PHARMA YR2 Flashcards

1
Q

What is addiction?

A

Addiction is a chronic, relapsing disorder characterized by craving, compulsive drug use. It can be characterized as a brain disease. 20/40% of people who experiment with drugs develop an addiction.

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2
Q

What circuits can a drug addiction affect?

A
  1. Reward: dopamine transmission is increased bc of the drug.
  2. Motivation
  3. Memory/learning
  4. Inhibitory control
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3
Q

What are some pathways in which dopamine is involved?

A

Mesolimbic pathway: associated with pleasure, reward and goal directed behavior.

Mesocortical pathway: associated with motivational and emotional responses.

Nigrostriatal pathway: involved in coordination of movement.

Tuberoinfundibular pathway: regulated secretion of prolactin by the pituitary gland.

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4
Q

What are the steps that lead to drug addiction?

A

Drug use: activating the reward system
Tolerance: increased doses needed to provide same effect
Dependence: withdrawal symptoms if i stop usage
Addiction: lost control of taking habits

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5
Q

How is alcohol metabolized?

A

It is metabolized mainly in the liver where it is oxidized by an enzyme called Alcohol Dehydrogenase to Acetaldehyde. It is then transported to the mitochondria where it is oxidized by Aldehyde Dehydrogenase into Acetic acid. Acetic acid is released in the circulation and it is eliminated though the kidneys.

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6
Q

What are some protein receptors alcohol binds with and what are the consequences?

A

GABA A receptors: the activation causes hyper polarization which in turn causes chloride ions to enter the cell. This is linked to sedative effects.

Glutamate Receptors: reduce excitation and is linked to memory deficit.

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7
Q

What are some effects of chronic intoxication of alcohol?

A

GI Tract: gastritis, damage to mucosa, problems with absorption.
Liver: oxidative stress, cellular necrosis, damage to hepatocytes, inflammation, liver cirrhosis.
Neurological: pellagra, tremors, seizures, Warnick’s encephalopathy.
Cardiovascular: cardiomyopathies, hypertension, chronic heart failure and stroke.
Hormonal: impotence, gynecomastia and infertility.
Fetus: cause birth defects like Fetal Alcohol Syndrome and others.

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8
Q

What are the four steps of alcohol’s pharmacokinetics?

A
  1. Absorption of alcohol: 10/20% absorbed in the stomach the rest in the intestine. Affecting absorption are factors like empty stomach and speed of consumption.
  2. Distribution of alcohol.
  3. Metabolism of alcohol.
  4. Elimination of alcohol: eliminated through, 98% urine, 2% sweat and breath.
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9
Q

What are some drugs to treat alcohol dependance?

A

Disulfiram, the first drug ever developed, Naltrexone, Acamprosate and Naltrexone Depot.

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10
Q

How does the drug Disulfiram work?

A

It is a drug prescribed to be taken before alcohol consumption which cause the patient to have adverse effects like headache and vomit. Now it is not used as patients simply stopped taking the drug instead of stop drinking. It worked by inhibiting Aldehyde Dehydrogenase which cause an accumulation fo acetaldehyde.

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11
Q

How does the drug Naltrexone work?

A

It is a competitive antagonist of opioid receptors and also reduces alcohol induced dopamine release. It was more efficient when coupled with psychological support. The adverse effects are nausea, diarrhea, fatigue and headache.

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12
Q

How does the drug Acamprosate work?

A

It is an NDMA antagonist, restores glutaminergic control and reduces alcohol self administration and reduces emotional response to object or situation that recall drinking. It still has adverse effects but less than naltrexone, which include diarrhea, irritability and fatigue.

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13
Q

How does the drug Topiramate work?

A

It is an allosteric modulator of GABA, Ca2+ channel inhibitor and Na+ channel modulator, therefore it restores normal excitability. It reduces dopamine release and self administration. It has one of the highest efficacy’s between these drugs. There are still some adverse effects like: somnolence, depression, anorexia.

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14
Q

How does the drug Gamma-Hydroxybutyrate work?

A

GHB is a GABA agonist and a “substitute” of alcohol. It is distributed illegally and used as a strength enhancer as people claim it helps metabolize fat and build muscle. There are reports of it being used as a date rape drug. It is only used sometimes in early treatments and has abuse potential, bradycardia, nausea and vomit as adverse effects.

