Mt2 Flashcards

1
Q

What is a big source of fitness variation?

A

Deleterious mutations

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2
Q

What mutations are enriched amongst the rarest alleles in the R species

A

Loss of function mutations- selection should depress the frequency

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3
Q

Heterozygote advantage/overdominance

A

Heterozygote has highest fitness; heterozygote could be unflavored where disease is not prevalent; result in stable/protected polymorphism; will inevitably maintain both alleles

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4
Q

Negative frequency dependent selection

A

Fitness is negatively correlated with frequency (fitness goes down as it becomes more common); rare genotypes are favored by NS; frequency increases then its not rare anymore

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5
Q

Self incompatibility

A

Method to reduce self-fertilization/inbreeding; allergic variation at S-locus

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6
Q

Spatially varying selection

A

Fitness of a phenotype or genotype will vary depending on where it is in some geographic region

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7
Q

Sperm are…

A
  • less energetically expensive than eggs
  • made in much greater numbers
    SO a male’s fitness may be greatly increased as the number of matings increases
    FEMALE MAY SUFFER reduced fitness if she mates with lower quality male
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8
Q

Sexual selection is…

A

A kind of NS (component of); male variance in mating success is often very high

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9
Q

Male fitness

A

Correlated with the number of MATES that a male has

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10
Q

Sexually selected trait properties

A
  • restricted to one sex
  • appear only at sexual maturity
  • may only be present during breeding season
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11
Q

NS and Sexual selection; maximized fitness

A

Selection favors mating displays that maximize a male’s lifetime fitness; may be a compromise between what maximizes survival and what maximize mating success

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12
Q

Where do female preferences come from?

A

May evolve preference due to direct or indirect benefits; ex. high quality territories

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13
Q

Sexual selection on male biology

A

Male genitalia have elaborate morphology; one of the traits that evolves the fastest

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14
Q

“Good genes”

A

Indirect benefit ex.
- females should evolves preferences for male traits that are correlated with high genetic quality
- predicts that male traits are COSTLY and thus “honest indicators” of male quality
- predicts that males preferred by females should sire higher quality offspring

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15
Q

Runaway sexual selection

A

As individuals with the preferred trait are more likely to mate and pass on their genes, the trait becomes increasingly common in the population, even if it may be impractical or even detrimental in terms of survival. male traits could become so extreme that natural selection pushes back

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16
Q

Feedback loop and female preference

A

female that are expressing preferences for more and more exaggerated traits are mating with males who have those traits

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17
Q

Inbreeding effect on populations that experienced sexual selection

A

Not go extinct as quickly; more intense sexual selection has EXPOSED DELETERIOUS mutations that aren’t exposed when its not present; more chances for these mutations to be erased

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18
Q

Do traits evolve for the good

A

Not always expected to evolve for the good

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19
Q

Group selection

A

Trait occurs and the expression of it is bad for the individual, but good for others in the species

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20
Q

Williams idea

A

if you have a population composed entirely of selfish individuals it will give rise give right to a population composed of selfish individuals and may go extinct

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21
Q

In group selection…

A

Group heritability is likely low
More birth/death of individuals than groups per unit time

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22
Q

Kin selection

A

An apparently altruistic act is associated with a fitness cost to the actor and a fitness benefit to the recipient

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23
Q

Hamilton’s rule for when altruistic traits will evolve

A

Rb>c
R=degree of relatedness between actor and recipient
B=benefit to recipient
C=cost to actor

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24
Q

Species selection

A

differential survival and proliferation of entire species based on their characteristics and traits, rather than just individual organisms within those species. It operates on a similar principle to natural selection but operates at a higher level of biological organization.

