OG Pro-Lys-Thr
What is Gaucher’s disease and how is it treated?
- Rare congenital disorder of lipid metabolism
- Deficiency in β-glucocerebrosidase enzyme
- Lipids build up in macrophages
Symptoms: hepatomegaly, splenomegaly, bone lesions
Treatment: enzyme replacement therapy; infusion of the enzyme extracted from human placentas.
How did recombinant proteins change how Gaucher’s disease was treated? What does this result in?
- Initially required 50,000 placentas to treat ONE patient for a year
- Production of recombinant form Cerezyme made treatment feasible
- Arginine 495 is changed to histidine
- This results in addition of mannose sugar
- Mannose recognised by cell surface receptors enhancing uptake in macrophages
What is erythropoietin (EPO) and what can it be used to treat?
- Growth factor, stimulating erythrocyte (RBC) production
- Treats anaemia in CKD, and in IBD
How can EPO be modified and what advantages does this bring?
- Change of two AAs introduces 2 additional N-glycosylation sites
- Half-life normally 5 hours; becomes 3-fold longer
- This meant fewer injections were required
What can contribute to growth failures disorders that result in the under production/resistance to growth hormone (GH)?
How is it treated?
- CKD, growth hormone deficiency, Prader-Willi Syndrome, Turner syndrome
Treated with recombinant human growth hormone (GH) and insulin-like growth factor (IGF-1); daily injections.
How does GHRH affect GH etc. to lead to growth?
- Hypothalamus releases GHRH (Growth Hormone Releasing Hormone)
- This stimulates the pituitary, which then releases GH
- GH acts at the liver causing the production of IGF-1 (insulin-like growth factor)
- This stimulates long bone growth, encouraging processes such as metabolism of fats and CHO = cell growth
What is gigantism and how is it characterised?
- Symmetrical enlargement of the body; overgrowth of long bones, connective tissues, visceral organs
- Caused by excess GH/IGF-1 caused by benign pituitary tumours (adenomas)
What is the difference between gigantism and acromegaly?
- Gigantism = excess GH/IGF-1 in early life
- Acromegaly = excess secretion of GH/IGF-1 after the body has stopped growing
What characterises acromegaly and how can it be treated?
- Enlargement of bones in hands, feet, face
- Treated with somatostatin analogues, blocking GF production
What areas of biomedical research use recombinant proteins?
- Protein structure/function studies
- Antibody production
- Drug discovery
- Recombinant DNA techniques
- Stem cell technology
- Gene therapy
- Bioimaging
- Disease biomarkers
- Translational research
Define: Recombinant DNA.
- Fragments of DNA (or copy DNA) recombined to generate a synthetic molecule
- DNA from different species can be recombined
Define: Host/vector systems
- DNA of interest inserted into plasmid or viral vector
- Vector introduced into host cell/organism
- Vector contains a gene promoter functional in host organism
- Expression of recombinant proteins for medical use/reseach
Define: Recombinant proteins
- Proteins generated from recombinant DNA vectors
Define: Transgene
- Recombinant DNA that is introduced into the genome of another organism
Define: Genetic engineering
- Alteration of DNA sequences to change gene function or expression
- In vitro/in vivo methods to combine DNA sequences from different organisms
What is a GMO?
Genetically modified organism
What is DNA and how is it transcribed to RNA?
- Pair of antiparallel chains
- ATGC
- Adenine
- Thymine
- Guanine
- Cytosine
What is transcription?
The process of making a copy of the anti-sense DNA strand into a sense RNA strand
How are proteins made from RNA?
- Via tRNA in ribosomes
- Translation of RNA to protein
What are prokaryotes and what is their gene structure?
- Bacteria
DNA:
- PROMOTER; transcription start site for RNA polymerase to start synthesising RNA at
- AUG start codon for translation in ribosomes
- Open Reading Frame (ORF); (the Cistron/gene)
- Stop codon for translation in ribosomes
- TERMINATOR; transcription stop site for RNA polymerase
mRNA:
- Random regulatory region not translated e.g. attracting ribosomes (bit between Promoter and ORF from DNA?)
- ORF (Cistron)
- Random regulatory region
Protein:
- Linear sequence
- Displayed from N to C terminus
Describe mammalian gene structure.
dsDNA (double-stranded):
- Transcription Start Site (TSS)
- Introns (non-coding parts)
- Exons (protein coding parts)
- Transcription Termination
pre mRNA (primary transcript): - Whole gene transcribed inc. non-coding introns
mRNA (processed; capped and spliced):
- pre mRNA is processed down to much smaller size
- Introns removed by spliceosome
- 5’ end capped w/7-methyl Guanylate cap
- 3’ end cleaved and PolyA tail (adenine nucleotides) added (increases stability/prevents degradation)
- Untranslated regions at either end
- CDS/coding sequence in middle
- Primary transcript now processed to mRNA
What techniques can genetic engineers employ?
- Restriction/modification enzymes
- DNA ligase (stitching DNA together)
- Reverse transcriptase (make DNA copy from RNA)
- PCR
- DNA sequencing
- Plasmid/viral vectors
- Controlled expression systems