Proteins Flashcards
what is the driving force for hydrophobic attraction?
the driving force is the disruption of water molecules near the exposed surfaces of hydrophobic molecules.
why is the transfer of hydrocarbons from non-polar solvents to water not thermodynamically favourable?
the Gibbs free energy is positive.
what are the amino acids with hydrophobic groups?
glycine, alanine, proline, valine, phenylalanine, tryptophan, leucine, isoleucine, methionine
what is the Gibbs free energy for hydrophilic amino acids?
negative
what is the Gibbs free energy for hydrophobic amino acids?
positive
What is the shape of hydrophilic proteins?
they have an elongated or rod shape because the shape has a larger surface area to volume ratio, which enables many hydrophilic residues to be placed on the surface.
what is the shape of globular proteins?
a globular shape will minimize the surface area to volume ratio, enabling more residues to stay hidden in the protein interior.
what is protein solubility?
it is the percentage of the total amount of protein contained in a food material that can be extracted with water or a salt solution.
what are the factors that influence protein solubility?
hydrophobic interaction (protein-protein interactions) ionic interactions (protein-water)
what is ionic strength?
it is a measure of the total concentration of charge contributed by ions present in a solution.
what is salting in?
as the salt concentration in a protein solution increases, the additional counter ions more effectively shield the ionic charges of the protein molecule. this increased protein solubility with an increase in ionic strength.
what is salting-out?
at high salt concentration, the bulk of the solvent molecules solvate the ion in solution. therefore, there is not enough solvent to dissolve the protein molecules. the protein molecules will clump together and precipitate out of the solution.
what is the isoelectric point?
it is the point at which the protein have no charge.
why is there minimum solubility at the isoelectric pH?
this is mainly due to the lack of electrostatic repulsion, which promotes aggregation and precipitation via hydrophobic interaction.
at what pH are protein extractions carried out?
at pH 8-9 since most proteins are highly soluble at an alkaline pH.