MR Flashcards
What percentage of a biological membrane is lipid, carbohydrate and proteins?
40% lipid, 60% protein, 10% carbohydrate
What accounts for 20% of the total weight of a biological membrane?
Water to maintain the hydrophilic interactions that create the bilayer
Name the 3 types of lipid that are involved in membrane formation.
Phospholipids, sphingomyelin, glycolipids
Describe the structure of a phospholipid.
Central glycerol backbone, two fatty acids attached. Phosphate group attached to 3rd carbon of the backbone which is attached to a polar head group.
What 4 molecule types can the polar head group of a phospholipid be?
Amine, amino acid, choline or sugars
How long are the fatty acid chains of a phospholipid?
14-24 carbons (16 and 18 most common)
What is the difference between a phospholipid and sphingomyelin?
Sphyngomyelin lacks the glycerol backbone
What is the structure of a glycolipid?
Similar to sphingomyelin but the phospho-head group moiety is replaced with a sugar
What is the difference between a cerebroside and ganglioside?
Cerebroside = a glycolipid with a single sugar residue (a monomer) Ganglioside = a glycolipid to multiple sugar residues (a polymer)
What type of bond is formed between the hydrophobic tails of lipids in a bilayer?
Van Der Waals
What are the 4 modes of movement of a phospholipid in a bilayer?
Flexion (fatty acid tails move side to side).
Rotation (phospholipid turns round on the spot).
Lateral diffusion (phospholipids move along their lamellae swapping with their neighbours).
Flip flop (change from one Lamellae to another).
Why is flip flop of phospholipids rare?
Because the polar head group has to pass across the hydrophobic core of the membrane
What maintains fluidity of the membrane?
One of the fatty acid chains of the phospholipids contains a cis double bond. Causes a kink in the chain and pushes neighbouring phospholipid away allowing more movement of phospholipids.
45% of the total membrane lipid is what?
Cholesterol
How and when does cholesterol decrease fluidity?
Decreases fluidity at high temperatures.
Uses its polar OH head group to form hydrogen bones with C=O groups of phospholipid molecules. This places the rigid central ring structure of cholelsterol next to the fatty acid tails of the phospholipid to limit their movement.
What reduces the ability of heat to increase membrane fluidity?
Cholesterol
When ones cholesterol increase membrane fluidity and how?
Increases fluidity at low temperatures.
Does this by spacing out phospholipids in the bilayer so they cannot pack tightly together.
What is the functional evidence of the presence of membrane proteins?
Facilitated diffusion, ion gradients and cell responses occurring at membranes
How does membrane fractionation give evidence of proteins in a membrane?
Spinning of a cell in a centrifuge forms a white pellet of only membrane which can be run on a gel electrophoresis to separate out the proteins.
Explain the freeze fracture technique of membranes and what it is used for.
Cell is frozen and broken up using a knife to separate the two Lamellae of the membrane. Transmembranous proteins remain with one lamellae only and this surface can be visualised under the electron microscope.
Evidence of protein presence in membranes.
How are peripheral proteins attached to membranes? And therefore what can cause their removal?
Bound with electrostatic or hydrogen bonds.
PH and ionic strength can cause their dissociation.
How do integral proteins interact with the lipid bilayer?
How are they removed?
With the hydrophobic domains of the bilayer.
Removed with detergent or organic solvents only.
Ionic strength and pH manipulation of a membrane will remove which type of protein?
Peripheral only (not integral)
Which amino acids are you likely to find in the hydrophobic domain of a transmembrane protein?
Glycine (small), alanine, cysteine (hydrophobic), histidine (polar uncharged)
What is a hydropathy plot used for?
Screening of proteins for clusters of hydrophobic amino acids to determine whether they are transmembrane proteins and how many times they cross the membrane.
Other than having a hydrophobic region, how else might an integral protein be anchored to the membrane
Post-translational modification by the addition of a lipid molecule
What modes of action can proteins do?
