Pharmacodynamics Flashcards
Definition of pharmacodynamics
how binding relationships between drugs (ligands) and their receptors and how dosing affects those relationships (dose-response relationships).
aka: the study of drug actions
Ligand definition
Is a drug/neurotransmitter that binds to a receptor. Discussed as both exogenous drugs and endogenous neurotransmitters when binding to a receptor.
Difference between pharmacokinetics and pharmacodynamics
Pharmacokinetics: study of what body does to the drugs
Pharmacodynamics: study of what the drug does to the body
Four types of receptors
- LGIC
- GPCR
- Nuclear Receptors
- Receptor tyrosine kinases
- LGIC mechanism
(aka ionotropic receptors)
sit within phospholipid bilayer of membrane and when activated allows charged particles (ions) to pass through fatty membrane via facilitated diffusion.
When ligand binds to the receptor, it causes a conformational change in structure of receptor that opens a central pore/channel to allow select ions across membrane
LGIC importance in body and example (1st discovered)
all neurons contain LGIC’s and are well-known neurotransmitter receptors (most)
Nicotinic receptor first discovered
All LGIC’s have:
5 subunits in receptor oriented around central core where the ions would normally go thru (pentamers)
Every nicotinic receptor has at least
2 alpha subunits among others. alpha subunit has the Ach (ligand) binding domain. You need 2 Ach ligands to bind to the 2 alpha subunits to result in conformational change for nicotinic receptor to open.
Each subunit composed of
4 transmembrane domains (TMI 4). 5 put together makes a pentamer channel
For nicotinic receptor…
K+ ions are allows to flow thru central core when Ach binds to it. This results in a very rapid response to Ach binding to it.
Takehome messages (two) of LGIC’s
Single action (ligand to bind) to open the receptor channel, are thus rapid (main advantage).
LCIC receptor can be both inhibitory or excitatory neuronal firing (depending on which ions can flow across channel).
- GPCR’s
Metabotropic receptors
Sit across membrane (7 transmembrane domains)
Primary ligand binding site at end tail
Inner portion binds to a G-protein.
When a ligand binds to a GPCR
causes conformational change in receptor structure allowing receptor’s GDP inside membrane to interact with a G protein.
G-protein
guanine nucleotide-binding protein
Steps of GPCR’s mechanism
- ligand binds to active site
- interacts with g-protein
- releases GDP
- Takes on GTP
- alpha subunit cleaves from beta-gamma subunit
- cleaved two are now active sites that have ability to phosphorylate other subunits inside the cell
- GTP eventually loses phosphate group and alpha subunit rebinds with beta-gamma subunit and they again become inactive until next time g-protein interacts with them.
Purpose of a GPCR?
To activate second messengers
second messengers
small molecules or ions that relay signals received by cell-surface receptors to effector proteins inside cell.
Broadcast the first message relayed by GPCR’s
Typically at low concentrations in resting cells and can be rapidly produced or released when cells are stimulated.
Once G-protein has been cleaved, that active 2nd messenger can
phosphorylate multiple other proteins in the cell.
Difference b/w GPCR and LGIC
when ligand binds to LGIC, only effects that one receptor and making membrane leaky for that one ion. gpcr opens cascades of proteins, etc.
Kinase
adds phosphate group to a protein, inducing conformational change in the protein and activates it. Uses ATP as energy
Phosphatase
removes a phosphate group from protein, inducing conformational change in the protein and resets it to its inactivated state.
2nd messengers and downstream effects of drugs from GPCR’s in cells all involve
phosphorylation/dephosphorylation of proteins.
The primary mode of intracellular signaling is
the tug of war between kinases and phosphatases and if/if not phosphorylated
Three types of second messengers
- Adenylyl cyclase and cAMP
- PIP3 activation of PLC to generate the two second messengers called DAG and IP3
- Ca2+ ions