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15
Q

What are the fundamental concepts to keep in mind about drugs and their administration?

A

Drug: it consists of the Active Pharmaceutical Ingredient.
Medicine: drug + excipients which are molecule that make the distribution of the drug in the body easier.
Dosage: appropriate API regiment plus timing to achieve the desired affect.
Pharmacological effect: effect of the drug on bodily functions.
Therapeutic effect: the positive effect you get depending on the dosage prescribed.

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16
Q

What are the different types of administration of a drug?

A

Enteral: through GI tract so oral, sublingual or rectal.
Parenteral: IV, Intrathecal, subcutaneous etc.
Topical: on the skin, eye etc.

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17
Q

What are the two fundamental parameters for drugs excretion?

A

Half life: time required for the plasma concentration to be reduced by 50%.
Clearance: rate at which the drug is removed form the plasma divided by the concentration of the same drug in plasma.

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18
Q

What are the four phases of clinal research of a drug?

A

Phase I: limited number of paid volunteers to test safety
Phase II: small number of patients to find optimal dosage of the drug.
Phase III: larger number of patients to see the efficacy of the drug, submission of data to FDA for example in USA.
Phase IV: Pharmacovigilance

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19
Q

What are Induced Pluripotent Stem Cells used for in drug research?

A

We start from a human sample (like fibroblasts) and we reprogram them into our cell of
interest. The advantage compared to animal models is that the reprogrammed cell will contain the human genome. They can be useful to assess a drug efficacy/toxicity or for cell replacement therapy.

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20
Q

How are Organoid realizations used in drug research?

A

They’re a simplified 3D version of an organ, they can derive from surgical specimens or from biopsy tissue. They have a lot of applications (drug modelling is among them).The advantage is that cells can interact among themselves in the matrix (collagen mostly) and even with other cell populations. It’s a miniature structure of the organ you’re dealing with.

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21
Q

What is phenotypic screening?

A

It consists in compounds being screened in cellular or animal disease models, in order to identify which is the compound that causes a desirable change in the phenotype.

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22
Q

What is the purpose of OMICS, cell tissue expression profile?

A

The function is to identify the target, in order to possibly create a specific drug for them. The OMICS are genomics, transcriptomics, proteomics and metabolomics.

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23
Q

What are Metabolomics? What are the different types?

A

Metabolomics studies metabolites that are modified inside the cell or tissue upon a pathological condition. Targeted Metabolomics are a process through which we go looking specifically for a metabolite, most of the time by using a radioactive compound. Instead, untargeted metabolomics are a broad analysis of how a pathologic condition is changing the profile of all the metabolites of the cell, tissue or organism. So, it is the simultaneous measurement of many metabolites, and it is very complex.

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24
Q

What is druggability?

A

Druggability is the likelihood of being able to modulate a target with a small-molecule drug. If there are drugs that can modulate the function of that target, that target is druggable.

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25
Q

How can we asses druggability and what are the processes to keep in mind?

A

Sequence based: Predictions made based on the characteristic sequence of the target.

Structure-base: Predictions made based on the 3D structure of the molecule or high-quality homologous models.

Ligand based: Predictions made based on the likelihood of interaction between the natural ligand of the compound and the target molecule.

Precedent based: Predictions based on proteins that already have been established and compounds that are undergoing clinical trials.

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26
Q

What is target validation?

A

Target validation consists in a group of experimental activities to verify the therapeutic value of a biological target. For that we need to demonstrate that the target expression and anatomical distribution are consistent with the disease. The define the pharmacological profile needed to achieve this effect.

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27
Q

What does silencing a target of interest mean?

A

Blockage or reduction of the protein function —> to mRNA —> no protein —> altered phenotype —> to see the effects on the onset of disease.

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28
Q

What are the different means of silencing a gene?

A

Insert point mutations, distraction of transcription and deletion of exons.
Ex. ShRNA Knockdown, creates a loop in the RNA that interferes with the translation of a target.
CRISPR Cas 9 technology is a sort of precise surgery approach that tackles only a few bases of interest.

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29
Q

What are the two different types of gene knockdowns in mice?

A

Tissue Specific: The genome of interest or the target protein, is not only expressed in the tissue where it is normally is, but it is also expressed and maintained in other regions.

Time Specific: If we have a protein that is expressed only in a specific window of the lifetime of the animal. There are means by which we can inactivate them expression of that protein in that window of time.