Conformations change, lateral diffusion, rotation
Why can membrane proteins not perform flip flop?
Membrane proteins getting across the hydrophobic core is not energetically favourable
How can protein movement in a membrane be restricted?
Proteins form aggregates that bind to one another, they can tether to the basement membrane extracellularly or to the cytoskeleton intracellularly, they can form interactions with proteins on other cells.
What are the 5 functions of a biological membrane?
- Selectively permeable barrier
- Create an enclosed, controlled chemical environment
- Communicate with outside of cell or organelle
- Recognise signalling molecules, adhesion proteins and immune molecules
- Signal generation
What is spectrin?
A cytoskeletal protein that lines the intracellular side of the plasma membrane.
What are the names of the 2 integral proteins of the membrane that form interactions with the cytoskeleton?
Band 3 and Glycophorin A
What 2 peripheral, intracellular proteins do band 3 and glycophorin integral proteins bind to anchor the cytoskeletal spectrin to the membrane?
Band 3 binds Band 4.9
Glycophorin binds Band 4.1
Describe how the cytoskeleton is grafted onto the membrane.
Spectrin cage binds intracellular proteins band 4.1, adducin and actin. Band 4.1 and ankyrin (band 4.9) act as peripheral proteins and bind integral proteins glycophorin A and band 3 respectively.
Describe how membrane protein mutations can cause haemolytic anaemias.
Mutations in spectrin and other proteins that anchor the cytoskeleton to the plasma membrane can cause abnormally shaped erythrocytes that are prone to lysis
How are membrane proteins being translated in the cytosol first recognised?
Membrane proteins contain a hydrophobic signal sequence that is recognised by a signal recognition particle in the cytoplasm.
What is the role of signal recognition particle in membrane protein translation?
Binds to the hydrophobic signal sequence in the cytosol to prevent further translation, targets the ribosome and protein to the ER by binding a docking protein. SRP is then released so that translation can continue.
Is the membrane protein hydrophobic signalling sequence N or C terminal? And is it cleaved or not within the ER lumen?
N terminal
Cleaved
How do membrane proteins become anchored in the ER membrane?
They contain an 18-22 hydrophobic amino acid sequence directly followed by charged amino acids. This sequence acts a stop transfer sequence during translation as it is more energetically favourable for it to remain within the membrane.
Where is translation completed in translation of membrane proteins?
In the cytosol after the stop transfer sequence has been reached and the ribosome detaches from the ER.
What orientation are membrane proteins in?
C terminal in cytosol.
N terminal extracellularly.
(Same orientation as in ER membrane during translation)
Why can oxygen, CO2, nitrogen and benzene cross a lipid bilayer?
Because they are hydrophobic molecules
Explain why water, urea and glycerol can cross a pure lipid bilayer but glucose cannot?
Water, urea and glycerol are small uncharged polar molecules, whereas glucose is much larger and would require a much larger free energy change.
Give an example of a ligand-gated ion channels that closes on ligand binding.
ATP-sensitive K+ channel in beta cells of pancreas
How do voltage gated ion channels work?
When the electrical potential across a membrane changes, it changes the charges on the amino acids of the protein. This causes conformational change in the protein and channel opening (or closing).
What causes gap junction / connexins to close?
Intracellular calcium concentration of more than 10uM or acidic intracellular solution
What is the mechanism employed by membrane transport proteins?
Ping-pong transport - binding of a substrate on one membrane surface, conformational change to release the substrate on the other side of the membrane.
Why can flip flop and rotating carrier not be mechanisms for membrane transport proteins?
Thermodynamically unlikely for proteins to cross hydrophobic core of membrane.
What are the intra and extracellular concentrations of sodium?
Intracellular = 12 mM Extracellular = 145 mM
What are the intracellular and extracellular concentrations of potassium?
Intracellular = 155 mM Extracellular = 4 mM
What are the intracellular and extracellular concentrations of calcium?
