Plant Pathology terms Flashcards
abaxial
directed away from the stem of a plant; pertaining to the lower surface of a leaf (contrasts with adaxial)
abiotic
pertaining to the absence of life; abiotic diseases are not caused by living organisms (pathogens), but by chemical and physical factors. (see also noninfectious) (contrasts with biotic, infectious)
abscission
the shedding of leaves or other plant parts as the result of physical weakness in a specialized layer of cells (the abscission layer) that develops at the base of the structure
acute
pertaining to symptoms that develop suddenly (contrasts with chronic)
acute toxicity
the ability of a single dose of a compound to poison (contrasts with chronic toxicity)
adaxial
directed toward the stem of a plant; pertaining to the upper surface of a leaf (contrasts with abaxial)
adpressed
closely flattened down or pressed against a surface; appressed
agar
a gelatinlike material derived from algae and used to solidify liquid culture media; term also applied to the medium itself
aggressiveness
the relative ability of a plant pathogen to colonize and cause damage to plants (see also virulence)
allelopathy (adj. allelopathic)
the ability of one species to inhibit or prevent the growth of another species through the production of toxic substance(s
alternate host
one of two kinds of plant required by a heteroecious rust fungus to complete its life cycle; sometimes used as a general term for the aecial host, or for the economically less important host (see also: aecial host and telial host)
alternative host
a plant other than the main host that a parasite can colonize; alternative hosts are not required for completion of the developmental cycle of the parasite
alternation of generations
a reproductive cycle in which a haploid phase alternates with a diploid phase
ammonification
the conversion of organic matter during decay by bacteria, fungi, and some other organisms into ammonia and ultimately ammonium, NH4, which can be absorbed by plants
anastomosis
the fusion between branches of the same or different structures (e.g. hyphae) to make a network
annual
a plant that completes its life cycle and dies within one year (contrasts with biennial, perennial)
antagonism
a general term for interference between organisms that may include antibiosis or competition for nutrients or space; action of two or more pesticides that reduces the effectiveness of one or all (contrasts with synergism)
apex
the tip of a root or shoot, containing the apical meristem
appressed
closely flattened down or pressed against a surface; adpressed
arable
able to be cultivated for agriculture
aseptate
having no cross walls; lacking septa (see also nonseptate; coenocytic) (contrasts with septate)
autotroph
an organism that synthesizes its nutritive substances from inorganic molecules; e.g., plants capable of photosynthesis (contrasts with heterotroph)
auxin
a plant hormone (growth regulator) influencing growth through cell elongation
avirulence (avr) gene
a gene in a pathogen that causes the pathogen to elicit an incompatible (defense) response in a resistant host plant, and may enhance pathogen virulence in a susceptible host plant. The outcome of the interaction of an avirulence gene product with its corresponding plant resistance (R) gene product is usually a hypersensitive reaction
avirulent
unable to cause disease (see also nonpathogenic) (contrasts with virulent)
avoidance
a principle of plant disease control in which plants are grown at times or locations where the pathogen is inactive or not present
axenic
a culture in the absence of living bacteria or other organisms; pure culture
axillary bud
a bud that develops in the axil of a leaf (see also lateral bud)
biennial
a plant that produces seed and dies at the end of its second year of growth (contrasts with annual, perennial)
binary fission
a type of asexual reproduction in which two cells, usually of similar size and shape, are formed by the growth and division of one cell
binucleate
having two nuclei
bioassay
any test (assay) using a living organism
biocide
a compound toxic to all forms of life
biological control
the exploitation by humans of the natural competition, parasitism and/or antagonism of organisms for management of pests and pathogens (see also biocontrol)
biotic
relating to life, as disease caused by living organisms (see also infectious) (contrasts with abiotic, noninfectious)
biotroph
an organism that can live and multiply only on another living organism (see also obligate parasite) contrasts with necrotroph)
blight
a sudden, severe, and extensive spotting, discoloration, wilting, or destruction of leaves, flowers, stems, or entire plants
breaking
a disease symptom, usually caused by a virus, involving addition or loss of flower color to create a variegated pattern. (see also flower break)
breeding line
a plant strain used in a plant breeding program and usually containing one or more desirable agronomic or breeding characteristics
brown rot (of wood)
a wood decay resulting from selective removal of cellulose and hemicellulose, leaving a brown amorphous residue that usually cracks into cubical blocks and consists largely of slightly modified lignin (contrasts with white rot)
callose
an amorphous, hardened carbohydrate constituent of plant cell walls, commonly developing upon injury
callus
the specialized tissues that form over a wound or cut in a plant; cork cambium may form, and the cells produced will gradually seal the wound
canker
a plant disease characterized (in woody plants) by the death of cambium tissue and loss and/or malformation of bark, or (in non-woody plants) by the formation of sharply delineated, dry, necrotic, localized lesions on the stem; the term canker also may be used to refer to the lesion itself, particularly in woody plants
capsid
the protective layer of protein surrounding the nucleic acid core of a virus; the protein molecules which make up this layer (see also coat protein)
capsule
the gel-like material surrounding a bacterial cell
carpel
the ovule-bearing structure of a flower in angiosperm she ovule-bearing structure of a flower in angiosperm
causal agent
an organism or agent that incites and governs disease or injury
chasmothecium
the ascocarp of powdery mildew fungi; it has no natural opening at maturity, but opens by the rupturing of its wall (see also cleistothecium)