Inducible Knockdown: We can switch on to off the target protein depending on the experimental settings.

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30
Q

What are some endpoints used to design a drug?

A

Biochemical/molecular bio markers: The first thing to do is to analyze its protein and mRNA expression.
Histopathological analysis: we perform a histology, immunohistopathology and moprhometry analysis.
Physiological analysis: Hemodynamics parameters, ECG, EEG
Behavioral analysis: we must see hoe the modifications we induced modify the behavior of the subject.

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31
Q

What are some types of bio markers and what are some examples?

A

Pharmacodynamic/Response biomarker: identify pharmacological response to treatment.

Predictive biomarkers: identify which patients are likely to respond to a particular treatment.

Safety biomarkers: monitor whether there is an adverse effect of the treatment.

Susceptibility/risk/prognostic biomarkers: identify patients at risk of disease occurrence or progression in absence of treatment.

Diagnostic biomarkers: determine the presence of the disease.

Screening biomarkers: identify patients at risk of developing a disease.

Monitoring biomarkers: already present at the begging of treatment and tell how things are going.

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32
Q

How can bio markers be classified?

A

Type 0: correlation between levels and symptoms.
Type 1: used to monitor target engagement.
Type 2: correlates with core pathology of the disease. Considered surrogate endpoints.

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33
Q

Why use a surrogate endpoint instead of a clinical endpoint?

A

Bc they are faster and easier to study, also bc they may be unethical. Ex. Surrogate endpoint for cancer can be tumor volume while the true endpoint might be death.

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34
Q

What are the four parameters considered when selecting a drug?

A

Therapeutic indication, pharmacokinetics and drug metabolism, toxicology and formulation.

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35
Q

What are single blind and double blind studies?

A

Single blind: are clinical trials in which only the researcher knows the treatment.

Double blind: are clinical trials in which neither the researchers nor the patient know the treatment.

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36
Q

What are some of the reasons why only 1 out of 3 drugs makes it through phase 1?

A

Failure due to efficacy of the product, failure due to commercial considerations such as companies not willing to invest.

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37
Q

What can you do if clinical trials fail?

A

Spread financial risk, re do a phenotypic screening, drug repurposing.

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38
Q

What approaches and changes can be used for drug repurposing?

A

Changing the dosing routes, changing the dosage regiments, targeting a different patient population and matching mechanism of action to disease.

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39
Q

Nicotine abuse:?

A

Most abused psycho stimulant in the world. It is responsible for tobacco dependence increasing the dopamine in the nucleus accumbens. It increases alertness, relaxes muscles, nausea, tachycardia and hypertension.

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40
Q

What are some drugs used to treat nicotine abuse?

A

Varenicline: partial agonist of nicotinic receptors

Bupropion: antagonist of nicotine

Rimonabant: antagonist of CB1 receptor of cannabinoids

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41
Q

What is the mechanism of action of cocaine?

A

Cocaine acts by blocking the reuptake of dopamine in the synaptic
cleft. Furthermore, noradrenaline, serotonin and other monoamines
reuptake is blocked and affected.
There is a boost of the levels of dopamine.

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42
Q

What is MDPV?

A

MDPV is a derivative of MDMA. It was developed in the 60s as a drug for chronic fatigue and appetite suppression. The most common route of administration is intranasal. The effects are similar to methamphetamines, MDMA or cocaine. Since these compounds share the mode of action, it is a norepinephrine and dopamine reuptake inhibitor.

43
Q

What is mephedrone?

A

Mephedrone is ingested orally, inhaled or rectally. It is also a norepinephrine- dopamine reuptake inhibitor. Unlike MDPV, mephedrone has a much shorter half-life of about 45-60 minutes.

44
Q

What is PCP?

A

PCP, phencyclidine, was developed as a general anesthetic but because of the significant side effects (hallucinations, delirium, mania) it was discontinued as an anesthetic. Now ketamine has taken its place with a similar mode of action and less side effects. PCP is highly addictive. PCP has a different mechanism of action compared to the aforementioned drugs; it doesn’t really act on serotonin, dopamine, noradrenaline or other monoamines, but rather on glutamate ion-gated NMDA receptors.

45
Q

What are cannabinoids?

A

Cannabinoids are terpenoids. They are highly lipophilic, as it can be inferred from their structure, so they are highly soluble in oil and only poorly soluble in water. In the plant, they are slightly acidic but after drying and heating they become neutral. The main psychoactive compound of cannabis is Δ9-tetrahydrocannabinol.

