Nucleic acids Flashcards
Nucleotide structure
A nucleotide has 3 components: a pentose (5-carbon) sugar, a phosphate group, and an organic nitrogenous base
Polynucleotides
- Formed by condensation reactions between nucleotides, which form phosphodiester bonds
- They are broken by hydrolysis
- e.g. deoxyribose (DNA) and ribonucleic acid (RNA)
DNA
- The sugar in DNA nucleotides is deoxyribose
- Each DNA nucleotide has one of four bases: adenine (A), thymine (T), cytosine (C), or guanine (G)
Complementary base pairing
- DNA exists as a double helix (i.e. two polynucleotides, running in opposite directions, bounded together)
- The two DNA polynucleotide strands are held together by hydrogen bonds between their bases
- C pairs with G, and A pairs with T
Which nitrogenous bases are purine?
Adenine and guanine
Which nitrogenous bases are pyramidine?
Thymine and cytosine
How many hydrogen bonds are there between A and T?
2
How many hydrogen bonds are there between C and G?
3
RNA
- RNA exists in 3 forms: messenger, transfer and ribosomal - all of which play a role in polypeptide synthesis
- The pentose sugar in RNA is ribose
- Uracil (U) is present instead of thymine (T), meaning it bonds with A
- It has one phosphate group (in a nucleotide of RNA)
- RNA is single-stranded and does not form a double helix
How to extract DNA from plant tissue (practical)
- Grind tissue (to break down cell walls
- Mix with detergent (to break down membranes)
- Add salt (to break hydrogen bonds between DNA polynucleotides)
- Add protease enzyme (to break down proteins surrounding DNA)
- Add alcohol (to precipitate DNA out of solution)
- Remove DNA (which can be seen as white strands below the alcohol layer
DNA replication (8 steps)
- Histone proteins are removed
- The DNA double helix is unwound (by an enzyme called helicase)
- Hydrogen bonds between strands are broken (unzipping; catalysed by helicase)
- Both DNA strands act as template strands
- Free (monomer) nucleotides are activated (phosphate groups are added to them)
- Free nucleotides form hydrogen bonds with bases on the template strands
- C bonds with G, A bonds with T (complementary base pairing)
- Phosphodiester bonds join nucleotides in the new strands (catalysed by DNA polymerase)
What properties does the genetic code have?
- It uses a triplet code (i.e. a sequence of 3 nucleotides, known as a codon, codes for the production of one amino acid)
- The code is degenerate (i.e. in most cases, several codons code for the same amino acid)
Start codon (indicates beginning of a gene sequence)
Methionine
Stop codons (pinpoint the end of a gene)
TAG, TAA, TGA
Transcription (5 steps)
- Helicase unwinds and unzips DNA (but usually only along the base sequence of one gene)
- RNA nucleotides bind to complementary DNA bases on the template (antisense) strand
- RNA polymerase joins RNA nucleotides together with phosphodiester bonds
- A stop codon causes RNA polymerase to detach
- The mRNA molecule detaches from the DNA and leaves the nucleus