Nucleic acids and chromosomes Flashcards
Nucleic acids
linear polymers of nucleotides
Nucleotide
Nitrogenous base + Sugar + Phosphate group
Nucleoside
Nitrogenous base + Sugar
How does deoxyribose differ to ribose?
Deoxyribose, lacks an oxygen atom on C2 that is present in ribose, the parent compound
Which nucleotide bases are purines?
Adenine
Guanine
Which nucleotide bases are pyrimidines?
Cytosine
Thymine
How many rings in a purine?
2
How many rings in a pyrimidine?
1
4 nucleotide bases in DNA
A T C G
4 nucleotide bases in RNA
A U C G
What are the complementary base pairs?
A + T
C + G
How many hydrogen bonds between each base pair?
A-T = 2 Hydrogen bonds C-G = 3 Hydrogen bonds, more stable
Structure of DNA
Double helix
Antiparallel strands
Major groove and minor groove
How many bps per helical turn in DNA?
10bp
How wide is DNA strand?
2nm
Phosphodiester link
The 3’-OH of sugar of one nucleotide is linked to phosphate group, which in turn is joined to 5’-OH of adjacent sugar
How is a strand in DNA not symmetrical?
Chain has 2 ends
5’ and 3’ ends
1st nucleotide in a sequence has a free
5’ phosphate
last nucleotide in the sequence has a free
3’ hydroxyl group
In which direction do you write the sequence?
5’ to 3’
What are the 2 chains held together by?
Hydrogen bonds between the bases
How are the groups arranged in a DNA helix?
Deoxyribose and phosphate groups run along the outside with the negative charges outside
Bases point inwards and the flat planes are perpendicular to the helix
What shape is RNA?
Can assume a variety of shapes
Separate DNA strand
Heat or Low Salt
= Melting or Denaturing
Anneal DNA strand
Cool or High Salt
= Re-anneal or Hybridise
Primary structure of DNA
Sequence of bases
Secondary structure of DNA
Double helix resulting from complementary base pairing (A+T, C+G)
When are chromosomes visible?
Just before cell divides
What form are chromosomes in at miotic stage?
Highly condensed
What form are chromosomes in at interphase?
Extended form
Karyotype
An organised profile of someones chromosomes
How many chromosomes in a diploid human cell?
46
What do the 46 chromosomes in a human diploid cell comprise of?
22 autosomal pairs
2 sex chromosomes
Female sex chromosomes
XX
Male sex chromosomes
XY
How can karyotypes be useful?
An abnormal Karyotype can be used as a diagnostic tool
Chromatin
DNA tightly packaged, forming a complex with proteins
During interphase chromatin is more extended.
Further condensation during mitosis produces chromosomes
Nucleosomes
DNA wrapped around positively charged histone proteins with linker DNA between histones
What is the lowest level of packaging?
Nucleosomes
How many bp’s of DNA per nucleosome?
200 bp’s
30nm Fiber
chain of nucleosomes further packed to generate a more compact structure, giving ~40-fold condensation
What is the net result of condensing packing DNA?
each DNA molecule has been packaged into a mitotic chromosome that is 10 000 fold shorter than its fully extended length.