- Wave - container provisioning - Fusion - cloud native file system - MultiQC - aggregated analytics from bioinformatics analyses Transparent and efficient integration with these packages and services is one of the key selling points of Nextflow.

Enable compute and/or storage on the cloud - AWS - Amazon S3 Storage - Azure Cloud - Google Cloud - Kubernetes

Used to orchestrate task runtime at shared HPC clusters - Slurm - PBS/Torque - SGE - Flux Framework

Simplify installation of scientific software packages - Conda - Spack

Simplify software development on all sorts of infrastructure - Docker - Podman - Singularity - Apptainer

Nextflow Ecosystem Flashcards by Josh Hurwitz

Seqera Ecosystem

Wave - container provisioning
Fusion - cloud native file system
MultiQC - aggregated analytics from bioinformatics analyses

Transparent and efficient integration with these packages and services is one of the key selling points of Nextflow.

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Cloud Platforms

Enable compute and/or storage on the cloud

AWS
Amazon S3 Storage
Azure Cloud
Google Cloud
Kubernetes

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HPC Job Schedulers

Used to orchestrate task runtime at shared HPC clusters

Slurm
PBS/Torque
SGE
Flux Framework

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Package Managers

Simplify installation of scientific software packages

Conda
Spack

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Container Runtimes

Simplify software development on all sorts of infrastructure

Docker
Podman
Singularity
Apptainer

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Version Control Tools

Enable version tracking of Nextflow pipelines

GitHub
GitLab
BitBucket

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Brainscape's Knowledge GenomeTM

Nextflow Ecosystem Flashcards

Brainscape's Knowledge Genome^TM