Quiz 2 Material Flashcards
Define spectroscopy.
The study of the interaction (absorption &/or emission) of electromagnetic radiation with matter
How do spectroscopy methods differ?
-
Region of spectrum
- UV
- visible
- infrared
- microwave
- radio
-
Type of radiation-matter interactions
- Absorption
- Emission
-
What is analyzed
- Molecule
- Atom
Describe light as a wave. [5]
- Wavelength, λ → the distance between successive maxima
- Amplitude → magnitude of the electric vector at the wave maxima
- Frequency, v → # of occurrences per unit time e.g., cycles per second
- Wavenumber, ṽ → wavelengths per unit length
- Wavelength and frequency are related by the speed of light, which we treat as a constant, c = 3x108m/s
Describe waves of light & interference.
- Maximum constructive interference (a) waves are in phase → amplitude = 2A
- Interference (b) 90° out of phase → amplitude = 1.4A
- Minimum destructive interference (c ) → waves 180° out of phase → amplitude = 0
Describe light as wavelike particles.
What is photon flux?
Describe the properties of light. [8]
Describe the properties of light. [8]
Energy is proportional to frequency (and wavenumber)
True or False?
True.
Energy is inversely related to wavelength.
True or False?
True.
Energy is inversely related to frequency (and wavenumber).
True or False?
False.
Energy is proportional to frequency (and wavenumber).
Energy is proportional to wavelength.
True or False?
False.
Energy is inversely related to wavelength.
Describe the relationship between energy, frequency, and wavelength.
- Energy is proportional to frequency (and wavenumber).
- Energy is inversely related to wavelength.
Discuss the energy of visible light.
- Mostly food analysis focuses on ultraviolet, visible, and infrared.
Describe transitions used for quantization of energy. [4]
- A given transition corresponds to a certain energy.
- Transitions:
- Translational
- Rotational
- Vibrational
- Electronic
- A photon of a particular energy causes a given transition.
Describe how the internal energy of a molecule or atom varies.
- atoms and molecules exist predominantly in their ground state
- a species struck by a photon may absorb the photon
- the species energy is increased by an amount equal to the photon energy, hv
- the internal energy of a molecule or atom varies in a series of discrete steps
- “The set of available energy levels for any given atom or molecule will be distinct for that species.”
When increasing energy, what are the transitions that occur?
- Only electronic transitions occur when considering the transitions of atoms.
- When considering molecules, all three types of transitions are important.
What wavelength of light is associated with electronic transitions?
UV-VIS light (180 - 750nm)
What wavelength of light is associated with vibrational energy?
IR light (0.78 - 300μm)
What wavelength of light is associated with rotational energy?
Microwave light (0.75 - 3.75mm)
Describe the wavelength regions, spectroscopic methods, and associated transitions. [7]
Describe absorption of energy in spectroscopy.
- Energy from a photon of electromagnetic radiation is transferred to the molecule or atom.
- Molecule/atom goes from the ground state to an excited state.
- An absorption spectrum characteristic for a particular molecule/atom
Why do we see continuous spectra, and not discrete bands in spectroscopy?
Smearing
What is the source of nonbonding valence electrons?
N, O, S, P
What is the source of pi(bonding)-electrons?
Double, triple bonds
What is a pigment?
Molecules that absorb VIS light
UV-VIS light has enough energy to cause […].
Outer shell electronic transitions
Conjugation lowers excitation energy (longer wavelength).
True or False?
True.
- electron delocalization lowers the required excitation energy
- absorption shifts +30nm for each additional conjugated double bonds
- Generally a system of greater than or equal to 7 conjugated double bonds will absorb VIS (e.g., flavonoids and carotenoids)
Conjugation increases excitation energy (shorter wavelength).
True or False?
False.
- electron delocalization lowers the required excitation energy
- absorption shifts +30nm for each additional conjugated double bonds
- Generally a system of greater than or equal to 7 conjugated double bonds will absorb VIS (e.g., flavonoids and carotenoids)
Describe the UV absorption of proteins.
