PDFs Flashcards
The outer membrane of mitochondria is _____
semi-permeable
Mitochondrial membranes are transported via ____ and ____ complexes
TOM and TIM
GTPases involved in fusion
Mfn OPA1
GTPases involved in fission
Fis1 and DRP
Free energy released in oxidation of glucose
NADH
Electrons transferred from NADH to ___ to form ____
O2 to form H2O
Two parts of ATP synthase
f1 and F0
F0 spans the ______ mitochondria membrane and forms a ______
inner
proton channel
F1 is bound to ___ and ____
F0
is an actual enzyme that makes ATP
Once made, ATP is transported out of mitochondria via___
ATP-ADP antiporter
Ischemic injury results in ____________ permeabilization of inner and outer mitochondria membranes, resulting in cytochrome release and elimination of proton gradient
MPTP dependent
Damaged mitochondria make excessive amounts of ___
ROS
Mitochondria quality is strictly controlled at three levels:
- mitochondrial proteases (MAAA, iAAA, and Lon) degrade misfolded proteins
- fusion with healthy mitochondria can fix it
- apoptosis
Arsenic
inhibits oxidative phosphorylation and ATP production
Mfn and OPA mutations
- autosomal dominant optic atrophy
- charcot- marie tooth type 2A
Mutation in MAAA
Hereditary spastic paraplegia
CF is caused by a defect in an
ATP-binding cassette transporter gene on chromosome 7 that encodes for the CF Transmembrane Conductance Regulator (CFTR) protein
Categorization of CFTR mutations
5 main classes
Most common mutation in CF
F508del
Major cause of morbidity and mortality in CF
lung involvement
depleted _______ layer in the lung leads to impaired ___________ and altered host defense
pericilliary
mucocilliary clearance
CF- Sinus
chronic sinus infections, nasal polyps
CF- lung
respiratory inections, bronchiectasis
CF- pancreas-
exocrine pancreatic insufficiency
CF- GI
Distal ileal obstructive syndrome
Sweat chloride >___ mmol/L indicative of CF
60
Diagnosing CF
IRT/IRT/DNA immunoreactive trysinogen (pancreatic enzyme)
Nutrition treatment CF
HIgh- calorie, protein, fat
Supplementation of vitamins A, D, E, and K (fat soluble)
Lung treatment CF
airway clearance therapy
antibiotic therapy targetinf common CF related bacteria
Anti-inflammatory treatments
CFTR modulators
Target specific CFTR mutations
Mutation treated with Ivacaftor
G551D
Orkambi mutation
F508del
Median life expectancy CF
40
Basal bodies are ____
Microtubule rich cylinder shaped structures
Basal bodies are made of
9 triplet microtubules (A-B-C tubules)
Distal end of basal bodies responsible for
nucleating the cilium
Structural skeleton of cilium
Axoneme
Structure of axoneme
A-B tubules that form from a ans b tubules of basal body
function of axoneme
scaffolding
tracks for movement within cilia
Linker of basal body to axonome and ciliary body
transition zone
“Gatekeeping” function of transition zone
limits diffusion of membrane and soluble proteins into and out of cilium
Part of cilia continuous with the cellular plasma membrane
ciliary membrane
mechanism of transport of signaling components within cilia
intragflagellar transport
proteins involved in movement to ciliary tip
Kinesin-2
IFT-B
Ciliary retrograde transport proteins
dynein 2
IFT-A
Two phases of ciliogenesis
- centrioles/basal bodies assembled
2. Formation of cilium
Basal bodies are derived from
centrioles
Centriole that functions as basal body
Mother centriole
Ciliogenesis occurs during _____ of the cell cycle
G1 (or G0)
Ciliogenesis begins when the distal end of a basal body is capped by a _____
ciliary vesicle
What happens after a basal body is capped by a ciliary vesicle?
Microtubule doublets then assemble into the ciliary vesicle before the entire structure fuses with the plasma membrane of the cell
Motile cilia are required for the movement of fluid in the ____, _____, and _____ tracts
respiratory, neural, and reproductive
Motility of motile cilia is produced by ____
axonemal dynein dependent sliding motion between the doublet microtubules of the ciliary axoneme
Motile cilia microtubule arrangement
9+2
Not all have this arrangement (Nodal)
The distinguishing factor between motile and immotile cilia is the presence of
axonemal dynein arms between the doublet microtubules
Non-motile, sensory or primary cilia microtubule arrangement
9 + 0
Pathway well established to signal through cilia
Hedgehog (Hh)
Hh target
Gli transcriptional activator
Downstream targets of Hh signaling
limb formation
bone formation and homeostasis
neurogenesis
Characteristics of ciliopathies (6)
- rare
- pleiotropic
- Overlapping
- structural
- diverse
- genetically complex
Two examples of ciliopathies
- Bardet- biedi syndrome (BBS)
2. Polycystic kidney disease (PKD)
BBS is autosomal ____
recessive
BBS proteins participate in a protein complex that is required for
vesicle transport within the cilium
Symptoms of BBS
Photoreceptor degeneration • Anosmia • Mental retardation / Developmental delay • Neural tube defects • Obesity • Hypogonadism • Kidney defects • Polydactyly • Diabetes
PKD is autosomal ____
dominant (ADPKD) and recessive (ARPKD)
ARKPD is caused by _____ mutations
fibrocystin
ADKPD is caused by mutations in ____ and _____
polycistin 1 and polycistin 2
PKD genes encode
channel proteins responsible for calcium signaling
Symptoms of PKD
Renal cysts
• Liver and pancreas cysts
• Intracranial aneurysms
Epithelial tissues are a-
avascular
Functions of epithelia (7)
- Barrier
- selective absorption and transport
- secretion
- Movement of particles
- Biochemical modification of molecules
- Communication
- Reception of sensory stimuli
Tissue that faces blood/lymph
endothelium
sheets of cells that line the enclosed internal spaces of the body cavities are called
mesothelium
____ layer of all mucosa is epithelium
Surface
Examples of organized comprised of epithelial cells that are the primary functional units
liver, pancreas, kidney
Epithelia are derived from which germ layers>
All three
Two layers of mucosae
- outer epithelium
2. CT underneath- lamina propia
Lamina propia contain a lot of ____
immune system cells and small blood vessels
Below lamina propia
submucosa
Simple epithelia
have all cells arranged in a single layer or sheet
Stratified epithelia
have more than one layer of cells in which cells of the outer layers do not directly contact the basal lamina.
