Molecular Biology & Cancer Therapies Flashcards

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1
Q

What are some examples of gene therapies?

A
  • Gene repair; correction of mutations
  • Pro-drug metabolising enzyme therapy to sensitise cancer cells to cytotoxics
  • Viral oncolysis; viruses that selectively target cancers
  • Modification of the tumour microenvironment
  • Drug resistance therapy for non-cancerous cells (allow high dose cytotoxic use)
  • Immunotherapy w/GM effector T cells, APCs
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2
Q

What barriers have there been to cancer gene therapy?

A
  • Commercial

- Biological

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3
Q

What commercial barriers are there to gene therapy?

A
  • Costs for materials high; R&D, tailor-made etc.
  • Individualised therapies requires; difficult for late phase clinical studies
  • Potentially small market of suitable patients; not fiscally attractive
  • Costs of patents & licenses
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4
Q

What biological barriers are there to gene therapy?

A
  • Many genes may be mutated
  • Variation within tumours; different clones within a tumour
  • Variation between patients
  • Requires majority of cancer cells to be affected; unlike gene therapy for monogenic diseases, e.g. single mutation in an enzyme
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5
Q

Give an example of a proposed miRNA therapy targeting antagomiRs, and what barriers prevent its successful use.

A
  • miRNA usually an important regulating molecule; binds to 3’ UTR of target mRNAs and regulate translation
  • Proposed use of anti-miRs (antagomiRs) to block oncomiR action; antagomiR complementary to oncomiR sequence

Barriers:
• Stability
• Excretion
• Cellular uptake and targeting
• Transient inhibition (rapid mRNA turnover); repeated doses required
• Off target effects; turning off other targets
• RNA v. unstable (lots of RNA enzyme)

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6
Q

Give an example of miRNA therapy involving tumour suppressor miRs, and barriers preventing its successful use.

A
  • To upregulate tumour suppressor miRs
  • Proposed oligonucleotides that would mimic TS miRs (synthetic versions)
Barriers (similar to antagomiRs):
• Stability 
• Excretion
• Cellular uptake and targeting
• Transient inhibition (rapid mRNA turnover); repeated doses required
• Off target effects
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7
Q

What is an example of pro-drug metabolising therapy? Give an example.

A

E.g. Herpes simplex TK (thymidine kinase)
- Phosphorylates pro-drugs such as valaciclovir to toxic nucleosides
- Target to dividing cells using gamma retroviral vector (viruses) or by targeting to cell surface antigen
- Not yet licensed (promising results)
> Activate drug only in vicinity of tumour (reduce systemic effects)
> mAb is conjugated to the pro-drug thus therapy is only targeted at tumour cells

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8
Q

What is an example of viral oncolysis/virotherapy? What is it?

A
  • Viruses which have been engineered only to replicate in cancer cells
    E.g. Adenovirus dl1520, which requires defective p53 pathway; this adenovirus normally inhibits p53 as part of its life cycle
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9
Q

How is the tumour microenvironment targeted? Why is this an advantageous therapy?

A
  • Prevent angiogenesis by modifying normal cells
  • Modify immune response and metastatic potential
    »> Doesn’t require high efficiency of transduction (other therapies target cancer cells themselves; which requires hitting most of them to be successful (success in animal models of viruses expressing angiostatin and endostatin)
    »> Target host not the cancer
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10
Q

How can gene therapy be used to reduce toxicity?

A
  • Effectively increase therapeutic index
  • MGMT gene removes alkylating DNA modifications; which would confer resistance to alkylating agents
    »> Overexpressing MGMT in healthy cells; spared from cytotoxic effect
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11
Q

Describe the new therapy recently developed to treat aggressive ALL (acute lymphoblastic lymphoma) which involves T-cells?

A
  • Donor T-cells taken from a healthy volunteer (unrelated to patient)
  • Genetically modified to attack CD19+ cells; marker of B cells of ALL
  • GM-T cells modified to be resistant to immunotherapy which would otherwise kill T-cells
  • All of patient’s T-cells thus killed but still has GM donor T-cells
    »> Then after therapy own T cells kill GM T-cells (recognised as foreign), leaving patient with self-T cells and no cancer cells.
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12
Q

What are mAbs?

A
  • Proteins produced by immune system to bind specifically to foreign antigens
  • Produced by B lymphocytes
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13
Q

What’s the difference between monoclonal and polyclonal antibodies?

A

Monoclonal Abs:
- Come from a single clone of B lymphocytes, targeting a single epitope (part of the antigen where antibody attaches)

Polyclonal Abs:

  • Come from many clones of B lymphocytes
  • In turn can target multiple epitopes of the antigen (extracted from blood of immunised animals)
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14
Q

What are mAbs used for? Give examples.

A
  • Make cells visible to the immune system
    e. g. against cancer cell markers (rituximab)
  • Stop cells dividing
    e. g. against cancer cell growth factor receptors (cetuximab)
  • Target therapies
    e. g. conjugated to drug or radioisotope (so they can exert their effect in the vicinity of cancer cells only)
  • Diagnosis
    e. g. testing for expression of hormone receptors (HER2)
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15
Q

How does Rituximab work? What is its mode of action an example of?

