Neurotransmission and Modulation Flashcards

1
Q

What is the Nerst Equation?

A

RTln([ionint])/zf ln([ionext])

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2
Q

Describe the structure of pentameric ligand gated ion channels (give examples):

A
  • 5 subunits (2α,β, γ, δ)
  • Each subunit contains 4 sequences (M1-4)
  • M2 region is a pore loop where ligand can attach

Examples: nAChR (excitation); GABAa (inhibition); GlyR (inhibition)

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3
Q

What is the structure of the nAChR channel?

A
  • Pentameric ligand gated ion channel
  • 2 ACh bind to pore loops (on M2 sequence)
  • Allows the passage of cations (Na+, K+, Ca2+)
  • Causes depolarisation and excitation
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4
Q

Name tetrameric ligand gated ion channels and briefly describe their structure.

A
  • Mainly glutamate receptive

Examples: AMPA; Kainate (GluK); NMDA

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5
Q

What is the structure of the Nav channel and why is it significant during depolarisation?

A
  • 4 subunits each with sequences S1-6
  • Pore loop between S5-6 which forms channel
  • S4 is voltage sensitive

Significance:
- Probability of one domain being open is m
- Probability of voltage inactivated domain being open is h
- Therefore total probability is m^3h
- Probability of opening increases with depolarisation

Assumes all the domains are independent (big assumption)

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6
Q

How was the K+ channel discovered?

A
  • ‘Shaker’ mutant in Drosophila acted same as WT exposed to K channel inhibitor
  • Implied channel responsible for K+
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7
Q

Describe current-voltage experiments by Hodgkin/Huxley

A

Transient inward and delayed outward current seen

Ion substitution experiments:
- Determined Na+ caused inward current and resulted in depolarisation
- Determined K+ caused outward current

Channel blocking experiments
- Tetrodoxin blocks Nav channel
- No action potential then stimulated

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8
Q

What is saltatory conduction and how does it work?

A

Depolarisation jumps between nodes leading to faster conduction and lower metabolic load.

Mechanism:
- Raises capacitance due to myelination
- Oligodendrocytes in CNS and Schwann cells in PNS
- Creates elongated local currents

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9
Q

What is the purpose of the hyperpolarisation?

A
  • Prevents antidromic (backwards) travel
  • Increases re-activation rate of deactivated Nav channels
  • Therefore shortens the absolute and relative refractory periods
  • Reduces risk of overstimulation (e.g. epilepsy)
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10
Q

How do action potentials code given they are all-or-none?

A
  • Spike frequency coding (larger current = higher frequency)
  • Pattern of APs (regular/irregular/intrinsic bursts)
  • Width of AP (depending on temperature and kinetics (e.g. KIR slower vs. type A K+ channels)
  • Can be modulated by other chemicals
  • Repolarisation can be accelerated/decelerated (e.g. by Ca2+ channel activation)
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11
Q

What is passive linear integration? (give examples)

A

The combination of all incoming signals in a dendrite, changing the probability of progagating an AP>

Examples:
- EPSPs
- IPSPs
- Morphology (how many synapsing dendrites and amount of branching)
- Shunting inhibition

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12
Q

What is shunting inhibition? What is its use?

A
  • Opening Cl- channels
  • Since Ecl is close to resting potential this does not change membrane potential significantly
  • Decreases change of AP propagating

Use: filters out signal noise since excitatory currents effectively divided by amount of inhibitory input.

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13
Q

Which receptors and molecules result in EPSP and IPSP production?

A

EPSPs: glutaminergic synapses (distal part of dendrites)
- AMPA receptors are rapid
- NMDA type receptors and slower and can be Mg2+ dependent
- Both have intrinsic Na+/Ca2+ channels causing excitatory currents
- Kainite receptors e.g. GLUK4

IPSPs:
- GABAergic or glycinergic at proximal dendrite sites
- Have integral Cl- channel repolarising the cell

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14
Q

What is active integration and what evidence supports it?

A

Dendrites propagating/initiating an AP.