Intra = 10^-4 mM Extra = 1.5 mM
What are the intra and extracellular concentrations of chloride ions?
Intra = 4 mM Extra = 123 mM
Is the concentration of other anions (A-) higher intracellularly or extracellularly?
Intracellularly
What ‘other anions’ are present in addition to chloride?
Bicarbonate, phosphate, amino acids
What is the gradient of calcium ions across the cell membrane?
20,000 fold
Define passive diffusion.
The ability of a molecule to diffuse across a phospholipid bilayer with no energy requirement. Dependent on permeability and concentration gradient.
Define active transport.
Transport of ions or molecules across a membrane using proteins against unfavourable concentration and/or electrical gradients. Requires energy from ATP either directly or indirectly.
What is the difference between primary and secondary active transport?
Primary active transport directly couples ATP hydrolysis to a movement of ions or molecules across a membrane against an unfavourable electrochemical gradient.
Secondary active transport is where the transport of one substance against an unfavourable electrochemical gradient is coupled to the free energy release of moving another molecule down its electrochemical gradient.
What type of graph will facilitated diffusion have with substrate concentration and why?
Michalis menten curve as eventually all proteins will become saturated with substrate.
What is co-transport?
More than one molecule or ion is transported by a membrane transporter across a membrane in one reaction cycle.
Symport is..
2 or more ions or molecules are transported across a lipid bilayer in the same direction using a membrane transport protein.
How many sodium and potassium molecules are moved by the sodium pump?
3 Na+ out of cell
2 K+ into cell
How many mV of the resting membrane potential are contributed to by the sodium pump?
5mV only
What is the most crucial role of the sodium pump?
Formation of sodium and potassium gradients (important for secondary active transport and membrane excitability)
What is 25% of the BMR used by?
The sodium pump
What is meant by the sodium pump being a ‘P-type ATPase’?
ATP hydrolysis transfers a phosphate directly to the protein on an aspartate residue to cause a conformational change.
What is the structure of the sodium pump?
Alpha and beta subunits. Alpha is the active part (binds Na+, K+ and ATP and carries out transport). Beta just directs to membrane after synthesis.
Name a molecule that inhibits the sodium pump.
Ouabain
What is the PMCA?
The plasma membrane calcium ATPase.
Couples the hydrolysis of ATP to the outward movement of one calcium ion.
PMCA has a *** affinity but ** capacity for calcium.
High affinity but low capacity - good for getting last few calcium ions when levels are near to resting
What is the NCX?
Sodium-calcium exchanger.
Couples the movement of 3 sodium ions down their electrochemical gradient to the outward movement of a single calcium ion.
Why is the NCX thought to have a role in ischaemia and reperfusion injury?
When the cell becomes depolarised the NCX switches direction. During ischaemia there is no ATP and the sodium gradient is not maintained (by sodium pump), depolarisation occurs and the pump reverses. Pumping calcium into the cell can cause a high intracellular calcium level which is toxic.
NCX has a *** affinity but ** capacity for calcium.
Low affinity but high capacity - good for clearing out calcium levels when high
Explain why NCX is important n the cardiac action potential.
As it reverses its mode of direction on depolarisation, it is important for the calcium influx in cardiac action potentials.
What is SERCA?
Sarco(endo)plasmic reticulum calcium ATPase.
Couples the hydrolysis of ATP to the inward movement of calcium into the ER with the outward movement of a single proton.
SERCA has a **** affinity but ***** capacity for calcium.
High affinity but low capacity - same as PMCA. Clears remaining calcium after NCX.
What is NHE?
Sodium-hydrogen exchanger.
Couples the movement of a single sodium ion down its electrochemical gradient to the outward movement of a single proton.
Is NHE electrogenic?
No - moves a single positive charge in and out
What is the importance of NHE being activated by growth factors?
Growth factors simultaneously activate metabolism which causes a rise in H+. Activation of NHE at the same time to remove it.