46
Q

What do cannabinoid bind to?

A

They interact with CB1 and CB2 receptors. CB1 are found in the CNS and CB2 are mostly found peripherally. CB1 is involved in learning, memory, cognition and motor control. CB2 are less studied but they are involved in inflammation, immune response, cell apoptosis and neural disorders. They bind also to PPARs which are important in cell cycle and division.

47
Q

What are endocannabinoids? What are some examples?

A

We produce endogenous cannabinoids that bind to CB1 and CB2 receptors. These endocannabinoids are derived from arachidonic acid, hence from membrane lipids. They are precursors in the membranes. There are two families of endocannabinoids: amides and esters. Endocannabinoids are “made on demand”, meaning that they are produced when they are needed. The two main endogenous cannabinoids are anandamide and 2-AG. Anandamide is much more selective for CB1, while 2-AG binds to both CB1 and CB2.

48
Q

How is anandamide synthesized?

A

Anandamide is synthesized by the enzyme PLD (NAPE-phospholipase D). Hence, we first have PE (phosphatidylethanolamine), which is then converted into NAPE (N-arachidonoyl phosphatidylethanolamine). This is then converted to anandamide. Finally, anandamide is converted to ethanolamine and arachidonic acid by FAAH (fatty acid amide hydrolase).

49
Q

Who degrades 2-AG?

A

MAGL, monoacylglycerol lipase, breaks it down into glycerol and arachidonic acid.

50
Q

What is sativex?

A

Sativex is an oromucosal spray with a THC to CBD ratio of 1:1. It is used for MS spasticity as a muscle relaxant in order to relieve pain. It binds to the CB1 receptor present at glutamatergic synapses. This reduces the excitatory activity of glutamate (there is a boost of glutamate in these spasms).

51
Q

What is nabilone?

A

Nabilone is an analogue of THC. It is administered in form of capsules. It is used for treating nausea and vomiting induced by chemotherapy.

52
Q

What is Marinol?

A

Marinol is a synthetic THC. It is a highly potent agonist for CB1 and CB2. It is approved in the US and in Canada for appetite stimulation in AIDS patients and as an antiemetic in patients undergoing chemotherapy.

53
Q

What is Cesamet?

A

Cesamet contains nabilone, which is a THC analog. It is produced in form of capsules. It is an even more potent CB1 and CB2 agonist. It is approved in the US and in Canada as an antiemetic in patients undergoing chemotherapy.

54
Q

What are the effects of THC and CBD? Why are they used in 1:1 ratio?

A

The effects of THC are analgesic, anti-spasmodic, anti-tremor, anti-
inflammatory, appetite-stimulating and antiemetic. These effects are mediated through activation of CB1 and CB2 receptors.CBD has anti-inflammatory, anti-convulsant, anti-psychotic, anti-oxidant, neuroprotective and immunomodulatory effects. CBD counters some of the side effects of THC. Furthermore, it delays and reduces the intensity of intoxication by THC. We hence use a 1:1 ratio of THC to CBD because THC is more important for some of the effects but in order to counteract side effects, we need CBD.

55
Q

What are the target receptors of CBD?

A

CBD has little activity at the CB1 receptor but greater activity on the CB2 receptor. It targets are TRPV1 receptors and 5-HT1A receptors. It also inhibits the uptake and breakdown of anandamide.

56
Q

What is epidolex?

A

Epidiolex is a purified cannabidiol from cannabis. In the US, it is authorized for orphan pathologies and under testing as an anticonvulsant for pediatric epilepsy. The Dravet and Lennox- Gastaut syndromes are orphan pathologies, which are very debilitating for children. There is no approved drug yet. Now, Epidiolex is tested for the treatment of these syndromes and it seems to work very well because it has an anti-seizure effect.

57
Q

Why are cannabidiols used in multi factorial pathologies?

A

Because they produce their pharmacological effects by interacting with multiple molecular targets, and their pharmacological fingerprint can better match that of multi-factorial pathologies (e.g., depression, MS) than can be obtained with THC since it is much more likely that a drug with a multi-factorial activity is effective in such a disease as compared to a drug that only acts on one receptor.

58
Q

What are psychedelics tested to treat now?

