principles in selection of antimicrobial therapy Flashcards

1
Q

aerobic gram-positive cocci

A

staphylococci (GPC in clusters)
-staphylococcus aureus - coagulase positive
-­S. epidermidis - coagulase negative
­-S. saprophyticus - coagulase negative
Streptococci (Lancefield, hemolysis pattern)
­-Streptococcus pneumoniae - GPC in pairs (diplococci)
-S. pyogenes - group A, B hemolytic
-S. agalactiae - group B hemolytic
-viridans streptococci - normal oral flora
Enterococci - GPC in pairs and chains
-enterococcis faecalis
-E. faecium - high prevalence of vancomycin resistance

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2
Q

alpha, beta, gamma hemolysis patterns

A

alpha - partial hemolysis
beta - complete hemolysis
gamma - no hemolysis

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3
Q

aerobic gram positive bacilli

A
non-spore-forming GPB
-listeria monocytogenes
-corynebacterium spp.
---C. diptheriae
---C. Jeikium
-Lactobacillus spp.
spore-forming GPB
-bacillus spp.
---B. cereus
---B. anthracis - causative agent in anrthrax
branching or filamentous GPB
-Nocardia spp. (N. asteroides)
-Erysipelothrix rhusiopathiae (rare)
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4
Q

aerobic gram-negative cocci and coccobacilli

A
cocci
-neisseria spp.
---N. gonorrhoeae
---N. miningitidis
coccobacilli
-moraxella catarrhalis
-haemophilus spp.
---H. influenzae
---H. parainfluenzae
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5
Q

aerobic gram-negative bacilli ***

A

enterobacteriaceae

  • Citrobacter (C. freundii, C. Koseri)
  • Enterobacter (E. aerogenes, E. cloacae)
  • Escherichia coli
  • Klebsiella (K. pneumoniae, K. oxytoca)
  • Morganella morganii
  • Proteus (P. mirabilis, P. vulgaris)
  • Providencia (P. rettgeri, P. stuartii)
  • Salmonella (S. enteritidis, S. typhi)
  • Serratia marcescens
  • Shigella dysenteriae
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6
Q

other aerobic gram-negative bacilli

A
  • aeromonas hydrophila
  • alcaligenes spp.
  • Acinetobacter baumannii
  • Bordetella spp.
  • Brucella spp.
  • Burkholderia cepacia
  • Campylobacter jejuni
  • Francisella tularensis
  • Helicobacter pylori
  • Pasturella multocida
  • Pseudomonas aerugnosa *
  • stenotrophomonas malkophilia
  • Vibrio cholerae
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7
Q

Lactose fermenters

A
CEEK
Citrobacter species
Escherichia coli
Enterobacter species
Klebsiella species
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8
Q

non-lactose fermenters

A
pseudomonas aeruginosa
acinetobacter species
stenotrophomonas maltphilia
burkholderia cepacia
proteus species
providencia species
serratia marcescens
morganella species
salmonella species
shigella species
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9
Q

anaerobic bacteria

A

gram positive cocci in chains
-microaerophilic streptococci
-peptostreptococcus spp. (P. anaerobius, P. intermedius, P. magnus)
gram positive bacilli
-non-spore forming: Propionibacterium acnes
-spore forming: Clostridium spp. (C. perfingens, C. tetani, C. difficile, C. botulinum)
-branching, filamentous: Actinomyces spp. (A. israelii)

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10
Q

anaerobic gram-negative bacilli

A

gram negative cocci
-Veillonella spp. (V. parvula)
gram negative bacilli
-Bacteroides spp. (B. fragilis, B. ovatus, B. distasonis, B. thetaiotaomicron) - common
-Prevotella spp. (P. melaninogenica, P. denticola, P. buccae, P. oralis) - oral
-Fusobacterium spp. (F. necroporum, F. nucleatum)

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11
Q

normal flora of the skin

A

diptheriods (i.e. Corynebacterium sp.)
staphylococci (esp. S. epidermidis)
Streptococci
P. acnes

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12
Q

Normal flora of the oropharynx (upper respiratory tract)

A
Haemophilus spp.
streptococci (virdans group)
diptherioids
Neisseria spp.
Oral anaerobes
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13
Q

Normal flora of the GI tract

A
Bacteroides spp.
Enterobacteriaceae
Enterococci
Fusobacterium spp.
Peptostreptococcus spp.
Clostridium spp.
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14
Q

Normal flora of the genital tract

A
Corynebacterium spp.
Enterobacteriaceae
Lactobacillus spp.
Mycoplasma spp.
Staphylococci
Streptococci
Anaerobes
Candida spp.
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15
Q

systematic approach for selection of antimicrobial agents

A

1) confirm the presence of infection: careful history and PE, s/sxs, predisposing factors
2) identification of the pathogen: collection of infected material, stains, serologies, culture and susceptibility testing
3) selection of empiric therapy: site of infection, likely pathogens, host factors, drug factors
4) de-escalate (directed therapy)
5) monitor therapeutic response: clinical assessment, laboratory tests, assessment of therapeutic failure