chemotaxis
the movement or growth of an organism in response to changing concentration of a chemical stimulus, often in relation to food or for mating; chemotropism
chemotherapy
a treatment of plant disease with chemicals (e.g. antibiotics or fungicides) absorbed and translocated internally
chitin
the complex polysaccharide carbohydrate in fungal cell walls, animal exoskeletons, and nematode egg shells
chlamydospore
a thick-walled or double-walled asexual resting spore formed from hyphal cells (terminal or intercalary) or by transformation of conidial cells that can function as an overwintering stage
chloroplast
a disklike organelle containing chlorophyll in which photosynthesis occurs in the cells of green plants
chlorosis
the failure of chlorophyll development, caused by disease or a nutritional disturbance; fading of green plant color to light green, yellow, or white
circulative transmission
a type of virus transmission characterized by a long period of acquisition of the virus by a vector (typically an insect), a latent period of several hours before the vector is able to transmit the virus, and retention of the virus by the vector for a long period, usually several days; the virus circulates in the body of the vector (see also persistant transmission, propagative transmission) (contrasts with nonpersistant transmision, stylet-borne transmission)
coat protein
the protective layer of protein surrounding the nucleic acid core of a virus; the protein molecules which make up this layer (see also capsid)
coccus
a spherical (or near-spherical) bacterial cell
colonization
the establishment and ramification of a pathogen within a host plant
colonize
to infect and ramify through plant tissue with the growth of a pathogen
compartmentalization
the isolation of a specific tissue area by host barrier tissues
complete resistance
a resistant reaction in which some aspect of disease development, usually symptom expression or pathogen reproduction, is completely stopped (contrasts with partial resistance)
conjugation
the temporary contact of bacterial cells during which genetic material is transferred
contact fungicide
a fungicide that remains on the surface where it is applied and prevents infection often through the inhibition of spore germination; no after-infection activity (see also protectant fungicide) (contrasts with systemic fungicide)
continuous cropping
growing the same crop in the same location repeatedly
cotyledon
a seed leaf, one in moncots and two in dicots; primary embryonic leaf within the seed in which nutrients for the new plant are stored
crop rotation
the successive planting of different crop species; often used to improve soil fertility or to reduce disease and pest problems
cross-fertilization
a process in which sexual reproduction occurs as a result of the fusion of sex cells from different individuals (contrasts with self-fertilization)
cross-pollination
the transfer of pollen from the anthers of a flower on one plant to the stigma of a flower on another plant (contrasts with self-pollination)
cross-protection
the process by which a normally susceptible host is infected with a less virulent pathogen (usually a virus) and thereby becomes resistant to infection by a second, usually related, more virulent pathogen
cultivar
a plant type within a species, resulting from deliberate genetic manipulation, which has recognizable characteristics (color, shape of flowers, fruits, seeds and height or form) (see also variety)
cultural practices
the manner in which plants are grown, such as: application of nutrients, irrigation practices, type of cultivation; may be used for disease management
culture
the growth and propagation of microorganisms on nutrient media; growth and propagation of living plants
cuticle
the noncellular outer layer of an insect or a nematode; water-repellent, waxy layer of epidermal cells of plant parts, such as leaves, stems and fruit
cv. (abbr. for cultivar)
a plant type within a species, resulting from deliberate manipulation, which has recognizable characteristics (color, shape of flowers, fruits, seeds and height or form) (see also variety)
cytokinin
a plant hormones (growth regulator) that controls cell division and is important for shoot stimulation of callus in tissue culture
cytoplasmic inheritance
the inheritance of genes not located in the nucleus, i.e. those in mitochondria and chloroplasts (see also extrachromosomal inheritance, maternal inheritance)
damping-off
the death of a seedling before or shortly after emergence due to decomposition of the root and/or lower stem; it is common to distinguish between preemergence damping-off and postemergence damping-off
decoy crop
a crop that stimulates germination of seeds of a parasitic plant such as witchweed (Striga spp.), but is not susceptible to infection by the parasitic plant; helps reduce seed populations of the parasite in soil so a susceptible crop can be planted
desiccate
to dry out
determinate
ceasing vegetative growth when the first flower or reproductive structure forms
diagnostic (n. diagnosis)
pertaining to a distinguishing characteristic important for the identification of a disease or other condition
diapause
a period of spontaneous dormancy, independent of environmental conditions, interrupting developmental activity in an embryo, larva or pupa
dichotomous
branching, often successively, into two more or less equal arms
dicot or dicotyledon
a plant with two cotyledons or seed leaves (contrasts with monocot)
differential host
a plant host that on the basis of disease symptoms serves to distinguish between various strains or races of a given plant pathogen; differential cultivar
differential medium
a culture medium that is used to distinguish between organisms that can grow on it
differentiation
the physiological and morphological changes that occur in a cell, tissue, or organ during development from a juvenile state to a mature state
digitate
having lobes radiating from a common centre
dilution plating
a method to obtain pure colonies of bacteria and fungi in which infected plant material or infested soil is diluted in sterilized water. Small samples of the water are spread on the medium surface of several petri plates to find which dilution will produce pure colonies.