What is the AE cotransporter?
Anion Exchanger - couples outward movement of HCO3- to the inward movement of Cl- down it electrochemical gradient.
Does AE acidify or alkalify the cell?
Acidifies as removing bicarbonate ions
Name 3 cellular processes for which calcium signalling is required.
Fertilisation, contraction, secretion
Name the 5 transporters involved in intracellular calcium regulation.
- NCX
- PMCA
- Sodium Pump
- SERCA
- Calcium uniporters (in mitochondria)
Which transporter clears most of the calcium out of a cell after calcium influx?
NCX - low affinity, high capacity
What is the role of calcium uniporters in intracellular calcium exchange?
Found in the mitochondria and transport calcium into mitochondria down its electrochemical gradient when intracellular levels are near pathological.
Name the 2 transporters activated in an acidic cell and a third that is also crucial to the process.
NHE - sodium hydrogen exchanger
NBC - sodium bicarbonate co-transporter
Sodium pump - to establish sodium gradient.
What is NBC and when is it activated?
Sodium bicarbonate co-transporter. Couples inward movement of a single sodium ion down its concentration gradient with inward movement of 3 bicarbonate ions.
Activated in an alkaline cell.
Name the one transporter activated in a basic cell.
AE - anion exchanger. Couples the inward movement of chloride ion down its electrochemical gradient with the outward movement of a bicarbonate ion = eliminating base.
In general terms, in order to resist cell swelling, what must the cell do?
Extrude ions so that water follows
In general terms, in order to resist cell shrinkage, what must the cell do?
Influx ions
Describe mechanisms employed to resist cell swelling.
Efflux of chloride and potassium ions through open channels.
Efflux of amino acids.
Co-transport of chloride and potassium ions out of the cell.
Influx of H+ coupled to efflux of K+ & AE Co-transporter. H+ and HCO3- can join to form CO2 and water and diffuse out.
Describe mechanisms employed to resist cell shrinkage.
Influx of sodium and calcium ions through opened channels.
Influx of sodium and chloride co-transport
Inward flow of sodium with organic osmolytes co-transport
NHE & AE due to breakdown of H2CO3 from CO2 and water.
Sodium pump to maintain sodium concentration.
Where is bicarbonate normally reabsorbed in the kidney and how much?
In the proximal tubule - usually all bicarbonate ions
Describe renal bicarbonate absorption.
NaHCO3 in the tubule lumen. Breaks down into Na and HCO3-.
Na taken up by NHE.
H+ and HCO3- in lumen join to form CO2 and H2O by carbonic anhydrase.
Diffuse across and reform inside cell (into H+ and HCO3-).
HCO3- expelled on basal cell surface via AE.
H+ re-expelled by NHE on apical surface.
Sodium pump required on basal surface to maintain sodium gradient.
What is the name of the enzyme that converts H2CO3 to H2O and CO2 and visa Versa?
Carbonic Anhydrase
What is the first line treatment for mild hypertension?
Diuretics - prevent renal sodium reuptake to reduce water reabsorption and blood volume.
When using diuretics, will urine be hypo or hyper osmotic?
Hyper osmotic as sodium reabsorption is reduced so more in the urine
Describe the process of sodium handling by the thick ascending limb of the kidney (5 crucial ion transporters).
- NKCC2 –> co-transport of 1 Na+, 1 K+ and 2 Cl- into the cell.
- ROMK –> potassium leak channels in apical membrane.
- Sodium pump –> in basal membrane to maintain sodium gradient.
- Chloride channels –> in basal membrane to remove chlorine ions.
- KClCT –> potassium-chloride co-transporter on basal membrane.
In renal sodium handling, what happens to the sodium ions?
They are reuptaken
Which part of the kidney do loop diuretics target and which channel in particular?
Thick ascending limb of proximal tubule. Inhibit NKCC2 (sodium reuptake)
Which part of the kidney do thiazides target and which channel in particular?
