qPCR Flashcards
How to evaluate PCR
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What is melting curve, CT- value
melting curve- Melting curve analysis is an assessment of the dissociation characteristics of double-stranded DNA during heating. As the temperature is raised, the double strand begins to dissociate leading to a rise in the absorbance intensity, hyperchromicity.
Ct value is the cycle number when the fluorescence of a PCR product can be detected above the background signal and corresponds to the number of cycles to reach a defined threshold.
Delta Ct corresponds to the difference between Ct of your gene of interest and Ctof your reference or housekeeping gene.
common reason for bad qPCR
Poor quality RNA. Selecting the detection chemistry. Not using a master mix and organizing your experiments. Skimping on controls. Not validating your reference gene.
what is PCR
Polymerase chain reaction is used to make millions of copies of target proteins
What is qPCR or Real-Time RT-PCR?
is used to assay gene expression by measuring cDNA targets when RNA is used as the starting material.