A

Cancer related psychiatric, existential distress, addiction from tobacco, alcohol, Cocaine and opioids, major depression and anxiety disorders.

59
Q

Why are psychedelics generally considered physiologically safe? What is a bad trip?

A

Generally, psychedelics are considered safe from physiological perspective. They are not associated with organ damage (unlike cocaine, amphetamine etc.) and do not display carcinogenicity or
teratogenicity.

During acute psychological distress or also called bad trip the patient experiences a dreamlike state and may feel depressed, anxiety, panic, agitation, fear and delirium.

60
Q

What is the correlation between LSD and psychosis?

A

Past LSD research shows that chances of psychosis lasting >2 days are relatively low: in normal volunteers 0.8 per 1000, in patients 1.8 per 1000. Despite these low numbers, we must keep in mind that administration of psychedelic will make some patients experience psychosis. In patients with psychiatric disorder suicide attempt was 1.2 out of 1000.

61
Q

Why are psychedelics not addictive?

A

Psychedelics do not lead to addiction because they do not boost dopamine in reward pathways, thus they do not lead to any withdrawal symptoms even if the patient uses psychedelics for a long period of time.

62
Q

What is the effect of psilocybin on default mode network?

A

Most importantly psilocybin seems to enhance brain’s capacity for change, also known as neuroplasticity. In many disorders brain appears to work in an abnormal way in comparison to a healthy individual. Hence these hyperactive/hypoactive parts of the brain could be targeted with psychedelics for treatment.
• Psilocybin’s indole ring containing a nitrogen resembles the chemical structure of serotonin. That’s why it binds to 5HT-2A (serotonin) receptors and produces mind-altering effects.

63
Q

What is the default mode network?

A

Default mode network is a large-scale brain network responsible for controlling emotion, mood, and appetite. It’s composed of several regions. This region is controlled by serotonergic innervation. This network is active when the person is not focused on the outside world, when the brain is at wakeful rest (daydreaming/mind-wondering).

64
Q

How did psilocybin affect cancer patients?

A

Cancer Psilocybin is used to treat psychological distress that may be present in cancer patients, which have a higher likelihood of developing depression or anxiety due to their medical condition.
Depression/anxiety, this study uses Hamilton rating scale in which patients are asked questions and their answers have scores or 0, 1, or 2. For example, Hamilton score of 20 indicates depression of medium severity. The graph shows that after one high dose of psilocybin patients significantly reduced their Hamilton score (ex. a drop from 23 to 6 in HAM-D), which indicates a relief from depression symptoms. And even after the one low dose there is a significant improvement.

65
Q

How does psilocybin affect patients with nicotine addiction and alcohol addiction?

A

Participants had 3 psilocybin sessions over the course of 8 weeks. The graph shows that even after 3 years there is still a high percentage of participants (around 60%) that remained abstinent from nicotine after psilocybin administration.

A similar trend is shown in the alcohol dependence pilot study which tested alcohol-dependent participants. All had to undergo motivational enhancement therapy and 2 psilocybin sessions.
Results show that patients treated with psilocybin has significant reduction in number of heavy drinking days and effect was well-maintained over time.

66
Q

What is esketamine?

A

Esketamine is S-enantiomer of the racemic ketamine. It is a non-selective, non-competitive antagonist of the NMDA receptor, an ionotropic glutamate receptor. Esketamine is levorotatory, but it’s administered as ketamine intravenously to reduce the depression symptoms. Also, it can be administered via nasal spray. It’s a potent drug for major depression as it seems to reduce suicidal behavior in the treatment-resistant depressed patients. It’s important to remember that esketamine can interact with other drugs

67
Q

What is beta 2 receptor?

A

Beta 2 adrenergic receptor is a celle membrane receptor that binds adrenaline. Ultimately it increases heart rate, pupil dilation etc.

68
Q

What are tyrosine kinase inhibitors?

A

Tyr kinase inhibitor is a drug that inhibits tyrosine kinases which are responsible for the activation of many signal transduction pathways.

69
Q

What is an agonist, antagonist or partial agonist?

A

Agonist: is a chemical that activates a receptor to produce a biological response. Ex. Heroin

Antagonist: is a chemical that binds to a receptor and causing a halt or blockage of something. Ex naltrexone which displaced opioids.

Partial agonist: is a chemical that binds and activates a receptor but doesn’t have the full efficacy. Ex THC in both CB1 and CB2 receptor

70
Q

What are NSAIDs?