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16
Q

confirmation of infection

A

FEVER* - hallmark of infection
significant if oral temp over 38.0 C or 100.4 F
rectal temp generally 1 F higher; axillary temp generally 1 F lower
Non-infectious causes of fever (false positive) *
-malignancy, collagen vascular disease (autoimmune)
-Drug fever*: fever coincides temporarilly with administration of the offending agent and disappears promptly with w/d of agent; B-lactams, amphotericin, anticonvulsants, allopurinol, hydralazine, nitrofurantion, sulfonamides, phenothiazines
-blood transfusions
absence of fever in a patient with s/sxs consistent with an infection (false negative)
-antipyretics - discourage use during treatment, may mask poor therapeutic response
-corticosteroid therapy
-antimicrobial therapy (partial)
-overwhelming infection - BAD

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17
Q

systemic signs and symptoms of infection

A
fever
increase WBC count
chills, rigor
tachycardia (over 90 bpm)
tachypnea (over 20 bpm)
hypotension (SBP under 90 or MAP under 70)
mental status change - elderly
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18
Q

WBC count as s/sxs of infection

A
normal WBC 4500-10500
normal WBC differential
-granulocytes ("phils"):
---mature neutrophils: 50-70%
---immature neutophiles (bands): 0-5%
---eosinophils: 0-5%
---basophils: 0-2%
-agranulocytes:
---lymphocytes: 15-40%
---monocytes: 2-8%
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19
Q

leukocytosis as s/sxs of infection

A

leukocytosis -increased WBCs
bacterial infection - associated with increased neutrophils + immature neutrophils (bands) = left shift *
presence of bands indications an increased bone marrow response to infection
may be elevated due to non-infectious causes (leukemia, stress) or drug therapy (steroids, lithium)
absent in neutropenic host; blunted in elderly**
leukopenia (abnormally low WBC count) may be sign of an overwhelming infection; poor prognostic sign**

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20
Q

lymphocytosis as s/sx of infection

A

lymphocytosis - increase lymphocytes
-associated with viral, tuberculosis or fungal infections
-B-lymphocytes: proliferate into plasma cells which produce antibodies involved in humoral* immunity
-T-lymphocytes: involved in cell-mediated* immunity
—T-helper/inducer cells (CD4) - regulation of the immune system; help with antibody production and secrete lymphokines to help protect against viral infections and tumors
—T suppressor (CD8) - bind to and directly kill tumor cells; help with regulation of humoral and cell-mediated immunity
monocytosis - associated with tuberculosis or lymphoma
eosinophilia - associated with allergic reactions or protozoal/parasitic infections

21
Q

pain and inflammation as s/sx of infection

A

pain and inflammation: swelling, erythema, tenderness, purulent drainage, easily detected in superficial infections or infections of the bone/joint
inflammation in deep-seated intections (pneumonia, menegitis, UTI) - must examine tissues/fluids (sputum, CSF, urine)
may be absent in neutropenic patients (WBCs)
symptoms referable to specific organ system

22
Q

additional lab tests - erythrocyte sedimentation rate and C-reactive protein

A

ESR and CRP
elevated in presence of inflammatory process but does not confirm the presence of enfection
normal values:
-ESR: 0-15 mm/hr in males; 0-20 mm/hr in females
-CRP: 0-0.5 mg/L
often elevated in the presence of infection
serial measurements may be useful in assessing response to treatment of deep-seated infections(i.e. osteomyelitis, endocarditis)

23
Q

additional lab tests - procalcitonin

A

PCT
precursor of calcitonin, a calcium regulatory hormone
normal value: less than 0.05 mcg/L
more specific marker from bacterial infections that ESR or CRP
-released when macrophages exposed to bacteria and endotoxin, increases 3-12 hours after stimulation and declines over 24-72 hours, levels correlate to bacterial load and severity of illness
magnitude of PCT elevation may provide diagnostic information
-PCT over 10 - sepsis/systemic infection
-PCT 2-10 - suggects sepsis
-PCT 0.25-2 - other condition or localized infection
may be useful for assessing response to therapy and when to stop antibiotic therapy

24
Q

radiographic test

A

xrays
computed tomography (CT)
magnetic resonance imaging (MRI) - more sensitive in detecting soft tissue infections, acute osteomyelitis and CNS infections
nuclear imaging - bone scans, WBC-labeled scans, etc
echocardiograpy - TTE or TEE, useful to detect vegetations on heart valves (endocarditis)