Distal convoluted tubule.
Inhibit sodium-chloride co-transporter (sodium reuptake)
Which parts of the kidney do amiloride diuretics target and which channel?
Distal convoluted tubule and cortical collecting duct.
Target/inhibit ENaC channel - epithelial sodium channel in apical membrane.
Which part of the kidney is targeted by spironolactone and how?
Targets the cortical collecting duct indirectly by acting as an aldosterone receptor antagonist. Aldosterone would normally act to up regular ENaC expression.
What diameter does a micro electrode have?
How is a membrane potential measured?
using a micro-electrode to penetrate the cell membrane and a second electrode on the cell surface. Electrodes filled with conducting solution and voltmeter measures the potential differences between the two electrodes.
Resting membrane potentials varying from ** to ** depending on **.
Form - 20mV to -90mV depending on cell type.
What is the equilibrium potential for an ion?
The membrane potential at which the electrical and chemical gradient for an ion is balanced across the membrane so that there is no net flow of ion across that membrane.
What is the Nernst equation?
Used to calculate the equilibrium potential for an ion.
= 61/z X log10([conc]o/[conc]i)
What is the approximate equilibrium potential for potassium?
-95mV
What is the equilibrium potential for chloride?
-96mV
What is the equilibrium potential for sodium?
+70mV
What is the equilibrium potential or calcium?
+122mV
Why is the resting membrane potential not at the equilibrium potential for potassium?
Because the membrane is no solely permeable to potassium ions - occasionally a sodium or calcium ion will leak moving the membrane potential towards their equilibrium potential (I.e. More positive)
What is the normal resting membrane potential for the following tissues: cardiac muscle, nerve cells, smooth muscle cells, skeletal muscle
Cardiac muscle = -80mV
Nerve cells = -70mV
Smooth muscle cells = -50mV
Skeletal muscle cells = -90mV
What is the resting membrane dependent on?
The membrane permeability to different individual ions and their equilibrium potentials.
What equation takes into account the different permeabilities of the membrane to ions?
Goldman-Hodgkin-Katz equation
What is the definition of depolarisation?
A decrease in the size of the membrane potential from its normal value - meaning that the cell interior becomes less negative.
What is the definition of hyperpolarisation?
An increase in the size of the membrane potential from its normal value, meaning that the cell interior becomes more negative.
In what 3 ways can ion channel activity be controlled?
Ligand gated, voltage gated, mechanically gated
What triggers mechanical gating of an ion channel?
Membrane deformation - e.g. Stretch receptors
As well as membrane permeability to ions, what two factors can influence membrane potential?
- Ion concentration on either side of the membrane
2. Electrogenic pumps (e.g. Sodium pump)
Synaptic transmission can be broken down into…
Fast and Slow
What is fast synaptic transmission?
Where the receptor at the post-synaptic membrane is also an ion channel where binding of the ligand to receptor causes channel opening
What does ‘EPSP’ and what causes them?
An excitatory post-synaptic potential caused by opening of cation ligand gated channels that cause depolarisation.
What is the difference between ESPCs and action potentials?
ESPCs are depolarisation at the post-synaptic membrane that have a much greater time course that action potentials and are graded with the amount of transmitter.
What is an IPSP and what causes it?
An inhibitory post synaptic potential caused by opening of ligand gated ion channels at the post-synaptic membrane that cause hyperpolarisation of the cell.
Give 2 examples of neurotransmitters that cause inhibitory post synaptic potentials.
Glycine and GABA
What is slow synaptic transmission?
The receptor on the post-synaptic membrane and the ion channels that cause the changes in membrane potential are separate proteins That must communicate directly or through a second messenger.
The neuromuscular junction is an example of fast or slow synaptic transmission?
Fast
Why does the membrane potential become more positive in the neuromuscular junction despite nicotinic ion channels allowing both K+ and Na+ ions through.