Evidence: simultaneous patch-clamp recordings in soma and dendrites

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15
Q

Where can back propagation occur?

A
  • When Nav1.2 channels present (do not inactivate)
  • For spike timing dependent plasticity.
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16
Q

Contrast neurotransmitters and neuromodulators:

A

Time course of action: NT much faster (ms rather than mins/hrs)

Release-effect coupling: NTs strongly coupled to effect; NMs have 2nd messengers which outlast their release

Information route: NT = specific (one cell to next); NMs = non specific populations

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17
Q

What is a ‘brain state’ and how might it be achieved using neuromodulators?

A

Where activity of nearly all brain altered e.g. asleep or awake state

Using modulators such as DA, NA, SHT, HA which amplify their signals using GPCRs (since only a few cells secrete them).

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18
Q

Describe the structure of an electrical gap junction synapse:

A
  • Tight electrical coupling
  • Each cell membrane has hemi-channels of connexins which are aligned
  • Tetra membrane spanning proteins dock hemichannels in place
  • Synchronises electrical activity so common in interneurons of neocortex
  • Transmission occurs in both directions
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19
Q

How was vesicular release discovered?

A
  • Mepps recorded post-synaptically
  • Always in quanta of a similar size
  • Suggested vesicular release
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20
Q

What roles do glial cells have? (5 points)

A
  • Provide structural support
  • Take up neurotransmitter to stop stimulation.
  • Spatial buffering of K+
  • Metabolic support e.g. astrocyte foot processes which provide lactate for respiration
  • Glutamatergic signalling support
  • Control of channels using gliotransmitters
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21
Q

Give an example of a gliotransmitter and describe its mechanism of action:

A
  • L-serine converted to D-serine
  • By enzyme racemase in glial cells
  • D-serine acts as a co-agonist for NMDA receptors
  • Increasing long term potentiation
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22
Q

Detail the different categories of neurotransmitter and give an example of each:

A

Neuropeptide (8-30 aas):
- Orexins and hypocretins for wakefulness

Small molecules (catecholamines):
- DA, SHT, HA, NA, ACh

Amino acids:
- GABA, glycine, glutamate, asparagine

Gaseous:
- CO, NO
- Not vesicularly contained as can freely diffuse

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23
Q

Where is dopamine produced and what is its main function?

A
  • Substantia nigra
  • For voluntary movement and reward
  • Depletes in Parkinson’s disease
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24
Q

Where is serotonin produced and what is its main function?

A
  • Raphe nucleus
  • Affects sleep-wake cycle and mood
25
Q

Where is histamine produced and what is its main function?

A
  • Hypothalamus
  • For arousal and energy/metabolism
26
Q

How is glutamate synthesised? How is ACh synthesised?

A

Glutamate:
- From α-ketoglutarate or glutamine
- Either in astrocytes or pre-synaptic terminals.

ACh:
- From acetyl CoA by choline acetyltransferase (CAT)
- In mitochondria

27
Q

Detail how the Ca2+ sensitive release mechanism works:

A
  1. Vesicular synaptobrevin spontaneously twists together with terminal SNAP-25 and syntaxin
  2. Synaptotagmin blocks complete zipping of SNAREs until Ca2+ bound
  3. Fusion pore formed, releasing contents.
28
Q

How are vesicles recycled?

A

Kiss-and-run release:
- Partial emptying
- Vesicle engulfed back into cell for recycling

Clathrin dependent:
- Vesicle is clathrin associated
- Clathrin re-forms vesicle after combination with cell membrane

29
Q

Suggest ways in which activity at a synapse is stopped and reset after stimulation:

A

Remove neurotransmitter from cleft:
- Diffusion
- Take into glial cells
- Breakdown

Stop vesicle release:
- Close/inactivate Ca2+ channels
- Deplete vesicle number

Recycle vesicles:
- Clathrin dependent
- Kiss-and-run

Post-synaptic control:
- Stopping secondary messengers

30
Q

Describe the different GABA receptors:

A

GABAa = Ionotropic
- Penatmeric family with Cl- channel

GABAb = metabotropic
- Made from an obligate heterodimer of GABAb1 and GABAb2
- Inhibited by GABA reuptake

31
Q

How do naive GABAa differ from mature GABAa receptors?