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25
Q

Advantage of asexuality

A
  1. Asexual females will quickly replace sexual females
  2. An allele that suppresses meiosis will be transmitted to ALL OFFSPRING rather than just half
  3. An asexual female passes on all of her genes to each offspring rather than only half her genes
26
Q

Does asexual taxa last

A

Appear to arise frequently (in some organisms) but do not appear to persist for very long

27
Q

What does asexual reproduction slow down

A

Slows down adaptive evolution and leads to higher probabilities of extinction

28
Q

How is recombination better

A

Sex can increase the efficiency of all kinds of natural selection; spread of beneficial mutations and the removal of deleterious mutations; increases rate at which adaptive evolution can occur

29
Q

Muller’s ratchet

A

With no recombination, deleterious mutations can accumulate over generations, leading to a genetic load- continue to carry harmful mutations

30
Q

Individual selection arguments for maintenance of sex

A
  1. G.C Williams balance argument : there must be genetic variation for suppressed sex. Given major advantage for asexuality we would expect asexuality to fix. Since sex continues, sex must have a short-term advantage.
  2. Sib competition
  3. Lottery model- asexuals can only succeed in narrowly defined niches (in unpredictable environments, producing the diverse group of offspring genotypes could be beneficial)
31
Q

Sib competition model

A

asexual females produce clones of themselves, so all daughters have the same genotype and competing for each other for resources; better to have diff genotypes so that they aren’t competing with eachother

32
Q

Lottery model

A

Maybe better to produce an array of different offspring genotypes because maybe one of the genotypes will be better suited to fit the change in environment that is probably going to be different from the mother’s environment
Unpredictable environment, more likely to get lucky that a variation will work

33
Q

Red queen hypothesis

A

Host and parasite are tracking each other
Host has to adapt as quick as possible to stay in same place
Host evolving immune system to keep up with rapidly evolving parasites
Sexual female fitness is usually higher than in asexual females

34
Q

Frequency of new allele in N haploids

A

1/N

35
Q

Genetic drift

A

Genotypic variation is neutral; theory applies primarily to molecular data; not a result of natural selection; WHAT HAPPENS IN ONE GENERATION HAS NO EFFECT ON THE NEXT GENERATION

36
Q

Are fluctuations larger in smaller or larger populations

A

Larger in smaller populations; pq/2N

37
Q

How is heterozygosity lost in populations

A

Lost faster in smaller populations; rate of loss is 1/2N per generation

38
Q

What is the fixation probability

A

0.5= starting frequency

39
Q

Frequency of brand new allele

A

1/2N

40
Q

Expected time to fix

A

4N generations

41
Q

Allele frequency movement in large populations

A

Dont move around very much from one generation to the next

42
Q

Genetic variation

A

Diversity of alleles and genotypes within a population

43
Q

Drift results in…

A

The accumulation of genetic differences among populations

44
Q

Effective population size

A

Describes the rate at which drift would occur in a population of size Ne

45
Q

If N fluctuates over T generations

A

1/Ne

46
Q

Effect of population bottlenecks on polymorphism

A

Rare alleles likely to be lost; heterozygosity may be reduced

47
Q

Mutation-drift equilibrium

A

Rate at which variation lost by drift= neutral variation introduced by mutation

48
Q

Randomly selected pair of alleles

A

Expected coalescent time is 2N generations

49
Q

Coalescent time

A

Time it takes for two randomly chosen alleles in a population to converge to a common ancestral allele

50
Q

Neutral theory of molecular evolution

A

Most new mutations are deleterious
Most observed molecular variation is neutral
Rate of evolution between species is equivalent to neutral mutation rate
The neutral mutation rate is a reflection of functional constraint
Polymorphism is a transient phase of divergence between species

51
Q

Neutral theory of molecular evolution; frequency of new mutation

A

1/2Ne

52
Q

Neutral theory; total # new mutations

A

2 Ne u

53
Q

Why are most new mutations in proteins deleterious; explained by drift

A

Deleterious more common than beneficial, and under weak selection pressure, genetic drift can allow them to persist and accumulate

54
Q

If there is no polymorphism

A

There is no evolution

55
Q

There are less new mutations in smaller populations but

A

Each has a higher probability of fixing

56
Q

Functional constraint

A

amino acid at that residue is critical to function

57
Q

Heterozygosity

A

2NeU

58
Q

Higher mutation rate

A

Greater rate of divergence between species; more polymorphism

59
Q

Pseudogene

A

gene copies that are dead- become nonfunctional
derived from real genes
looking for something that is under no functional constraint? Prob look at pseudogenes
Evolving at ACTUAL underlying mutation rate

60
Q

“Free of constraint”

A

No selection acting on them

61
Q

Why do some proteins evolve faster than others?

A

Functional constraint
adaptive evolution

62
Q

How is translation affected by codons matching rare tRNAs

A

Leads to slower translation