The permeability to both ions is increased and so the membrane potential moves towards 0mV - between the sodium and potassium equilibrium potentials.
How do we know that neurotransmitter release is calcium dependent?
Hypocalcaemia (decreased external calcium & reduced gradient across the membrane) result in a decreased amplitude of end plate potential
What is the cause of miniature end plate potentials (MEPPs)?
Spontaneous release of individual neurotransmitter vesicles at a synapse. (
What is Myasthenia Gravis?
An autoimmune disease that targets nicotinic ACh receptors via complement mediated lysis and receptor degredation. Results in muscle weakness due to reduced amplitude of end plate potentials.
What is the pore-forming subunit of sodium and calcium channels?
The alpha subunit
How many subunits do calcium channels have?
5 - 2 alpha, 1 beta, 1 gamma and 1 delta
How do different calcium channels vary?
In location and inhibitors
Where are L type calcium channels found?
Muscle, nerves and lungs.
What are L type calcium channels blocked by? What are these used to treat?
Dihydropyridines. Used to treat hypertension.
Describe neurotransmitter release from a neurone.
- Calcium enters through calcium channels following depolarisation
- Calcium binds to synaptotagmin on neurotransmitter vesicles.
- Brings vesicle close to the membrane where they bind SNARE complexes.
- SNARE complexes make a fusion pore allowing the inside of the vesicle to become continuous with the extracellular space.
How many ACh binding sites does each nicotinic receptor have?
2
Each fusion pore than a SNARE complex makes releases how much neurotransmitter?
300nm
To what membrane potential does the membrane depolarise at a neuromuscular junction during an end plate potential?
-10mV
What is the structure of a nicotinic receptor?
2 alpha, beta, 1 gamma and 1 delta subunit
What does tubocararine inhibit? Explain how it works.
Inhibits nicotinic ACh receptors. A competitive blocker with a similar structure to ACh. Binds without causing a conformational change in the protein. Since ACh can no longer bind, the channel cannot be opened and paralysis occurs.
Explain how succinylcholine acts as a nicotinic receptor blocker.
A depolarising blocker - binds and opens the channel but binds with such high affinity that the channel remains open. Causes inactivation of sodium channels adjacent to end plate and receptor desensitisation. Results in paralysis.
In what 5 ways is the low resting calcium concentration maintained?
- Relative impermeabililty of the membrane to calcium
- Calcium expulsion by PMCA and NCX
- Calcium buffers
- Trigger proteins
- Intracellular calcium stores
Name 3 calcium buffers and explain how they work.
ATP, calsequestrin and calbindin.
Bind to intracellular calcium and limit its diffusion.
What are trigger proteins?
Give 3 examples.
Proteins that bind to free calcium ions in the cell, and in response alter their function.
Synaptotagmin, calmodulin & troponin
By what 3 channel types is the membrane permeability to calcium increased during calcium influx?
- Voltage gated ion channels (VOCCs) - open due to membrane depolarisation.
- Receptor operated ion channels (ROCCs) - ligand gated (e.g. Glutamate or nicotinic).
- NCX reversing its mode of action due to a local increase in sodium concentration
In addition to increased membrane permeability, how else can calcium influx occur?
Release from rapidly releasable intracellular stores
Which protein increases the capacity of the ER to store calcium?
Calsequestrin
Calsequestrin has a ** affinity but *** capacity for calcium.
Low affinity but high capacity
Where are calcium release channels found and what stimulates them to open?
In the ER membrane - opened by IP3 causing a conformational change.
What is meant by ‘calcium induced calcium release’?
Calcium influx through VOCCs or intracellular stores. Calcium itself binds to ryanodine receptors in the ER membrane causing a conformational change in receptor and opening of aqueous pore. Further release of calcium.
What other molecule than calcium is thought to be able to open ryanodine receptors in cardiac muscle?
CADP ribose.
How is release of calcium from intracellular stores triggered in skeletal muscle?