- Below 200nm, the backbone of the protein is being excited
- Higher wavelengths are due to the side chains of the protein being excited.
Describe the absorption of chlorophyll (a pigment; highly conjugated system).
- Pigments absorb in the visible region.
What is fluorescence?
Absorption + Emission = fluorescence
Fluorescence = radiative decay (emitted photon = lower E than absorbed photon)
Describe the population of states.
Boltzmann Distribution → the population of a state decreases exponentially with the energy of the state.
Which phenomena associated with light are most readily explained by considering the wave nature of light? [3]
- Interference, diffraction, and refraction.
- The phenomena is associated with light propagation → includes refraction, diffraction, and interferences, all of which are important in spectroscopy.
Which phenomena associated with light are most readily explained by the particle nature of light? Explain these phenomena based on your understanding of the quantum nature of electromagnetic radiation.
- Interaction of light with matter, which is the basis of absorption and emission spectroscopy
- Potential energy spacing between allowed internal energy levels are characteristic of a species (= qualitative ‘fingerprint’)
- The phenomena associated with the interaction of light with matter, absorption being the most important for spectroscopy.
- Experiments related to the photoelectric effect illustrate that the light is quantized. Absorption is a simple capture of this bundle of energy, which must match the energy differences in the molecule/atom.
What does it mean to say that the energy content of matter is quantized?
- Potential or internal energy of an atom or molecule does not vary in a continuous manner but rather in a series of discrete steps.
- The quantum nature of atoms and molecules puts limitations on the energy levels that are available to them.
- The energy levels of matter are not continuous. For any given matter there are specific energy levels in which it can reside. If plotted, the energy levels would have a digital type readout rather than an analogue type readout.
Molecular absorption of radiation in the UV-VIS range results in transitions between what types of energy levels?
Electronic energy levels
Higher energy levels compared to IR range.
Molecular absorption of radiation in the IR range results in transitions between what types of energy levels?
Vibrational energy levels
Lower energy level compared to UV-VIS.
How do the allowed energy levels of molecules differ from those of atoms? Answer with respect to the diagram.
- Atoms → only electronic transitions
- Molecules → all three transitions are relevant
- Molecules will have many more energy levels due to the vibrational and rotational energy levels that occur in multi-atom structures.
- Atoms will have only electronic levels. Within each electronic energy level, molecules will have their vibrational and rotational energy levels.
In fluorescence spectroscopy, why is the length of the emitted radiation longer than the wavelength of radiation used for excitation of the analyte?
- In most cases, only a fraction of the energy difference between the excited and ground states is lost in the emission process.
- The other fraction of excess energy is dissipated as heat during vibrational relaxation.
- The excited species undergoes vibrational energy relaxation down to the lowest vibrational energy level within the excited electronic state, and then undergoes a transition to the ground electronic state through the emission of a photon.
- The photon emitted will have an energy that equals the energy difference between the lowest vibrational level of the excited electronic state and the ground electronic state level it descends to.
- The fluorescing molecule may descend to any of the vibrational levels within the ground electronic state.
- The wavelength of the emitted light is longer because typically some of the energy associated with the absorbed light is dissipated as heat (vibrational relaxation) and thus, the emitted light is of lower energy. The lower energy associated with the photons of the emitted light means that the corresponding light waves are of longer wavelength
- E = hv = hc/wavelength
What are the wavelength limits of Ultraviolet?
10 - 380 nm
What are the wavelength limits of visible light?
380 - 750 nm
What types of spectroscopy can be used with ultraviolet?
Absorption
Emission
Fluorescence
What types of spectroscopy can be used with visible light?
Absorption
Emission
Fluorescence
What types of transitions in chemical systems with similar energies are there in UV-VIS?
Outer-shell electrons in atoms, bonding electrons in molecules.
What is the principle of UV-VIS spectroscopy?
What is an inconvenience?
What is an advantage?
