Population genetics Flashcards

lecture 14 and 15 week 7

1
Q

What is population genetics

A

population genetics is the study of the genetic variation in a population, and the evolutionary factors that explain this variation

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2
Q

What are evolutionary processes

A

evolution: a change in allele and/or genotype frequency over time

evolutionary processes included mutation and recombination, natural selection, gene flow, genetic drift and non-random mating

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3
Q

What is the Hardy-Weinberg equilibrium

A
  • describes situations in which allele and genotype frequencies do not change
  • based on Mendelian genetics but at a population level
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4
Q

What are the assumptions of the Hardy-Weinberg equilibrium

A
  • no selection
  • no migration
  • no mutation
  • large population size (no genetic drift)
  • random mating occurs

no evolution occurs

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5
Q

Example of Hardy-Weinberg equation
(need to use known genotype so normally recessive)

A

In the UK, 1 in 2500 babies are born with CF. What is the frequency of heterozygous carriers in the population

q squared = homozygous recessive with CF
1/2500
q = root of 1/2500 = 0.02

p + q =1
p = 1 - 0.02 = 0.98

p2 + 2pq + q2 = 1
2pq = 1 - 0.964 - 0.0004 = 0.0392

frequency of heterozygous carriers of CF is 0/0392

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6
Q

What are mutations

A

mutations are needed in order for evolution to occur

  • source of new alleles and genetic variation
  • provides ‘raw material’ for other evolutionary forces to act on
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7
Q

What is natural selection

A

variation in average reproductive success among phenotype

-based on overproduction in natural phenotypes
- individuals compete for resources, phenotypic variation occurs within the population and some phenotypes may have better chance of reproducing than others

  • evolution occurs if phenotype with different reproductive success has a genetic basis

fitness: measure of the relative reproductive success of a genotype
adaptation: a consequence of selection - prevalent or maintained in a population because of natural selection for that function

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8
Q

What are the different types of selection

A

-positive selection
- negative selection
- balancing selection

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9
Q

What is positive selection

A

natural selection that increases the frequency of a favourite allele

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10
Q

What is negative selection

A

natural selection that decreases the frequency of a deleterious allele

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11
Q

What is balancing selection

A

natural selection that acts to maintain two or more alleles in a population
eg. sickle cell anaemia
heterozygote advantage: AA vulnerable to malaria, SS affected by sickle cell anaemia
- S and A alleles are maintained in the population at intermediate frequencies in regions of malaria

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12
Q

What are the different types of selection that effect a particular trait

A
  • stabilising selection
  • directional selection
  • disruptive selection
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13
Q

What is stabilising selection

A

maintain the status quo and acts against extremes
eg. babies size at birth

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14
Q

What is directional selection

A

directional selection leads to a change in trait over time

eg. a drought occurred and only plants with large seeds survived
- birds with a bigger beak were then more likely to survive and the population changed so birds had a bigger beak size

artificial selection is where humans choose a trait which drives selection

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15
Q

What is disruptive selection

A

operates in favour of extremes and against intermediate forms
eg. evolution of two distinct populations of apple
- maggot flies in North America after apples were introduced from Europe

  • this can lead to the formation of new species
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16
Q

What is sexual selection

A

sexual selection promotes traits that increase an individuals access to reproductive opportunities

intersexual selection: members of one sex compete for the attention of another sex
intrasexual selection: members of one sex compete for access to the other sex

17
Q

What is gene flow

A
  • the movement of alleles from one population to another (caused by migration)
    -increases genetic diversity in the receiving population but makes populations more similar to each other
  • can be maladaptive
18
Q

What is genetic drift

A

random changes in allele frequency from generation to generation (effect is stronger on smaller populations)

  • in extreme cases a population bottleneck occur where there is a catastrophic reduction in population, this causes a loss of genetic variation

founder effect: a few individuals of a population starts a new population
- leads to a loss of variation

19
Q

What is non-random mating

A

assortative mating: individual with the SAME genome more likely to mate than individuals with different genotypes

disassortative mating: individuals more likely to mate with individuals of a DIFFERENT genotype

non-random mating leads to a change of genotype frequencies, but not a change in allele frequencies

assortative mating: excess of homozygotes (inbreeding)

disassortative mating: excess of heterozygotes