A
  • mAb that targets CD20 on B cells; recruiting immune cells to cancer e.g. NK (natural killer) cells
  • Causes ADCC (antibody dependent cell mediated cytotoxicity)
  • Causes complement mediated cytotoxicity (CDC); leads to pore in cell wall = cell death
  • Kills B cells in lymphomas/leukaemias (and health B cells that also express CD20; but recovery after)
    »> Makes cells visible to the immune system.
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16
Q

Which mAb is used to conjugate radioisotopes for NHL (Non-Hodgkin’s lymphoma)?

A

• Ibritumomab tiuxetan

Conjugating:

  • yttrium-90
  • indium-111
17
Q

What is ADEPT?

A
  • Antibody directed enzyme pro-drug therapy
  • mAb + enzyme binds to target; pro-drug only activated when near target cells
  • mAb delivers enzyme to cancer cells
18
Q

What characteristics are essential for therapeutic antibody use?

A
  • Good specificity
  • Large quantities
  • Well defined purity; no contamination
19
Q

What were the problems w/early mAbs derived from animal spleen cells?

A
  • Full size antibodies

- Recognised as foreign by patient immune system

20
Q

What are the advantages of using Recombinant mAbs?

A
  • Reduction of immune response problems

- Reduction in size and complexity of antibodies; e.g. can rid of constant region (reducing immune detection)

21
Q

What are the two possibilities of formulating recombinant mAbs to avoid immune response? What are these called?

A

A) Use human antibody but with mouse Fv (variable; light chain to recognise shit) region = Chimeric mAb

B) Use human antibody but with mouse CDR (Complementarity-determining region; most of light chain variable region is human but ‘tips’/business bit is mouse) = ‘Reshapes’ mAb

22
Q

What are the advantages to using ‘reshaped’ human mAbs over Mouse Chimeric mAbs?

A
  • Better
  • But requires adjustment to antibody framework to retain OG antibody “fit”; more difficult to achieve than chimaeric

> > > Anti-idiotype responses cannot be removed by engineering

23
Q

How can completely human mAbs be manufactured?

A
  • Use human lymphocytes rather than mouse/rat to minimise foreign Ab exposure
  • Use genetically modified mice to produce entirely human antibodies (e.g. Panitumumab against EGFR)
  • Use recombinant antibodies .e.g micro-organisms to synthesise mAbs (phage display; viruses infect bacteria, which then generates large quantity of mAb
24
Q

How is the use of human lymphocytes to generate mAbs of limited value?

A
  • Low yield
  • Unreliable
  • Vulnerable to contamination (pathogen/viruses etc.)
  • Ethically limited
25
Q

What does the size/specificity of the Fc (constant) region of an mAb convey?

A
  • Non-specific binding
  • Activation of the immune system
    > Removal of Fc (into antibody fragments) prevents immunological reactions
    »> igG very large + complex molecule; could be smaller and simpler
26
Q

What are the reasons for using antibody fragments? (e.g. removing Fc region/making mAb smaller)

A
  • Smaller molecules extravasate more readily and distribute around the body more rapidly
  • Smaller molecules penetrate through tissues and tumours faster
  • Removal of Fc (constant) functions can remove immunological reactions (double edged sword; not necessarily what you want)
  • Easier to produce by recombinant DNA technology
  • Can reduce production costs; easier to use E. coli or yeast for production rather than mammalian cells (fewer PTMs - post translational modifications)
  • Can be used in constructs which contain additional functionality e.g. ADEPT
27
Q

What are recombinant mAb fragments based on?

A
  • Fab fragment (one arm of variable region)

- Fv fragment (whole variable region; two arms)

28
Q

What are the problems associated with fragments in mAb, and how are they overcome?

A
  • Reduced circulation half-life
    > Controlled through Fc region and sugar residues normally
    > Can modify fragment (e.g. PEGylate) to improve lifespan
  • Loss of immune effector functions
    > E.g. phagocytes, NK cells, complement binding sites
  • Reduced binding activity
    > Reduction in binding site number, effectiveness
    > Constant region (Fc) contributes to antigen binding
29
Q

What are third generation molecules (3G) WRT mAbs, and what is their point?

A
  • Minaturing mAbs by removing non-essential functions
  • SMIPs (small modular immunopharmaceuticals)
  • Retain effector functions (e.g. effector cells, complement binding)
    »> Increased tumour penetration
    e.g. TRU-015, anti-CD20
30
Q

What do cancer vaccines entail? What’s the caveat? How do they work?

A
  • Tumour-associated antigen (TAA) induces an immune response specifically against tumour cells
    »> Difficult as host immune system often compromised (cytotoxic treatment)

• Induction of cytotoxic T lymphocytes

  • TAA expressed on APCs e.g. Provenge
  • Modify tumour cells to act as APCs (antigen presenting cells)
  • CD40L (Ligand), CD80
  • GM-CSF, lymphotactin, IL12, IL2 (proteins that recruit immune cells to cell vicinity)
31
Q

How does Provenge (Sipuleucel-T) carry out its anticancer activity? What is it used to treat?

A

1) Immune cells harvested from patient with prostate CA
2) Centrifuged to separate into monocytes
3) Monocytes combined with PAP marker (prostatic acid phosphatase; cancer specific antigen), as well as GM-CSF (granulocyte-macrophage colony stimulating factor required for maturation of immune cells
4) Modified monocytes cultured for 36-44 hours
5) GM-CSF makes monocytes mature; which become activated APC (antigen presenting cells)
6) Activated APC mimics attenuated virus vibes; but fires off CD4/CD8 T-cells specific to PAP (cancer specific antigen)
7) Prostate tumour cell is murked by T-cells = cell lysis