- pass a beam of photons through a sample
- measure the amount of light that is transmitted (or absorbed)
- relate the %T (or %Abs) to [analyte]
- Inconvenience → T is NOT linear with concentration
- Advantage → A is linear with concentration (within limits)
How is transmittance, T calculated?
How is absorbance, A calculated?
What are assumptions associated with UV-VIS spectroscopy?
What is a solution to this problem?
A = log(P0/P) = alc
- Assumption → Attenuation of beam solely due to absorption by sample = not completely valid! (i.e., light scattering, light reflection)
- Solution → measure the light exiting a reference sample (e.g., cuvette + solution, no analyte); use this as P0; ‘zeroing’ the instrument
In UV-VIS spectroscopy, discuss deviations from Beer-Lambert Law [3].
-
Analyte concentration > 10mM
- Intermolecular distances decrease
- Crowding
- Electrostatic interactions
-
Chemical processes
- Reversible association/dissociation of molecules
- Ionization (unbuffered system)
-
Polychromatic light
- Absorptivity is defined at a specific wavelength (monochromatic light)
- Multiple wavelengths = different absorption
Describe sample preparation for UV-VIS spectroscopy.
- Homogenization and clarification (e.g., centrifuge, filter)
- Chemical modification → absorb at desirable wavelength range
- Reference/blank sample = similar preparation/modifications w/o analyte
- Sample cell:
- Quartz cuvette (UV, VIS)
- Plastic (UV-VIS), 23-900nm
- Fused silica (UV)
- Silicate glass (VIS)
- Plastic (VIS)
- Match the application (wavelength range) with the correct cuvette material)
Describe why wavelength selection is important in UV-VIS spectroscopy. [2]
Maximize sensitivity
Greater adherence to Beer’s Law (less variation in absorptivity)
Describe calibration of UV-VIS spectroscopy instruments.
- 0% transmittance → block the detector
- 100% transmittance → measure the reference cell (set as P0)
Describe calibration curves in UV-VIS spectroscopy.
- Linear → obey Beer’s Law
- Non-linear → due to concentration-dependent changes in chemistry of system (change in absorbance per unit change in concentration is not constant → due to limitations in instrument
Discuss relative error in UV-VIS spectroscopy.
- Get lower relative errors with measurements at intermediate transmittance (%T = 15-65%; A = 0.2-0.8)
- Relative errors will be larger outside this range.
Describe the light source & features in UV-VIS spectroscopy instrumentation.
Describe the wavelength isolator/dispersion element of a UV-VIS spectroscopy instrument.
Describe the typical phototube design of a UV-VIS detector.
Describe double-beam spectrometer in UV-VIS spectroscopy.
- Measure reference and sample simultaneously
- Minimize errors due to drift/light fluctuations
- But, also lowers the intensity (Beam sharing)
Which compounds absorb 200-800nm?
What compounds give fluorescence?
Describe properties of fluorescent molecules. [5]
- Generally molecules that fluoresce are highly conjugated systems.
- Properties include:
- Maximum excitation and maximum emission wavelengths
- Stokes shift (λEMISSION − λEXCITATION)
- Extinction coefficient
- Quantum yield (conversion of absorption → emission)
- Lifetime (duration of excited state)
Describe fluorescence spectroscopy instrumentation and its differences from UV-VIS absorption spectrophotometer.
- Two wavelength isolators (for excitation and emitted light)
- Detector is 90° with regard to light source
Which is more sensitive?
Fluorescence or UV-VIS absorption spectroscopy?
Fluorescence is 10-1000x more sensitive.
Compare cuvettes - absorption vs. fluorescence.
Describe fluorescence spectroscopy applied to concentration.
Describe fluorescence applied to protein unfolding.
Describe fluorescent dye-binding experiments.
- Exposed non-polar surface area → increase in fluorescence means that there is binding to the protein because there are some hydrophobic surfaces exposed
- Amyloid fibrils → increase in fluorescence due to dye binding to beta-sheet structures of the amyloid fibrils
Describe how fluorescence can be used to determine egg freshness.