25
factors predisposing to infection
``` alteration in normal flora disruption of natural barriers -skin/mucus membrane -cilia of respiratory tract - smoking -pH, motility and integrity of the GI tract age immunosuppression -malnutrition -underlying diseases (hereditary or acquired) -hormones (pregnancy, corticosteroids) -drugs (chemo) ```
26
identification of the pathogen
collect infected material for direct exam, culture and susceptibility testing -BEFORE* initiating antimicrobial therapy - could kill organism - exceptions? meningitis -aspiration of infected fluids (sputum, blood, urine, CSF, abscesses, bone, etc.) -must be properly obtained and promptly submitted to microbiology lab -MUST* avoid contamination (i.e. sputum with saliva) -contamination - introduction of an organism into the clinical specimen during sample collection or processsing direct examination: gram stain, ziehl-nielsen strain, india ink, KOH culture, susceptibilty testing, rapid diagnostic tests -aerobic, anaerobic cultures -blood cultures - collect 2 sets (aerobic and anaerobic) from different sites, 1 hour apart if possible -sputum, urine, CSF, etc isolation of an organism from a clinical specimen does not always represent the presence of infection and vice versa (neg. culture doesn't always mean no infection) colonization versus infection
27
colonization versus infection
colonization: -a potentially pathogenic organism is present at a body site but is not invading host tissues or eliciting a host immune response -example: isolation of P. aeruginosa from a sputum culture in a patient with a chronic tracheostomy but no fever, cough or infiltrate on CXR infection: -a pathogenic* organism is present at a body site and is damaging host tissues and eliciting host responses and symptoms consistent with infection -example: isolation of S. pneumoniae in the sputum of a patient with fever, SOB, cough, sputum production, and evidence of consolidation on CXR
28
immunologic and molecular methods of testing
antibody or antigen detection -advantage - rapid turnaround time with acceptable sensitivity and specificity -sensitivity* - positive result in the presence of disease/infection -specificity - negative result in the absence of disease/infection -primary methods - detection and quantification of antibodies directed against a specific pathogen or detection of components of pathogen -immunofluorescence, latex agglutination, ELISA detection of microorganisms -nucleic acid amplification -hybridization DNA probes
29
host factors
drug allergy or hx of ADR - SE vs allergy patient age, weight, sex -age and sex related differences in PK -obesity - increase antibiotic doses? -different bacteria in meningitis based on age pregnancy, lactation - teratogenicity, PK changes, excretion into breast milk? genetic or metabolic abnormalities - G6PD deficiency, acetylator status, abacavir - fatal hypersensitivity in pt s HLA-B*5701 (requires screening) renal or hepatic dysfxn - calculate CrCl for EVERY* patient, dose adjustment? toxicity?, augmented Cr clearance over 130 site of infection - can antibiotic get there and at what conc? concomitant drug therapy, nutritional supplements - drug-drug interactions, drug-food interactions concomitant disease states (CF, HIV, cancer) prior antibiotic use - may increase risk of resistant bacteria
30
timing of initiation of antimicrobial therapy
depends on the urgency of the situation, specific infection, and infection severity critically ill patients (septic shock, febrile neutropenia, bacterial meningitis) -initiate antibiotic therapy immediately after or concurrently with collection of diagnostic specimens -sepsis** - increased mortality with every hour delay in effect antibiotic therapy bacterial endocarditis, osteomyelitis** -withhold antibiotic therapy until multiple sets of blood cultures obtained in endocarditis -withhold antibiotic therapy until bone biopsy obtained in osteomyelitis
31
empiric vs directed therapy
empiric therapy: -initiation of broad-spectrum antimicrobial therapy BEFORE** pathogen identification and susceptibility results are known -may require multiple antibiotics -importance of selecting empiric antibiotics with in vitro activity against infecting pathogens - significant decrease in mortality directed or definitive therapy -after ID of pathogen and susceptibility results are known -de-escalate to agent with narrowest effective spectrum of activity** -IV to PO conversion (except: CNS infection, endocarditis)
32
empiric therapy should be based on:
knowledge of likely pathogens known to cause specific infections and severity of infection -knowledge of most likely pathogen from Hx and PE, gram stain results -body site involves (CSF, urine, blood, sputum) -location where infection began (comm., nursing home, hospital) anticipated antimicrobial susceptibility pattern -antibiogram* - summary susceptibility report in a given institutions -local patterns: city v hospital, hospital v specific care area -large scale studies from literature information from hx and PE -where did the infection begin? other people sick at home? -prior knowledge of colonization or infections -prior antimicrobial use -recent hospitalizations -work-related exposures -smoking, DM, COPD, HIV, CF -travel hx -pets
33
bactericidal vs bacteriostatic therapy