Through mechanical coupling of VOCCs to ryanodine receptors in the ER - conformational change in VOCCs is passed along.
How much of the calcium in muscle contraction comes from intracellular stores and how much from the extracellular fluid?
85% from intracellular stores and 15% from extracellular fluid
What is meant by a ‘microdomain’ in calcium regulation? What is their function?
An area of intracellular calcium concentration that are in excess of that measured globally. E.g. Around an open channel.
Allows some calcium-dependent processes to occur that require a very high calcium concentration without causing toxicity.
Where are non-rapidly releasable stores of calcium found?
How do they take up calcium?
In the mitochondria = calcium uniporters that only work at extremely high calcium concentrations.
Use the enters from the respiratory chain proton production to uptake calcium.
In what cell type are non-rapidly releasable stores of calcium in the mitochondria particularly important?
Neurones
What 2 factors allow for prolonged depolarisation in cardiomyocytes?
The fact that calcium channels become inactivated much more slowly that sodium. And there is a low potassium conductance.
What is the equation for converting between molarity (molar concentration), g/L and molecular weight.
Molarity (M) = g/L / MWt
Why do drug concentrations always need to be in molar concentration?
Molar concentration refers to the number of particles in 1L.
Whereas the number of grams in a L cannot be compared between drugs because drugs weigh different amounts.
Define drug affinity.
The ability to bind and the strength of association between drug and receptor.
What is the intrinsic efficacy of a drug?
How well an agonist generates the active conformation of the receptor.
Define ‘efficacy’ of a drug.
The ability of a drug, and how good it is, at generating a response.
What 2 things is the efficacy of a drug dependent on?
Dependent on intrinsic efficacy and cell dependent factors.
Define agonist.
A drug that interacts with an mimics the effects of the endogenous ligand.
Define an antagonist.
A drug that interacts with a receptor and blocks the effects of the endogenous ligand.
Out of affinity, intrinsic efficacy and efficacy, which does an antagonist have?
Affinity only
What is Kd?
The dissociation constant. A measure of affinity - the concentration of drug that occupies 50% of receptors.
If the concentration of drug A is its Kd and there are 60 receptors, how many will be occupied? What about if there are 500 receptors?
30 receptors occupied if 60 present.
250 receptors occupied if 500 present.
What is the shape of the graph if a [drug]-response graph is a normal scale?
Hyperbola
What is the shape of the graph if a [drug]-response graph is a log scale?
Sigmoidal
On a log scale, how much is the Y axis increasing by with every value?
10 fold.
E.g. 10-9 = 1nm
10-8 = 10nm
What is the difference between a concentration-response and dose-response graph?
Concentration-response graph refers to an individual cell so that the concentration of drug at the target site is known. A dose-response graph refers to the response of the animal or tissue as a whole so that the concentration at the target site is not known.
Log(a)X = ***** A^B = ******
Log(a)X = B A^B = X
What is the definition of EC50? What is it a measure of?
The effective concentration giving 50% of maximal response.
A measure of potency.
Define potency.
The amount of drug required to give a given response.
What makes EC50 different to Kd?
It is influenced by the number of available receptors.
On a concentration-response graph of 2 drugs, which has the greatest efficacy?
The one with the greatest Emax value.
On a concentration-response graph, which has the greatest potency?
The one with the greatest EC50 - usually the one furthest to the left.
Define IC50.
The inhibitory concentration giving 50% of maximal inhibition.
If 3 agonists have the same Emax values on a graph, which has the greatest efficacy?
The one furthest to the left (also the one with the greatest potency)
What is the specificity of a drug?
Whether the drug has one effect at one receptor site.
What is selectivity of a drug?
The concentration range at which a drug acts on a single receptor site only
What 3 things is selectivity dependent on?
Affinity of drug for receptor type, efficacy of the drug at a specific receptor and route of administration
Why is Salbutamol used despite being poorly B2 selective?
Selectivity enhanced by route of administration and B2 selective efficacy