Nucleic Acids Flashcards

1
Q

Types of nucleic acids

A
  1. deoxyribonucleic acid (DNA)
  2. ribonucleic acid (RNA)
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2
Q

Nearly all is found within the cell nucleus

A

deoxyribonucleic acid (DNA)

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3
Q

Its primary function is the storage and transfer of genetic information.

A

DNA

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4
Q

is passed from existing cells to new cells during cell division.

A

DNA

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5
Q

occurs in all parts of a cell.

A

ribonucleic acid (RNA)

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6
Q

It functions primarily in synthesis of proteins, the molecules that carry out
essential cellular functions.

A

RNA

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7
Q

Components of nucleic acids

A
  1. five-carbon (pentose) sugar
  2. phosphate
  3. four heterocyclic amines called nitrogenous bases.
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8
Q

Chemical Composition of Phosphate Group

A

PO43-

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9
Q

Chemical Composition of Sugars

A

2’-Deoxyribose (in DNA) - C5H10O4
Ribose (in RNA) - C5H10O5

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10
Q

Chemical Compositions in Bases

A

Purines (double ring)
Adenine (A) - C5H5N5
Guanine (G) - C5H5N5O

Pyrimidines (single ring)
Thymine (T) (in DNA) - C5H6N2O2
Cytosine (C) - C4H5N3O
Uracil (U) (in RNA) - C4H4N2O2

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11
Q

is an unbranched polymer containing monomer units called nucleotides.

A

nucleic acid

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12
Q

is a three-subunit molecule in which a pentose sugar is bonded to both a phosphate group and a nitrogen-containing heterocyclic base.

A

nucleotide

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13
Q

are produced by the combination of a sugar, either ribose (in RNA) or 2′-deoxyribose (in DNA), with a purine or a pyrimidine base.

A

Nucleosides

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14
Q

difference between the two sugars occurs at

A

carbon 2′

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15
Q

difference between the two sugars DNA and RNA

A

The —OH group present in ribose becomes an —H atom in 2′-deoxyribose.

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16
Q

The prefix deoxy- means

A

“without oxygen”

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17
Q

“pure silver” code

A

Purine A and G

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18
Q

6-membered ring made up of carbon and nitrogen atoms

A

Pyrimidines

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19
Q

Uracil chemical name

A

2,4-dioxypyrimidine

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20
Q

Thymine chemical name (2)

A
  • 2,4-dioxy-5-methylpyrimidine
  • 5-methyluracil
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21
Q

Cytosine chemical name

A

2-oxy-4-aminopyrimidine

22
Q

6 membered ring fused to a 5 membered ring

23
Q

Adenine chemical name

A

6-aminopurine

24
Q

Guanine chemical name

A

2-amino-6-oxypurine

25
nitrogen-containing heterocyclic bases
1. Purines 2. Pyrimidines
26
example of derivative of purine
caffeine
27
example of derivative of pyrimidine
Thiamine (Vit B)
28
derived from phosphoric acid (H3PO4
phosphate
29
the phosphoric acid loses two of its hydrogen atoms to give a hydrogen phosphate ion (HPO4^2−) under what conditions?
Under cellular pH conditions
30
Structural building block of ribonucleotide adenosine triphosphate, highest to lowest
1. Adenosine triphosphate 2. Adenosine diphosphate 3. Adenosine monophosphate 4. Adenosine
31
suffix for purine bases
-osine ex. adenosine, guanosine
32
suffix for pyrimidine bases
-idine ex. cytidine, thymidine, uridine
33
Nucleoside formation
sugar + base
34
Nucleotide formation
nucleoside + phosphate
35
Important characteristics of the process of nucleoside formation. State the first characteristic.
The base is always attached to C1′ of the sugar, which is always in a β-configuration. For purine bases, attachment is through N9; for pyrimidine bases, N1 is involved. The bond connecting the sugar and base is a β-N-glycosidic linkage
36
Important characteristics of the process of nucleoside formation. State the second characteristic.
A molecule of water is formed as the two molecules bond together; a condensation reaction occurs.
37
The prefix ________ is used to indicate that the sugar present is deoxyribose
deoxy-
38
are nucleosides that have a phosphate group bonded to the pentose sugar present.
Nucleotides
39
Important characteristics of the nucleotide formation process: first process
1. The phosphate group is attached to the sugar at the C5′ position through a phosphoester linkage.
40
Important characteristics of the nucleotide formation process: second characteristic
2. As with nucleoside formation, a molecule of water is produced in nucleotide formation. Thus, overall, two molecules of water are produced in combining a sugar, base, and phosphate into a nucleotide.
41
Nucleotide Primary structure
Base l Phosphate------Sugar
42
Nucleic Acid Backbone
Phosphate l Sugar
43
DNA Backbone
Phosphate l Deoxyribose
44
RNA Backbone
Phosphate l Ribose
45
Because the sugar–phosphate backbone of a given nucleic acid does not vary, the primary structure of the nucleic acid depends only on the sequence of bases present.
5′ T–G–C–A 3′
46
Important points about the nucleic acid primary structure: 1.
Each nonterminal phosphate group of the sugarphosphate backbone is bonded to two sugar molecules through a 3′,5′- phosphodiester linkage.
47
Important points about the nucleic acid primary structure: 2.
A nucleotide chain has directionality. (5' end to the 3' end or vice versa)
48
Important points about the nucleic acid primary structure: 3.
Each nonterminal phosphate group in the backbone of a nucleic acid carries a 1– charge. The remaining –OH group is free to exhibit acidic behavior—that is, to produce an H+ ion.
49
Three parallels between protein and nucleic acid primary structure: 1.
1. DNAs, RNAs, and proteins all have backbones that do not vary in structure.
50
Three parallels between protein and nucleic acid primary structure: 2.
The sequence of attachments to the backbones (nitrogen bases in nucleic acids and amino acid R groups in proteins) distinguishes one DNA from another, one RNA from another, and one protein from another.
51
Three parallels between protein and nucleic acid primary structure: 3,
Both nucleic acid polymer chains and protein polymer chains have directionality; for nucleic acids, there is a 5′ end and a 3′ end, and for proteins, there is an N-terminal end and a Cterminal end.