bactericial* - kill the organism by acting on the cell wall (B lactams), cell membrane (daptomycin) or bacterial DNA (fluoroquinolones) bacteriostatic* - inhibit bacterial replication without killing the organism by inhibiting protein synthesis (macrolides, tetracyclines) - immune system can then kill not always a clear distincation - some bactericial drugs may be static against some organisms and vice versa bactericidal therapy required** in certain infections (meningitis - no host defense, endocarditis, osteomyelitis, immunocompromised hosts)
34
Is combo therapy needed? 3 main reasons for it
broaden spectrum coverage for empiric therapy in polymicrobial infections or infections potentially caused by organisms not adequately covered by 1 agent achieve synergistic bactericidal activity against a pathogen to improve outcomes prevent emergence of resistance
35
disadvantages of combo therapy
increased cost greater risk of toxicity superinfection with resistant bacteria antagonism
36
criteria for selecting antimicrobial therapy
efficacy, in vitro microbiologic activity, PK, PD, AEs, drug interactions, cost
37
selecting antimicrobial therapy - efficacy
clinical (cure rate) and bacteriologic (eradication rate) efficacy FDA-approved and non-approved indications problems with clinical trials: -lack of comparative trials -extremely ill patients excluded -small sample size -infrequent pathogen isolation at baseline -exclusion of resistant orgainsms
38
selecting antimicrobial therapy - in vitro activity
spectrum of activity* susceptibility tests - MIC, Disc, Etest resistance trends and mechanisms - enzymatic activation (B-lactamases), altered target site, decreased entry of drug into organism
39
selecting antimicrobial therapy - PK
Absorption - may be impaired by disease state, surgery, drug therapy Distribution - conc in bloodstream, conc at site of infection, protein binding, tissue conc do not always correlate with efficacy Metabolism Elimination - biliary and renal - glomerular filtration or tubular secretions tissue distribution -preferred: microdialysis (measure ECF conc) -tissue samples collected, pulverized, weighed, drug extracted and conc determined -tissue conc = (conc in supernatant) x volume of supernatant / weight of tissue -tissue conc represent the mean extracellular and intracellular conc
40
selecting antimicrobial therapy PD
the study of the biochemical and physiological effects of drgs and their MOA, including correlation of drug actions and effects with the drug conc in vitro effects - conc dependent bactericidal activity, time dependent bactericial activity in vivo effects -time above MIS - B-lactams -AUC/MIC - FQs, vanc, macrolides, linezolid -peak/MIC or Cmax/MIC - predicts outcomes for AGs
41
selecting antimicrobial therapy AEs
risk/benefit analysis problems w pre-marketing date - small sample size for AEs with low incidence of occurance -trovafloxacin - 140 cases of severe hepatotoxicity in 2.5 million patients (0.056%) problems w post-marketing data -underreporting -difficult to determine causality due to incomplete information -affected by length of time drug has been on market, publication bias, marketing trends
42
selecting antimicrobial therapy drug-drug interactions and drug-food interactions
reported in literature predicted based on known effects of the drug potential mechanisms: effects on protein binding, induction or inhibition of cytochrome P450 isoenzymes, complexation
43
selecting antimicrobial therapy cost
acquisition costs - least useful, most used administrative costs - supplies, personnel, storage/inventory monitoring costs - TDM, lab tests cost of toxicity - extended length of stay, additional treatment costs cost of poor clinical response total cost of care
44
criteria for selecting antimicrobial therapy
drugs of choice: guidelines, not rules common misuse(s) of antibiotics: -prolonged empiric therapy with no clear evidence of infection -treatment of a positive culture in the absence of infection -failure to narrow empiric therapy when pathogen is identified -prolonged prophylactic therapy -excessive use of certain antimicrobial agents
45
monitoring clinical response
clinical assessment - hows the patient doing?*** - PE - resolution of s/sxs of infection - non-invasive techniques (xray, scans) - AEs? - evaluate route of administration daily - switch to oral therapy
46
criteria to switch to oral therapy
``` overall clinical improvement lack of fever for 8-24 hours decreasing WBC count functioning GI tract duration of treatment: not well defined, individualize based on clinical response, recent emphasis on shorter courses of therapy ```
47
laboratory test to monitor clinical response
culture and susceptibility reults -narrowest effective spectrum of activity based on results -repest cultures to document eradication of the pathogen WBC, differential therapeutic drug monitoring
48
assessment of clinical features
``` re-evaluate therapy after 2-3 days due to incorrect diagnosis? due to antibiotic selection? -wrong drug/dose/route -enhanced drug clearance -drug interactions due to host factors? -immunosuppression -foreign bodies -abscess requiring surgical drainage due to microorganism? -resistance? -emergence of resistance -mixed (polymicrobial) infection due to lab error? -incorrect identification of pathogen -error in susceptibility test results ```