Module 4 – Biodiversity, evolution and disease Flashcards
C10) What is the meaning of classification
The process of organising living organisms into groups. The organisms within each group share similar features
C10) what is a taxonomic group
Seven groups ordered in hierarchy
Kingdoms are the biggest and broadest taxonomic group and species being the smallest and most specific classification
Hierarchical classification systems are also referred to as linnaean classification proposed by carl Linnaeus
Because of the study of genetic material scientists added domains at the top of the hierarchy
C10) why do scientists classify organisms
To identify species - by using clearly defined systems of classification the species an organism belongs to can be easily identified
To predict characteristics - if several members in a group have a specific characteristic so will others in the same group
To find evolutionary links - species in the same group probably share characteristics because they evolved from a common ancestor
By using a single classification system scientist worldwide can share research. Links between different organisms can be seen even if they live on different continent
C10) How are organisms classified
The classification system begins by separating organisms into three domains- Archaea, bacteria, Eukarya.
As you move down the hierarchy there are more groups at each level but fewer organisms in each group.
The organisms in each group become more specific and share more characteristics
The system ends with organisms being classified as individual species.
C10) what is the definition of species
A group of organisms that are able to reproduce to produce fertile offspring
C10) what are the problems with common names of organisms
They are based on physical characteristics or behaviours.
They are not very useful for scientists working internationally as organisms may have more than one common name and different names in different languages
Common names do not provide information about the relationship between organisms
So we use the binomial naming system
C10) What are the five kingdoms
Prokaryotae
Protoctista - Unicellular eukaryotes
Fungi - yeast, mould and mushrooms
Plantae
Animalia
C10) What are the general features of prokaryotae
Unicellular
No nucleus or other membrane - bound organelles-a ring of naked DNA
No visible feeding mechanism - nutrients are absorbed through the cell walls
C10) what are the General features of protoctista
Unicellular
A nucleus and other membrane-bound organelles
Nutrients are acquired by photosynthesis, digestion of other organisms or both
C10) what are the General features of fungi
Unicellular or multi cellular
A nucleus and other membrane-bound organelles and a cell wall
Nutrients are acquired by absorption mainly from decaying material
C10) what are the general features of plantae
Multi cellular
Enucleation other membrane-bound organelles including chloroplast
Nutrients are acquired by photosynthesis
C10) What are the General features of Animalia
Multi cellular
Enucleation other membrane-bound organelles
Nutrients acquired by ingestion
C10) Why has there been a change in the classification system
Because of the study of genetics
DNA determines the proteins that are made which codes for the organisms characteristics. If the characteristics change then the DNA must have also changed. By comparing the similarities in DNA and proteins of different species scientists can discover relationships between them.
C10) what is the three domains system
Was proposed by carl Woese
Domain was a further level of classification at the top of the hierarchy
Groups organisms using differences in the sequence of nucleotides in the cells ribosomal RNA as well as the cells membrane lipids structure and the sensitivity to antibiotics
Organised into three domains and six kingdoms
C10) What are the three domains
Eukarya
Have a 80s ribozymes and are they polymerise contain 12 proteins
Archaea
Have 70 S ribosomes and RNA polymerase of different organisms containing between 8 and 10 proteins
Bacteria
Have 70 S ribosomes and RNA polymerise contain five proteins
C10) what are the six kingdoms of the three domains system
Eubacteria, Archaebacteria, pritoctista, plantae, fungi, Animalia
C10) what are Eubacteria and Archaebacteria
Eubacteria
Known as true bacteria, found in all environments.
Most bacteria are in this kingdom
Archaebacteria
Known as ancient bacteria, can live in extreme environments.
Including hot thermal vents, anaerobic conditions and highly acidic places
C10) What is Phylogeny and phylogenetics
Phylogeny is the evolution of relationships between organisms
The study of the evolutionary history of groups is known as phylogenetics
C10) how are phylogenetic trees made
Are produced by looking at similarities and differences in species physical characteristics and genetic make up
much in evidence gained from fossil feels
C10) what are the advantages of phylogenetic classification
Phylogeny is done without reference to classification.