A

Non Steroidal Anti Inflammatory Drugs are medicines that are used to relive pain, reduce inflammation and bring down a fever. Some ore over the counter such as Ibuprofen. Might have side effects such as indigestion, headache and drowsiness. The mechanism of action is the inhibition of the enzyme Cyclooxygenase, COX, as the inhibition stops it from converting archidonic acid into prostaglandins and prostacylines.

71
Q

What is aspirin and why is it an anticoagulant?

A

Aspirin is effective in the treatment and prevention of a variety of medical conditions. It has ‘analgesic’, ‘anti-pyretic’ and anti-inflammatory properties and so can be used in adults to treat pain, fever and inflammation. Aspirin in low doses (2-5 milligrams/kg) prevents the aggregation of platelets thereby preventing the formation of blood clots. It does this by inhibiting an enzyme called cyclo-oxygenase thereby preventing the formation of a substance called thromboxane which acts as a scaffolding for platelets to aggregate and form a blood clot.

72
Q

Aspirin and pregnancy?

A

Since aspirin inhibits COX therefore the production of prostaglandins and one of them specifically is PEG2. Prostaglandins in a pregnant woman is used for labor induction or termination of pregnancy.

73
Q

Dopaminergic antagonists and antipsychotics? What are the side effects of typical and atypical antipsychotics.

A

DRA are a type of drug that block dopamine receptors. Most antipsychotics are DRA and used to treat schizophrenia and bipolar disorder.
Typical aka first generation antipsychotics can cause extra pyramidal side effects such as; spasm, stiff muscles, involuntary facial movements.

Atypical aka second generation antipsychotics are not only DRA but act of serotonin receptor 5HT2A. They cause less extra pyramidal side effects but have more metabolic side effects such as weight gain, high cholesterol, BP and blood sugar.

74
Q

How is clearance calculated?

A

The dose of the drug divided the AUC which is calculated using the patient mass.

75
Q

How can we increase the elimination of a drug?

A

Urine pH is a great influence on whether a drug is excreted quickly or slowly and in some clinical situations is manipulated to control the excretion of certain drugs from the body. In alkaline urine, acidic drugs are more readily ionised. In acidic urine, alkaline drugs are more readily ionised. Ionised substances (also refered to as polar) are more soluble in water so dissolve in the body fluids more readily for excretion.

76
Q

What are the effects of psycho stimulates such as Amphetamines, methamphetamines and cocaine?

A

They all lead to psychomotor stimulation, euphoria, tachycardia, and increase confidence, energy and sociability.
Cocaine works by blocking the reuptake of dopamine in the synaptic cleft.
Meth and amphetamines effect the CNS by releasing dopamine, norepinephrine and serotonin.

77
Q

Miosis vs mydriasis in drug overdoses?

A

Opioids like morphine, fentanyl or heroin tend to give miosis so a constricted pupil less that 2mm.

Cocaine, ecstasy and hallucinogenic can cause mydriasis or in other words dilated pupils over 7mm.

78
Q

What are benzodiazepines?

A

They are used to treat anxiety and sleep disorders. Some known names are Xanax and Valium. Benzodiazepines act on GABA receptors specifically GABA A. When they bind they have an allosteric effect on GABA binding allowing an influx of negative charged chloride ions causing hyperpolarization and decrease le likely hood of an action potential.

79
Q

What is the first pass effect and bioavailability?

A

First pass effect: orally taken drugs pass first through the liver before reaching systemic circulation, and since the liver metabolizes the drugs a lower percentage that what originally was taken is going to enter systemic circulation.

Bioavailability is the percentage of the drug that reaches systemic circulation. For example IV route is 100% bioavailable.

80
Q

What are Atropine and Scopolamine?

A

Atropine: is used to treat low HR, before surgery for example. It is an anticholinergic, specifically anti Muscarinic. It inhibits effects of excessive vagal activation

Scopolamine: It is used to treat motion sickness, postoperative nausea and vomiting. It is an anticholingergic

81
Q

What are some factors that affect drug absorption?

A

Lipophilicity since it needs to cross cell membrane and biological barriers. Ph difference with the drug in the stomach can readily ionize and make more soluble certain compounds. Surface area in the GI tract, Blood perfusion, presence of mucus.

82
Q

What are some positive and negative notions of oral and rectal administration?