A
  • Naïve GABAA channels start excitatory
  • Become inhibitory as expression of KCC2 co-transporter increases
  • Reduces intracellular [Cl-]
32
Q

How are GPCRs activated?

A
  • GDP is displaced and replaced by GTP from α-subunit which dissociates.
  • Conformational change of TM segments 3 and 6 where ‘ionic lock’ is broken
33
Q

How are GPCRs inactivated?

A
  • GTP cleaved (in time) by intrinsic GTPase activity to inactivate
  • Β-arrestin binding of GTP bound GPCR results in endocytosis of receptor (can later be reinstated or recycled by acidification of vesicle)
34
Q

How can the spatial-temporal landscape be changed during signalling plasticity?

A
  • Receptor desensitisation (e.g. phosphorylation)
  • Signalling pathway type (e.g. same receptor attached to Gs or Gi)
  • Density and type of receptor (e.g. receptor internalisation)
  • Gene expression change.
35
Q

What causes Myasthenia Gravis? How can it be treated?

A

Autoimmune disease caused by antibodies against nAChR
- Causes problems at NMJ so weakened muscle movement

Treatment;
- Increased ACh concentration by using AChE inhibitor

36
Q

What causes Parkinson’s disease?

A

Progressive autoimmune disorder of movement with difficulty in initiating and stopping voluntary movements:
- Due to loss of dopamine neurones of the substantia-nigra (SubNR) of the basal ganglia.
- Causes imbalance between indirect and direct pathways of the striatum meaning motor cortex is inhibited.
- Since dopamine reduction causes both reduced stimulation (via D1R receptors) and increased inhibition of movement (via D2R receptors)

37
Q

Describe the direct pathway to stimulate the motor cortex:

A
  • Cortex excites striatum
  • Increases inhibition of substantia nigra by striatum
  • Therefore SubNR reduces inhibitory signals to thalamus
  • Increased movement

Direct pathway is promoted by dopamine binding D1R receptors in striatum

38
Q

Describe the indirect pathway to inhibit the motor cortex:

A
  • Cortex excites striatum
  • Increased inhibition of globus Pallidus
  • GP inhibition leads to excitation of subthalamic nucleus and SubNR
  • SubNR produces inhibitory signals
  • Reduces stimulation of thalamus and hence reduced movement.

Dopamine reduces inhibition of movement by binding to D2R receptors in striatum:
- Dopamine (D2R) inhibits striatal neurons
- GP increases inhibitory signals
- Subthalamic nucleus reduces glutamate (excitatory) release
- SubNR produces less GABA (inhibitory)
- Thalamus more excited hence MORE movement.

39
Q

What are different treatment options to increase Dopamine levels?

A
  • Increase dopamine concentration: e.g. use L-dopa (a precursor)
  • Block dopamine degradation: MAO inhibitors
  • Stimulate dopamine receptors using dopamine mimicry
  • Block reuptake of dopamine (cocaine!)
40
Q

How do glial cells influence signalling at a synapse?

A

Modulation of neurotransmitters:
- Recycling and reuptake (ACh; glutamate-glutamine cycle)
- Reduces metabolic cost and increases speed of recovery

Modulation of environment of synapse:
- Ion homeostasis: must be balanced to allow depolarisation but prevent overexcitability
- Keeps K+ conc low extracellularly
- pH: affects receptor conductance

Synaptic plasticity:
- LTP/LTD: gliotransmitters e.g. D-serine released increases activity of NMDA receptor
- Formation of new synapses and pruning of old.

41
Q

How can synaptic efficacy be changed? [Equation]

A

Total effect of neuron A on B = NPQ

N = number of release sites
P = probability of release
Q = postsynaptic effect of release

Detonator synapses can stimulate post-synaptic AP on their own (Integrative synapses cannot).