Classifications and use knowledge of phylogeny in order to confirm the classification groups are correct or cause them to change
Phylogeny produces a continuous tree whereas classifications required discrete taxonomy groups so scientists are not forced to put organisms into a specific group that they do not fit into
The historic nature of classifications can be misleading as it implies different groups within the same rank are equivalent
C10) how did The theory of evolution develop
Most people believed in the Bible and the creation story
Charles Darwin read a book written by his friend Charles Lyell as a result came up with the idea that evolution was a slow process one in which small changes accumulated over time
Proved this theory using finches in the Galapagos Islands because different finches in different islands had different beaks and claws of different sizes and shapes by observing this he found out that it was linked to the food available on each island
Concluding that a bird born with a beak most suited to the food available would survive longer than a bird who didn’t. Therefore it would have more offsprings passing on the advantages characteristics
A different man called Alfred Wallace had a similar idea and so they both wrote on “the origins of species”
C10) What are the evidence for evolution
Palaeontology: Study of fossil fuels and fossil records
Comparative anatomy: studying of similarities and differences between organisms anatomy
Comparative biochemistry: Similarities and differences between the Chemical make up of an organism
C10) That are the evidence provided by palaeontology
Fossils form over time to make strata. The fossils that are on top are the youngest and the fossils near the bottom of the crust are the oldest therefore showing evolution of organisms
Fossils allow relationships between extinct and living organisms to be investigated
Fossils of simplest organisms like bacteria are found in the oldest rocks while fossils of more complex organisms such as vertebrates are found in more recent rocks supporting the evolutionary theory that simple lifeforms gradually evolved over millions of years to more complex ones
By studying similarities in the anatomy of fossil organisms scientists can show how closely related organisms have evolved from the same ancestry
C10) what are the limits of palaeontology
The fossil records are not completed for example Many softbodied organisms have decomposed before they had a chance to become fossils.
Many fossils have been destroyed by the earths tectonic movements
C10) How has comparative anatomy of homologous structures helped prove evolutionary theory
Homologous structures are structures that appear or function significantly different in different organisms but has the same underlying structure
For example the bone structure of the limbs in the flying vertebra are similar to a walking vertebra or a swimming vertebra but their functions have changed this could be due to being evolved from a common ancestor
Homologous structures provide evidence of divergent Evolution this Describes how different species with a different set of adapted features have evolved from a common ancestor
C10) How has comparative biochemistry helped to prove the evolution theory
Is the study of similarities and differences in the proteins and other chemicals that control life processes.
For example cytochrome C (involved in respiration) and ribosomal RNA
To discover how closely related to species are the molecular sequence is compared by looking at the DNA bases or the order of amino acids. The number of differences that exist are plotted against the rate the molecule undergoes natural base pairs substitution. From this they can estimate the point where the two species shared a common ancestor.
Species who are closely related have similar DNA and proteins whilst distantly related have fewer similarities
C10) What are the two causes of variation
And organisms genetic material – difference in the genetic material of an organism inherited from its parents lead to genetic variation
The environment in which the organism lives - causes environmental variation
C10) what are the two types of variation
Interspecific variation-between members of different species
Intraspecific variation – between organisms within a species
C10) what are three genetic causes of variation
Alleles - Different alleles produce different effects. Individuals in a species population may inherit different alleles of a gene
Meiosis - gametes are produced by meiosis in organisms that break produce sexually. Each gamete receives half the genetic information of a parent cell. Genetic material inherited from the two parents is mixed up by independent Saltman and crossover. Leading to gametes of an individual showing variation
Chance - many different gametes are produced from the parental genome. During sexual reproduction it is the result of chance as to which two combinations-random fertilisation. Individuals produce therefore differ from siblings as each contain a unique combination of genetic material
C10) how can asexual reproduction introduce variation
Asexual reproduction results in the production of clones – individuals that are genetically identical to parents
Genetic variation can only be increased and these organisms as a result of mutation
C10)What are environmental causes of variation
All organisms are affected by the environment in which they live, although plants may be affected to a greater degree than animals due to the lack of mobility
C10) How can Variation be detected
With the use of twins who are split up at birth and sent to different environments
C10) environmental and genetic causes
most cases of variation are caused by a combination of both environmental and genetic factors
For instance the height of a person can be genetic as it can be influenced by your parents height but also environmental as a good diet is needed to grow above average height
C10) what is discontinuous variation
Characteristic that can only result in certain values
No in between value
Variation determined purely by genetic factors Falls into this category.