A

Rectal administration can be useful when a patient is vomiting or has nausea but it can interrupt defecation and the patient may not accept this route.

83
Q

What is Pharmacodynamics?

A

It is the study of how a drug affects our body. Generally a drug will react with a protein aka a receptor. The Ligand that binds to the receptor and in essence turn the receptor on a evoking a conformational change and propagates a signal.

84
Q

What is potency?

A

It is the amount of drug required to produce a particular effect, or the concentration required to produce 50% of maximal effect.

85
Q

What is efficacy?

A

It is the maximum effect that can be achieved by a drug.

86
Q

What are the types of receptors?

A

Ligand gated ion channels: the ligand binds to the receptor causing ions to flow across the membrane.
G protein coupled receptors: 3 subunits know as the G protein. Alpha subunit has GDP attached and when the ligand binds GDP is displaced and GTP takes ita place. This causes the subunits to disassociate and interact or regulated a response.
Enzyme linked receptors: mostly tyrosine kinase type which means that they display kinase activity and there is tyrosine involved. When the ligand binds it causes a conformational change bc the tyr regions get activated, ADP is displaced by ATP which phosphorylates the Tyr.
Intracellular receptors: It is located entirely inside the cell.

87
Q

Paracetamol effect?

A

Aka acetaminophen, has a central analgesic effect that is mediated through the activation of serotonergic pathways. It is a COX1, 2 and 3 inhibitor. COX 3 is specialty sensitive to paracetamol.

88
Q

What is pilocarpine?

A

It is a muscarinic cholinergic agonist used on the eye to treat various types of glaucoma and to induce miosis.

89
Q

What are antihistamines?

A

Ex. Meclizine , cyclizine. They bind histamine receptors and inactive it. The first generation histamines had strong somnolence unlike the second generation which have a lower CNS penetration therefore less somnolence.

90
Q

What are autocoids?

A

They are biological factors that act like local hormones. They modulate activity of smooth muscle, glands, nerves, platelets. Examples are eicosanoids, angiotensin, NO, histamine and serotonin.

91
Q

What is propranolol?

A

It is a non selective beta adrenergic antagonist. It decrease HR.

92
Q

What are triptans?

A

They are a group a medicines that are used against migraines or headaches. They are agonists for serotonin 5HT1D receptors at blood vessels and nerve endings. Ex Naratriptan.

93
Q

What is a HIT?

A

It is a compound or a chemical class that has a suitable pharmacological profile.

94
Q

What is a lead?

A

It is a compound or chemical class with a suitable profile both in vitro and in vivo.

95
Q

What is a candidate?

A

Single compound with suitable pharmacological profile associated with proper develop ability features.

96
Q

Which molecules are tested in high throughput screenings?

A

Small molecules in the range of 300-700 daltons bc they penetrate the cells.

97
Q

What are High Throughput Screening?

A

HTS is the use of automated equipment to test rapidly thousands of samples for biological activity.

98
Q

What are the different libraries in HTS?

A

Focused: if we have already an idea of the target (of
the hit). E.g., if we know that the hit is a GPCR, I might use a library that tests compounds already screened and designed for GPCR.

Broad: if we have no idea. It samples everything we
can think of in the chemical universe. This is much more expensive.

99
Q

What is the knowledge based approach?

A

Computer algorithms developed to understand the proper structural requirement to maximize ligand target interaction.

100
Q

What are the two docking types?

A

Rigid docking: the internal geometry of both the receptors an the ligand is rigid and there are only 6 degrees of freedom.

Flexible docking: flexible ligand binding into rigid target.

101
Q

What is structure based and ligand based?

A

Sb: relies on the structure of the protein (that needs to be
known). The basic assumption here is that there should be shape similarities between the molecules tested and the actual chemical
compounds.

Lb: no need for the structure of the molecule, but need the
structure of the ligand. It used the information already known on active ligands on that target to device and design new molecules that could be much more effective.

102
Q

What are the pros and cons of virtual screening?

A

Pros: fast, cheap.
Cons: false positive rate, limited chemical space.

103
Q

What is fragment based drug design? What is the main advantage?

A

Generates a compound starting from a chemical fragment. This is a very powerful method to develop a potent small molecule starting from very big ones.

The main advantage is to increase chemical diversity → we might get HITs that are suitable for different targets. Huge libraries are not needed, small portions are enough.