Receptors Flashcards

1
Q

What are the four different cellular responses to extracellular signals?

A
  1. survive
  2. divide
  3. differentiate
  4. die
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Define signal transduction.

A

Intracellular mechanism by which cells respond to changes in the extracellular environment.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Types of signal transduction.

A
  1. contact-dependent (ligand on signaling cell surface)
  2. paracrine signaling (most common)
  3. synaptic (type of paracrine. Cells not actually touching)
  4. endocrine (long distance, long term)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

List the types of first messengers.

A
  • amino acid derived
  • peptide hormones
  • cytokines
  • growth factors
  • fatty acid derived
  • steroid hormones
  • neurotransmitters
  • amino acids
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Describe how a neurotransmitter does not act directly on a muscle cell but still transduces its signal.

A
  1. acetylcholine activates nitric oxide receptor on endothelial cell, producing nitric oxide
  2. NO diffuses to muscle cell where it binds guanylyl cyclase to make cGMP, causing rapid relaxation of smooth muscle cell
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Describe divergent signaling pathways.

A

binding of the same first messenger to same or different receptor types on different cells, causing different cellular responses.

ex: acetylcholine causes decreased contraction in heart muscle cell, contraction in skeletal muscle cell, and secretion in salivary gland cell

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What does divergent signaling depend on?

A

the constituent subunits making up a receptor on the surface of a certain cell type.

ex: metabotropic glutamate receptor (mGluR) has many different subunits and different ones are presented on different cells.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Describe converging signaling pathways.

A

multiple ligand types, same receptor

ex: glucagon, LSH, ACTH, and FSH all stimulate adenylyl cyclase, causing generation of cAMp

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

If AC is maximally stimulated by one ligand-receptor class, what is the effect on other convergent ligands?

A

The other ligands will not be effective.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Describe the experimental evidence for convergent signaling.

A
  • adrenaline receptors on RBCs. Cells treated with NEM to turn of AC inside cells, so the cells are no longer responsive to adrenaline
  • these cells are fused with adrenal cortical cells with ACTH receptors with functional AC. Once fused, the cells are only responsive to ACTH, though adrenaline receptors are intact still.
  • several hours after fusion, the cells are responsive to both ACTH and adrenaline, meaning that the AC’s inside the cell have been redistributed and are activated by more than one first messenger.
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Why are cell surface receptors necessary for signal transfuction?

A
  • cell membranes are impermeable to ions and polar molecules
  • polar molecules, small or large, are 10,000x slower at diffusing through the membrane compared to water
  • K+ takes 280 hours to diffuse through the bilayer, but much faster in the cytoplasm
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

How can you tell if a protein is associated with the lipid bilayer?

A
  • primary structure - run of hydrophobic aa
  • secondary structure - alpha helices
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

How can you tell which parts of a protein are associated with the lipid bilayer?

A

hydropathy plots - looks at aa sequence

-hydrophobicity versus aa residue number

(+) values that get higher as residue is more hydrophobic

(-) values that get more negative as the residue is more polar

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

In a hydropathy plot, where are the polar residues located with respect to the membrane?

A

You cannot tell which side of the membrane these residues reside on.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

How can cell receptors be isolated/purified? Why do we want to isolate them?

A

We want to isolate novel cell receptors so we can determine their aa sequence and to know how they function.

  • detergent solubilization (polar region stabilizes polar residue of the protein, hydrophobic region stabilizes hydrophobic residues)
  • high salt (chaotropic solutions - disruption of hydrogen binding)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Which assay is used to determine the kinetics of ligand-receptor binding?

A

scatchard assay.. cells or membranes exposed to radioactive ligand. bound and free ligand are separated into fractions. unbound ligand is washed off, and amount bound to receptor is plotted as a function of the concentration of ligand added to the cell. The max amount of receptors bound is determined by the plateau of fluorescence.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

What does the plot of a scatchard plot tell us about ligand-receptor binding kinetics?

A

the slope tells us -1/Kd, The larger this value, the tighter the association of the ligand to the receptor.

18
Q

What receptor assay would be done to determine the second messenger responsible for transducing a signal?

A

biological response assay (uses isolated but intact organs)

19
Q

Describe receptor state terminology.

A

channels: open vs closed

non-channel receptors: “r” form is inactive, “R” form is active

20
Q

which forms of a receptor do agonist, antagonists, partial agonists, and inverse agonists bind to?

A

agonist: R (transduces a signal)
antagonist: both (does not transduce a signal)

partial agonist: both (can transduce a signal if it binds R. Cannot transduce if it binds r)

inverse agonist: r (cannot transduce)

21
Q

How do agonists and antagonists affect the entropy of a receptor? Conformational changes?