42
Q

Describe the mechanisms behind short term potentiation:

A

Frequency dependent short-term plasticity:
- Facilitation (≈50-300ms) (may be due to Ca2+ influx)
- Augmentation (≈7s)
- Post-tetanic potentiation (1 min)

Paired-pulse facilitation: synaptic response to second pair of stimuli is greater (≈300ms)
- Tetanic is due to synaptic modification aiding neurotransmitter release (E.g. residual calcium)
- Post-tetanic potentiation (PTP) – due to protein kinase C activation (increases sensitivity to Ca2+)

43
Q

What are the mechanisms of synaptic depression?

A

Decrease in response following repeated stimulation:
- >30Hz is due to vesicle depletion from active zone
- <30Hz is due to inactivation of presynaptic Ca2+ current

44
Q

What are the mechanisms of long term potentiation?

A

Spike timing dependent plasticity:
- Causal (post-synaptic spike leading to pre-synaptic spike = LTP)/acausal relationship (post-synaptic spike proceeding pre results in LTD (dampens EPSP)
- Effectively gives ‘coincidence detection’ property of synapses as depolarisation occurs to displace Mg2+ and synaptic stimulation via glutamate occurs to activate NMDA

Frequency dependence:
- Tetanisation of input fibres causes LTP in that synapse but LTD in adjacent synapses

45
Q

What are the differences between NMDA and AMPA receptors?

A

NMDA receptors = coincidence detectors (require both depolarisation and glutamate) and allow Na+ AND Ca2+ current. AMPA only require glutamate and allow Na+

46
Q

How does the [AMPA receptors] affect synaptic efficacy?

A

More AMPA = increased efficacy (LTP involves insertion of AMPA)

Presynaptic:
- Unmuting of silent pre-synapses by AMPA addition (previously only NMDA present (blocked by Mg2+ usually))
- AMPA insertion matures synapse by increasing facilitation of future activation and reduction in propagation failure rate
- Reduction of whispering synapses (where glutamate concentration in vesicles too low to stimulate AMPA)

Post-synaptic – increase in responsiveness (no. of receptors or single channel conductance)
- Reduction in ‘deaf’ silent synapses by AMPA insertion

47
Q

How is synaptic efficacy measured?

A

Measured by slope of EPSP:
- Index of synaptic efficacy (internal excitatory current (EPSC) much faster than the potential induced)
- EPSC altered by receptor density, properties and state (active?)

48
Q

What is Hebbian plasticity? What are the three properties which change the rate of its induction?

A

Hebb: “when an axon of cell A is near enough to excite cell B and repeatedly takes part in firing some growth/metabolic changes take place in one or both cells to increase efficiency of A firing B”

Induction depends on;
- Cooperativity: need to stimulate multiple afferent to induce LTP
- Input specificity: only certain target synapses will cause LTP when stimulated individually
- Associativity: weak and strong inputs tetanised together both show LTP

49
Q

What are the mechanisms behind cooperativity and input specificity?

A

Co-operativity = need to stimulate multiple afferents to induce LTP:
- Stimulus must be prolonged to overcome GABAergic inhibition of post-synapse
- Overcoming resistance is difference between short and long term potentiation

Input specificity = only certain target synapses will cause LTP when stimulated individually
- Synaptic tagging of tetanised synapses allows protein synthesis in general cell body to affect only specific synapses stimulated
- Opposing theory is local protein synthesis around stimulated synapse

50
Q

Give examples which demonstrate the impact of neural context on long term potentiation:

A

Cortical/hippocampal network:
- Excitation leads to long term potentiation
- Exocytosis of AMPA

Cerebellar response:
- In cerebellum error signal drives synaptic depression (goal is to REDUCE excitation)
- Responsible for vestibulo-Ocular reflex: retinal slip induces climbing fibre activation (mossy fibre feedback of movement from vestibular organ does not match eye movement causing retinal slip which is the error signal)

51
Q

Detail the mechanism behind cerebellar plasticity

A

Excitation leads to long term depression (goal is to REDUCE excitation):
1. Climbing fibres activate AMPA receptors with complex spike (Ca2+ influx with Na+ spike overlayed)
2. When activated together – parallel fibre via metabotropic glutamate receptors and climbing fibre causing Ca2+ influx
3. Activates protein kinase C –> DAG + PLC
4. Endocytosis of AMPA

(Responsible for vestibulo-Ocular reflex)

52
Q

What experimentation demonstrates the frequency dependence of Hebbian plasticity?