Normally represented using a bar chart
Controlled by a single gene
C10) what is continuous variation
Characteristic that can take any value within a range
not controlled by a single gene but a number of genes
Also often influenced by environmental factors
Continuous variation data is collected in a frequency table and plotted on a histogram then a curve is drawn onto the graph to show the trend
C10)What is the normal distribution curve
When continuous variation data is plotted onto a graph usually result in the production of a bell shaped curve known as the normal distribution curve
C10) characteristics of a normal distribution
The mean, mode and median are the same
The distribution has a characteristic bell shape, which is symmetrical about the mean
50% of values are less than the mean and 50% or greater than the mean
Most values like close to the mean value - number of individuals are at the extremes are low
C10) what a standard deviation
Is a measure of how spread out the data is
The greater the standard deviation the greater the spread of the data
A characteristic which has a high standard deviation has a large amount of variation
C10) what will you find when you calculate standard deviation of data in a normal distribution curve
68% of values are within one standard deviation of the main
95% of values are within two standard deviations of the main
99.7% of values are within three standard deviations from the mean
C10) what is the students t test
Used to compare the means of data values of two populations
C10) what is the Spearman‘s rank correlation coefficient
Used to consider the relationship between two sets of data
C10) how do you figure out the degree of freedom
(n1-n2)-2
Where n1 = population one, n2 = population 2
C10) what are adaptations
Characteristics that increase in organisms chance of survival and reproduction in its environment
Many adaptations fall into more than one category
C10) what are the different types of adaptations
Anatomical adaptations- physical features, internal and external
Behavioural adaptations- the way an organism acts. This can be innate (instinctive) through genes or learnt from their parents
Psychological adaptations- processes that take place inside an organism
C10) What are some examples of anatomical adaptations
Body covering- animals have a number of different body coverings are such as hair, scales, spines, feathers and shells.
Can help: organisms to fly such as feathers on birds, help to stay warm such as polar bears, provides protection such as snail shells. Thick waxy layer on plants prevent water loss and spikes can deter herbivores and protect the tissue from some damage
Camouflage- the outer colour of an animal allows it to blend into its environment making it harder for predators to spot it.
Teeth- The shape and type of teeth present in an animal jaw are related to its diet. herbivoresSuch as sheep have continuously growing molars for chewing Tough grass and plants. Carnivores have sharp long canines to kill pray and tear meet
Mimicry- copying other animals appearance or sound allows an harmless organism to fool predators into thinking it is poisonous or dangerous
C10) How are marram grass adapted to reduce the rate of transpiration
It’s a Xerophyte, A plant that has adapted to live in an environment with a little water
Curled leaves to minimise the surface area of moist tissue exposed to the air and protect the leaves from the wind
Hairs on the inside surface of the leaves to trap moist air close to the leaf reducing the diffusion gradient
Stomata sank into pits which make them less likely to open and lose water
A thick waxy cuticle on the leaves and stems reducing water loss through evaporation
C10) what are some behavioural adaptations
Survival behaviours- a rabbit freezes when they think they have been seen
Courtship- many animals exhibit elaborate courtship behaviour to attract a mate
Seasonal behaviour-enable organisms to cope with changes in the environment
C10) what are different types of seasonal behaviours
Migration-animal moves from one region to another and then back again when environmental conditions are more favourable. This may be for a better climate or a source of food
Hibernation-a period of inactivity in which an animal‘s body temperature, heart rate and breathing slow down to conserve energy reducing the animals requirement for food
C10) what are some physiological adaptations
Poison production- reptiles produce venom to kill their prey and many plants produce poison in their lives to protect themselves
Antibiotic production– some bacteria produce antibiotics to kill other species of bacteria in the surrounding areas
C10) What are Analogous structures
The tailfin of a whale and a fish perform the same role, when you look at them in detail their structures are very different
They have adapted to perform the same function but have a different genetic origin
C10) what is convergent evolution
When unrelated species begin to share similar traits
Similarities involved because the organism adapt to similar environments or other selection pressures
Can also happen in plant species
C10)What is the meaning of selection pressure
These are factors that affect the organisms chance of survival or reproductive success (the ability to produce fertile offspring)
C10) what are the steps of natural selection
1) organisms within a species show variation in their characteristics that are caused by differences in their genes-new alleles can arise by mutation
2) organisms whose characteristics are best adapted to a selection pressure such as predation, competition or disease have an increased chance of surviving and successfully reproducing. Less well adapted organisms die or failed to reproduce- survival of the fittest
3) Successful organisms pass the allele including the advantages Characteristic onto there offspring. Organisms that possess the non-advantages allele are less likely to successfully pass it on.