dilution streaking
the repeated streaking of bacteria on the surface of a nutrient medium with a sterile metal loop to allow pure colonies to grow
dioecious
having male and female organs on separate and distinct individuals (used primarily for plants) (contrasts with monoecious)
direct penetration
the penetration of plant tissues by a pathogen through a barrier such as leaf cuticle by chemical and physical means (e.g., infection peg, penetration peg) (contrasts with indirect penetration)
disease
the abnormal functioning of an organism
disease cycle
the succession of all of events and interactions among the host, parasite and environment that occur in a disease, from initial infection of the plant by a causal agent, through pathogenesis, to over-seasoning, until another infection occurs
disease incidence
the number of plants affected by a disease within a population
disinfect
to eliminate a pathogen from infected plant tissues
disinfest
to kill pathogens that have not yet initiated disease, or other contaminating microoganisms, that occur in or on inanimate objects as such soil or tools, or that occur on the surface of plant parts such as seed
dispersal or dissemination
the spread of infectious material (inoculum) from diseased plants to healthy plants
dormancy (adj. dormant)
a condition of suspended growth and reduced metabolism of an organism, generally induced by internal factors or environmental conditions as a mechanism of survival
downy mildew
a plant disease in which the pathogen appears as a downy growth on the host surface; caused by a member of the Oomycota (the oomycetes)
drift (of pesticides)
the movement of airborne particles of a spray, dust, or vapor away from the target area during or shortly after an application
durable resistance
a resistance that remains effective during prolonged and widespread use in an environment favorable to disease (see also horizontal resistance, race-nonspecific resistance) (contrasts with specific resistance, vertical resistance)
dwarfing
the underdevelopment of a plant or plant organs, which may be caused by disease, inadequate nutrition, or unfavorable environmental condition
ectoparasite
a parasite that feeds from the exterior of its host (contrasts with endoparasite)
ectotrophic
fungal development primarily over the root surface
effector
a pathogen molecule, usually a protein, that is translocated into host cells where it may act to directly manipulate host innate immunity
elicitor
a molecule produced by the host (or pathogen) that induces a response by the pathogen (or host)
ELISA (acronym for enzyme-linked immunosorbent assay)
a serological test in which the sensitivity of the reaction is increased by attaching an enzyme that produces a colored product to one of the reactants
endemic
native to a particular place; pertaining to a low and steady level of natural disease occurrence
endoparasite
a parasitic organism that lives and feeds from inside its host (contrasts with ectoparasite)
endophyte
a plant developing inside another organism; also used for endoparasitic fungi found in grass species
endoplasmic reticulum
the system of interconnected cytoplasmic membranes that transports materials within the cell
endosperm
the nutritive tissue formed within the embryo sac of seed plants
endospore
a resistant, thick-walled asexual spore formed within a bacterial or fungal cell
enzyme
a protein that catalyzes a specific biochemical reaction
epidemic
an increase of disease in a population; a general and serious outbreak of disease (see also epiphytotic)
epidermis (adj. epidermal)
the surface layer of cells of leaves and other plant parts
epiphytic
living on the surface of plants, but not as a parasite
epitope
an amino acid (or other) sequence that effects formation of an antibody
EPS (acronym for extracellular polysaccharide)
a sugar polymer that aids in movement, helps prevent desiccation, and contributes to the slimy appearance of bacteria, fungi, and nematodes; and probably promotes colonization of plant tissues and disease development in bacteria
eradication
the management of plant disease by eliminating the pathogen after it is established or by eliminating the plants that carry the pathogen
ergot
a disease of certain grasses and cereals, especially rye, caused by Claviceps spp.; a sclerotium, or resting structure, produced by Claviceps spp. and other closely related fungi in infected flowers of parasitized grain plants
ethylene
a plant growth regulator (hormone) influencing various aspects of vegetative growth, fruit ripening, abscission of plant parts, and the senescence of flowers
etiolation
the elongation of stems caused by reduced light intensities
exclusion
the management of disease by excluding the pathogen or infected plant material from crop production areas (e.g., by quarantines and embargoes)
exudate
a liquid excreted or discharged from diseased tissues, from roots and leaves, or by fungi
f. sp. (abbr. for forma specialis)
a taxonomic group within a pathogenic fungal species defined in terms of host range, i.e., members of different formae speciales infect different groups of plants; forma specialis for fungi is equivalent to pathovar for bacteria
facultative
capable of changing life-style, e.g. from saprophytic to parasitic or the reverse
facultative parasite
an organism that is normally saprophytic but is capable of being parasitic
fallow
cultivated land kept free from a crop or weeds during the normal growing season
fermentation
the oxidation of certain organic substances in the absence of molecular oxygen
filamentous
threadlike; filiform
fission
cell division in prokaryotes
fitness
the ability of an organism to survive and reproduce; the ability of an organism to pass its genes to the next generation
foliar
pertaining to leaves