Phylogenetic Tree Flashcards

1
Q

Phylogeny

A

Evolutionary history of a group of organisms

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2
Q

Phylogenetic Tree

A

A diagram that shows the evolutionary relationship between different species, organisms, or genes

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3
Q

Taxon(taxa)

A

Any named group of organisms

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4
Q

Clade

A

Nested groups that include common ancestor

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5
Q

Common Ancestor(MRCA)

A

Last common ancestor, inferred from last divergence(node)

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6
Q

Root

A

Base of the tree, represents ancestral lineage

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7
Q

Node

A

Branch point; where lineages diverge

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8
Q

Tips

A

Descendant taxa

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9
Q

Characters

A

Traits in common because they were inherited from common ancestors
Ex: morphological structures, DNA sequences, chromosomes numbers, behavior, chemical compounds

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10
Q

Apomorphy

A

Derived traits unique to the clade; distinguishes from ancestors

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11
Q

Synapomorphy

A

Apomorphy that is shared by multiple taxa as a result of shared ancestry
(Shared state among 2+ taxa)

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12
Q

Autapomorphy

A

Unique state for 1 taxon

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13
Q

Plesiomorphy

A

Ancestral state(if in 2+ taxa = symplesiomorphy)

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14
Q

Monophyletic (natural clade)

A

Group that include common ancestor + all descendants

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15
Q

Paraphyletic groups

A

Group that includes common ancestor + some descendants (excludes some descendants)

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16
Q

Polyphyletic group

A

Group that include some descendants (excludes common ancestor and some descendants)

17
Q

Sister taxa

A

Taxas in the same clade and shares the latest MRCA

18
Q

Homology

A

Similarity due to common ancestry

19
Q

Homoplasy

A

Similarity due to independent evolution of a character state; not from a common ancestor

20
Q

Convergence

A

Independent evolution of a similar ancestor

21
Q

Reversal

A

Loss of a derived character state

22
Q

Congruence

A

A measure of how similar genetic sequences are, and can indicate how closely related organisms are to each

23
Q

Basal

A

Outgroup

24
Q

Cladogenesis

A

Splitting of ancestral lineage into descendants lineages, thus forming a clade