A

agonists decrease entropy, antagonists increase entropy.

agonists cause conformational change in the receptor to transduce a signal. Antagonists and inverse agonists cannot induce a conformational change, therefore cannot transduce a signal.

22
Q

Experiment to determine which side of the receptor a ligand binds to (extracellular vs intracellular)?

A

Cells are treated with extracellular protease trypsin to degrade any proteins on the cell surface. Then do mRNA assay of the downstream gene affected to measure ligand-receptor binding and compare to cells without trypsin treatment. If there is no binding, then can conclude that the receptor was on the cell surface.

23
Q

Compare ligand concentrations needed to bind to the receptor vs to elicit a cellular response.

A

less ligand is needed to cause biological activity compared to that needed for measuring binding kinetics

24
Q

How is a receptor defined?

A
  • saturability (binding must reach a plateau)
  • specificity
  • reversibility (must be able to remove ligand)
  • functional reconstitution (cell must be responsive to ligand)
25
Q

Experiment to determine whether receptor-effector coupling is diffuse or permanent.

A

can change membrane fluidity by adding cholesterol to make it less fluid. then measure the responsiveness of the effector to the receptor by measuring activity

e.g. can measure AC activation in adrenaline vs adenosine-responsive cells. activation decreases in adrenaline-responsive cells as fluidity decreases, suggesting that its AC effectors are diffuse in the cell. Adenosine-responsive cells have constant activty regardless of membrane fluidity, suggesting that the receptor and effector are physically coupled.

26
Q

List the classes of cell surface receptors.

A
  • G-protein linked
  • ion-channel linked
  • enzyme-linked
  • death receptors
27
Q

Which type of cell surface receptor is ionotropic?

A

ion channel-linked receptors

28
Q

What are the two types of ionotropic receptors?

A

those that bind the ligand on the outside of the cell and those that bind the ligand on the inside of the cell

29
Q

Which type of receptor is the acetylcholine receptor? Describe its structure.

A

ion channel-linked (ionotropic).

There is the protein portion on the outside and a gate in the middle keeping a pore closed. The alpha helices lining the pore are positively charged, because these channels move chloride ions into the cell

30
Q

Describe the N-methyl-D-aspartate receptor.

A

moves sodium into the cell and calcium out of the cell. Because these ions are positive, the protein lining the pore opening are negative.

31
Q

Give some examples of enzyme-linked receptors.

A
  • receptor tyrosine kinases
  • receptor serine-threonine kinases
  • receptor guanylyl cyclases
  • histidine kinase-associated receptors
  • receptor tyrosine phosphatases
32
Q

Describe receptor tyrosine kinases. How do they become active?

A

intracellular domain is conserved in all types and has same activity. extracellular domains vary because of differrent types of ligands. They must dimerize to be active. Dimerization occurs by ligands, often by a ligand that binds both monomers. The receptors can transduce their signal by autophosphorylation, in which each monomer phosphorylates the other monomer.

33
Q

What types of proteins are activated in response to PDGF receptor activation?

A

PDGF receptor is a receptor tyrosine kinase. It binds platelet-derived growth factor. It phosphorylates and activates PI3-kinase, GAPs, and phospholipase C.

34
Q

What is the role of death receptors?

A

Induce apoptosis

35
Q

Describe the structure and activation of death receptors.

A

Upon ligand binding, the receptor dimerizes. On the intracellular side, a scaffold forms called the death domain. This helps bring associated proteins that activate death-affecting enzymes.

36
Q

Describe the delta-notch receptor system.

A

the receptor protein is called the notch. The nonsoluble ligand is attached to the surface of the nerve cell and binds in a cell contact-dependent manner.

  • notch receptor first has a cleavage event while it is still bound to the golgi
  • once in the plasma membrane, notch receptor can bind to delta ligand.
  • binding to delta initiates a second cleavage event on the extracellular side of the receptor
  • this cleavage initiates a third cleavage on the intracellular side of the notch receptor, allowing the tail of the receptor to go to the nucleus and further transduce the signal.
37
Q

How are different classes of receptors defined?

A
  • second messenger
  • function
  • activity
38
Q

What are the structural features of the receptor classes?

A
  • dimerization
  • multiple subunits
  • multiple membrane-spanning domains
  • signaling complex
39
Q

How is a receptor turned off?

A

desensitization. At this point the receptor is no longer responsive to further stimulation. caused by arrestin recruitment.
- receptor sequestration in endosome and subsequent recycling
- receptor down-regulation (endosome fuses with lysosome)
- receptor inactivation
- inactivation of effector protein
- production of inhibitory protein

40
Q

Which first messengers bind intracellular receptors?

A

steroid-derived