4) process is repeated for every generation. Over time the population of individuals with the advantages adaptation increase. Therefore the frequency of the allele that code for these particular characteristics increase in the population gene pool
5) Over many generations and often involving multiple genes this process can lead to the evolution of a new species
C12) what are the different types of pathogens
Bacteria
Viruses
Protista
Fungi
C12) what are the eats to classify bacteria
By their basic shape - they can be rod shaped, spiracle,, shapes, spiralled and corkscrewed
By the cell wall - the two main types of bacteria cell walls have different structures and react differently to gram staining. Gram positive bacteria look purple/blue.. Gram negative bacteria appear red. This is useful because the type of cell walls affects how bacteria react to different antibiotics
C12) what are the properties of viruses
Viruses are nonliving infectious agents with the basic structure of some genetic material surrounded by protein
Viruses invade living cells where the genetic material of the virus takes over the host cell to make more viruses
Viruses reproduce rapidly and evolved by developing adaptations to their hosts making them successful pathogens
C12) what is bacteriophages
They are viruses that attack bacteria by taking over the bacterial cells and using them to to replicate destroying the bacteria at the same time
People have used bacteriophages to identify and treat some diseases
Scientists consider viruses to be the ultimate parasite
C12) what are the properties of Protista
Has a wide variety of feeding methods
Include single celled organisms and cells grouped into colonies
The Protista which cause disease are parasite -they use people animals as the host organism
C12) what are the properties of fungi
Fungal disease is not a big problem for animals but are devastating to plants
Are eukaryotic organisms, often multicellular,
Many fungi are saprophytes meaning they feed on dead and decaying matter but some fungi are parasites feeding on living plants and animals
Parasite bacteria cause communicable diseases because fungal infections often affect the leaves of the plants which stop them photosynthesising leading to killing of the plant
Fungi reproduce with millions of tiny spores which spread huge distancesThis means they can spread widely and rapidly through plant crops
C12) What are the different methods of action for pathogens
Destroying the host tissue directly
producing toxins which damage host tissue
C12) How do you pathogen is damaged the host tissue directly
The viral genetic material gets into the host cell and is inserted into the host DNA. The virus uses the host cells to make new viruses which burst the cell destroying it and then spreading the infection to other cells
Protester take over cells and destroy them open as the new generations emerge but they do not take over the genetic material of the cell. They digests and use the cell contents to reproduce
Fungi digest living cells and destroy them. Combining with the response from the body to the damage, fungi gives symptoms
C12) What are the different plant diseases
Ring rot
Tobacco mosaic virus
Potato blight
Black sigatoka
C12) what are the facts around Ring rot
A bacterial disease caused by gram-positive bacteria
Damages leaves, tubers and fruit
There is no cure, once Ring rot infect a field it cannot be used again for at least two years
C12) What are the facts around tobacco mosaic virus
A virus that infects tobacco plants and around 150 other species
Damages leaves, flowers and fruit.
Stunting growth and reducing yield can lead to total crop lost
Resistant crops trains are available but there is no cure
C12) what are the facts around potato blight
Caused by the fungus like protests.
Damaging leaves, tubers and fruits
No cure but resistant strains, carefully manageable and chemical treatment to reduce infection risk
C12) what are the facts around the black sigatoka
Banana disease caused by fungus
Attacks and destroys the leaves. Digests the cells turning the leaves black.