-Pseudostratified epithelia
are a special case where some cells do not reach the free surface (giving a stratified appearance), but all directly rest on the basal lamina
-Squamous cells
e flattened cells
-Transitional epithelia
(found around the bladder) are a special case: these epithelia are stratified, but when stretched change their shape from cuboidal to squamous, and appear to decrease the layering: this is indicative of a tightly adherent epithelium that is very resilient and stretchable
Key core proteins of tight junctions
occludins and claudins
Adherence junctions contain specific ___ that link to ___ filaments
Cadherins
actin filaments and other signaling proteins
Desmosomes
Promote mechanical strength and resist shearing forces and promote the structural organization of the epithelial sheet
Core components of desmosomes
Cadherins that link to intermediate filaments
Key aspects of epithelial polarity
- plasma membrane composition is locally separated into domains
- Cytoplasm is polarized
endocytosis of substances from one membrane region, followed by trans-cellular transport of the vesicles and their exocytosis from another membrane region
transcytosis
Apical surface modifications
- microvilli
2. cilia
Unusual type of microvillus found in epididymis and sensory cells in ear
stereocilia- not related to cilia
microvilli contain ___, while cilia contain ____
actin
microtubules
Basal laminae are formed by a special type of network- forming ____
collagen
Glycoproteins common to basal laminae
laminins and enactin
Important functions of basal laminae
- They mediate attachment of epithelia to the underlying connective tissue.
- Basal laminae often contribute to selective filtration of substances diffusing to or from the epithelia.
- They are necessary for the establishment and maintenance of epithelial cell polarity.
- They can serve as specific “highways” for the migration of cells through connective tissue.
- They provide a barrier to movement of invading microbes or cancerous cell into other tissues.
- They control the gene expression of cells to affect their proliferation or development.
- They control the development, morphogenesis, and organization of epithelial cells, providing a sort of “tissue scaffolding” function. Thus, they are critical to the repair of epithelial tissue following damage by injury or disease.
Epithelial cells directly connect to basal laminae by attachment of
hemidesmosomes and focal adhesions on the basal surface of epithelial cell to components of the basal lamina
for connections between basal surface and basal lamina
integrins
Different integrins of focal adhesions connect to ____ inside the epithelial cell
Actin filaments
Most, if not all epithelia contain stem cells that
(i) are competent for cell division, (ii) self renew: regeneration of a “mother” stem cell with each division, and (iii) produce differentiated cell types specific to each epithelia.
Stem cell daughters that proliferate themselves
transit amplifying cells
A specific stem cell type, its intermediate progeny, and their differentiated progeny are collectively called
cell lineage
Tarceva (erlotinib)
inactivates the EGF receptor and is commonly used to treat lung and pancreatic cancers).
Two major types of epithelial glands
- exocrine
2. endocrine
Exocrine secrete on the ___ side
apical
Two ways glands secrete
- exocytosis (merocrine or apocrine glands)
2. Total cell disintegration (holocrine glands, secrete entire contents)
Exocrine glands are typically ____
multicellular
Two main components of exocrine glands
- Secretory units
2. Ducts
Secretory units can be organized into bowl or flask-shaped lobules called.. Or tubes
Alveoli or acini
tubular
Ducts
tubular structures that emanate from the secretory units
Glands that possess a single duct are classified as ______ glands, whereas those with multiple branched ducts are called ______ glands.
Simple
Compund
3 general exocrine glands of body tubes
- Mucous
- Serous
- Mixed
During endocrine secretion, hormones must cross ____ and _____ of the wpithelium to reach the blood stream
basal surface
basal lamina
Pemphigus
autoimmune disease in which antibodies are produced against components of desmosomes in skin, leading to extensive blistering
Cancers of epithelial origin
carcinomas
Cancers derived from glandular epithelium
adenocarcinoma
Connective tissue near body surface
Superficial fascia
Function of connective tissue
- To provide mechanical strength and support for the specialized tissues of organs.
- To conduct and control the exchange of nutrients, metabolites, and signaling ligands
- To directly control the behavior and functions of cells that contact the connective tissue matrix (the ECM)
Two classes of cells in connective tissue
- Resident cells of the CT family
2. Immigrant blood-derived cells
6 examples of immigrant blood-derived cells
- lymphocytes- acquired immunity
- macrophages- phagocytosis
- neutrophils and eosinophils- bacterial defense
- mast cells- promote swelling
- Osteoclasts- bone resorption
Components of ECM
(A). Structural fibers which provide mechanical strength and resiliency. (B). A hydrated gelatinous material, called the ground substance, in which the structural fibers are enmeshed.
(C). Numerous other extracellular macromolecules embedded within or diffusing through the ECM.
Most abundant structural fibers of ECM
Collagen
Collagen fibers are formed from ___ intertwined polypeptides, individually called ___
3
alpha chain
3 types of collagen fibers
- Fabrillar
- Fibril associated
- Network-forming
Loose connective tissues contain
thin collagen fibrils that are relatively sparse, and are arranged in irregular lattices.