A

Shown by low frequency stimulation (low 1Hz) of homosynaptic Schaffner collateral (in CA1 of hippocampus) leading to homosynaptic LTD.

53
Q

How did experimentation show the existence of silent synapses?

A

Before LTP:
- Synaptic currents at +55mv but not -65mv (glutamate activating NMDA but not AMPA)
- LTP causes appearance of AMPA currents.
- Long term changes require protein synthesis (shown as protein blocker stops LTP (but not STP))

54
Q

How was NMDA participation in spike timing dependent plasticity (STDP) determined?

A

Using NMDA receptor agonists (AP5):
- Removes response (molecular coincidence detection role)
- Both detect pre-synaptic glutamate release (back propagation) and postsynaptic depolarisation

Using MK801 (blocks NMDA pore itself not glutamate binding site):
- Only stops LTD when introduced pre-synaptically (not post)
- E.g. Ocular dominance plasticity in visual cortex (mechanisms like LTP in CA1 hippocampus) blocked by NMDA agonist

55
Q

What is the BCM rule? What are the mechanisms behind it?

A

Plasticity is frequency dependent and HFS input shifts threshold so higher frequencies required to cause further LTP.

Stabilises firing rate between neurons (since plasticity is relative not absolute)

Achieved by:
- Different receptor densities
- Different receptor subtypes (due to different subunit composition)
- E.g. intracellular GluN2 subunits of NMDA receptor
GluN2A > GluN2B = shifts curve right = LTP (mature synapse) but higher threshold
GluN2B > GluN2A = shifts curve left = LTD (immature synapse)

56
Q

Describe experimentation which proves LTP can occur without STP?

A

Causal events lead to strengthening of synapse (see STDP):
- Short-term facilitation: 5-HT induced via CYP-sensitive receptor
- Long-term facilitation: also 5-HT induced by a distinct mechanism via CYP-insensitive receptor – can experience LTP without STP
- Shown by blocking STP using CTP (LTP still occurs)

57
Q

What do the Morris water maze experiments demonstrate about memory dependence on LTP in the Hippocampus?

A

Use rodents swimming in water to find a platform (Morris water maze task) – learn to expect a platform in a specific corner of pool.

Blocking experiments:
- Memory of platform place no longer shown if NMDA receptors blocked (stops LTP)
- Memory not shown if CA1 restricted NMDAR1 knockout mouse
- CaMKII knock-out mouse (more specific than NR1) – again showed no preference

Saturation experiments:

Correlation: inhibitory avoidance training (in CA1)
- Used electrodes to measure LTP
- Harder to induce further potentiation in these neurons when stimulated further (compared to control); suggests already stimulated (BCM rule)

58
Q

How do amygdala fear experiments suggest LTP is involved in memory formation?

A

Auditory stimulus paired with an electric shock – induces behavioural ‘freeze’ when sound heard (requires LTP):

  • Plasticity linked to memory (hippocampal and amygdala connections)
  • Tag AMPA receptor with GluA1 C-tail (injected using a virus) which reduces efficacy
  • Led to significant reduction of fear response after training (less LTP)

Using different pitches of sound (one came with shock (= CS+); one did not (+CS-)
- Sound coupled with shock induced increase AMPA:NMDA ratio in synapses

Erasure of fear memory:
- Using optical stimulation to induce LTD resulted in removal of memory (reversal of LTP)

59
Q

List experimental evidence for NMDA/AMPA involvement in LTP:

A
  • Amygdala fear conditioning experiment with AMPA receptor density measurement (tag with GluA1 C-tail)
  • Morris water maze experiments (blocking/knockout mice for NMDAR or CAMKII)