If plants are infected it can cause a 50% reduction in yield
Resistant strains being developed, good husbandry and fungicide treatment can control the spread of the disease, no cure
C12) What are the Animal diseases
Tuberculosis
Bacterial meningitis
HIV/AIDS
Influenza
Malaria
Ring worm
Athletes foot
C12) what are the facts around tuberculosis
Bacterial disease
Damages and destroys lung tissue and suppresses the immune system, body is less able to fight of other diseases
In people TB is both curable by antibiotics and a preventable by improving living standards and vaccinating
C12) what are the facts around bacterial meningitis
Bacterial infection of the meninges of the brain, can spread into the rest of the body causing septicaemia and rapid death
Affects very young children and teenagers aged 15 to 19
Symptoms, a blotchy red/purple rash that does not disappear when glass is placed against it. This is symptoms of septicaemia.
Antibiotics will cure the disease if delivered early. Vaccines can protect against forms of bacterial meningitis
C12) what are the facts around HIV and AIDS
AIDS is caused by HIV
Target the T-helper cells in the immune system of the body. Gradually destroying the immune system so that person is open to other infections.
HIV/AIDS is a retrovirus with RNA as its genetic material. Contains the enzyme reverse transcription
Past on by bodily fluids
No vaccine and no cure but anti-retroviral drugs slow the progress of the disease
c12) what are the facts around influenza
A viral infection of the ciliated epithelium cells in the gases exchange system
Can be fatal especially to young children and old people and people with chronic illnesses.
Three main strains-A, B and C
A is the most virulent and are classified further by the proteins on the surface
They mutate regularly but the changes are usually small so having flu one year can have some immunity for the next
Sometimes the changes in the surface antigens can lead to a flu epidermic or pandemic
Vulnerable groups are vaccinated annually
No Cure
c12) What are the facts around malaria
Caused by the protoctista and spread by bites of infected mosquitoes
They reproduce inside a female mosquitoes need to take blood for protein before she lays eggs there for passing on the parasite
Invade the red blood cells, liver and even the Brain
No vaccine and limited cause but prevention measures are effective
Mosquitoes can be destroyed by insecticide and removing the standing water they breed in or by using mosquito nets preventing them from biting people and spreading the disease
C12) what are the facts around ring worm
A fungal disease affecting mammals
Different fungi affect a different species
Causes grey-white, crusty, infectious, circular areas ofSkin
Not damaging but looks unsightly and may be itchy
Antifungal creams are effective cures
C12) what are the facts around athletes foot
Human fungal disease
Form of human ringworm that grows on and digests the warm moist skin between the toes
Causes cracking and scaling which is itchy and may become sore
Antifungal cream is effective cure
C12) what are forms of direct transmission of a communicable disease in animals
Direct contact:
Kissing or any contact with bodily fluids from another person (STI)
Direct skin to skin contact (Athletes foot)
Microorganisms from faeces transmitted on the hand (Diarrhoeal disease)
Inoculation:
Through a break in the skin (HIV/AIDS)
From an animal bite (rabies)
Through a punch a wound or sharing of needles (septicaemia)
ingestion:
Taking in contaminated food or drink or transferring pathogens to the mouth from the hands (Diarrhoeal disease)
c12) what are the different indirect transmission pathways of a communicable disease in animals
Fomites:
Inanimate objects such as bedding, socks or cosmetics can transfer pathogens (athletes foot)
Droplet infections:
Miniature droplets of saliva and mucus are expelled from your mouth as you talk, cough or sneeze. Droplets containing pathogens are breathed in my healthy individuals they can become infected (Influenza)
Vectors:
Transmits communicable pathogens from one house to another. Often animals but not always (Mosquitoes transmit malaria)
Water can also act as a vector for diseases (diarrhoeal disease)
C12) what are factors affecting the transmission of communicable diseases in animals
Overcrowded living and working conditions
Poor nutrition
A compromised immune system including having HIV/AIDS or needing immunosuppressant drugs
Poor disposal of waste provide breeding grounds for vectors
Climate change introduced new vectors a new diseases (malaria moving towards the UK due to temperature change)
Culture and infrastructure - in many countries traditional medical practices can increase transmission
Socio-economic factors - a lack of trained health workers and insufficient public warning when there is an outbreak of disease can increase transmission rate